CK933467

Overview
NameCK933467
Unique NameCK933467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13190 contig Csv1_Contig13190:7..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.992e-108
Identity = 199/249 (79.92%), Postives = 207/249 (83.13%), Query Frame = 1
Query:   88 MKLDTSGLESTSPF--FGSGDELCXXXXXXXXXXXXXXTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDDV 828
            MKLDTSGLE+T P   FGS  E+               TDFD FQK     +K AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG RFSVGSGSPYAYGVLDSGYKFDMS+          IYHATFRD ASGGVASVY+VGP GW KLSGDDV
Sbjct:    1 MKLDTSGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQGWTKLSGDDV 249          
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5A_ARATH (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana GN=PBE1 PE=1 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 3.756e-107
Identity = 195/249 (78.31%), Postives = 206/249 (82.73%), Query Frame = 1
Query:   88 MKLDTSGLESTSPF--FGSGDELCXXXXXXXXXXXXXXTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDDV 828
            MKLDTSG E++ P   FGS  ++                +FD FQK  K  LKHAKGTTTLAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG RFSVGSGSPYAYGVLDSGYK+DMS+          IYHATFRD ASGGVASVY+VGP GW KLSGDDV
Sbjct:    1 MKLDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWTKLSGDDV 249          
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 4.906e-107
Identity = 192/247 (77.73%), Postives = 207/247 (83.81%), Query Frame = 1
Query:   88 MKLDTSGLESTSPFFGSGDELCXXXXXXXXXXXXXXTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDDV 828
            MKLDTSGLEST+P F   D +               TDFD FQK+    +K AKGTTTLAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY+YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG RFSVGSGSPYAYGVLD+GYK+DM++          IYHAT+RD ASGGV SVY+VGP+GW+K++GDDV
Sbjct:    1 MKLDTSGLESTAPIFRRSDFVFDGLQMTPSFDLPNPTDFDGFQKEAVQMVKPAKGTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKVTGDDV 247          
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5_MOUSE (Proteasome subunit beta type-5 OS=Mus musculus GN=Psmb5 PE=1 SV=3)

HSP 1 Score: 262.692 bits (670), Expect = 1.822e-69
Identity = 124/193 (64.25%), Postives = 151/193 (78.24%), Query Frame = 1
Query:  250 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDDV 828
            GTTTLAF F  GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L  +CR++EL NK RISV  ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YAYGV+D GY +D+ +          IY AT+RDA SGG  ++Y+V  +GW ++S D+V
Sbjct:   59 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNV 251          
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5_BOVIN (Proteasome subunit beta type-5 OS=Bos taurus GN=PSMB5 PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.822e-69
Identity = 124/193 (64.25%), Postives = 151/193 (78.24%), Query Frame = 1
Query:  250 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDDV 828
            GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L  +CR++EL NK RISV  ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G  FSVGSGS YAYGV+D GY +D+ +          IY AT+RDA SGG  S+Y+V  +GW ++S D+V
Sbjct:   59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNV 251          
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5_PONAB (Proteasome subunit beta type-5 OS=Pongo abelii GN=PSMB5 PE=2 SV=3)

HSP 1 Score: 262.307 bits (669), Expect = 2.380e-69
Identity = 123/193 (63.73%), Postives = 151/193 (78.24%), Query Frame = 1
Query:  250 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDDV 828
            GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L  +CR++EL NK RISV  ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G  FSVGSGS YAYGV+D GY +D+ +          IY AT+RDA SGG  ++Y+V  +GW ++S D+V
Sbjct:   59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNV 251          
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5_HUMAN (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3)

HSP 1 Score: 262.307 bits (669), Expect = 2.380e-69
Identity = 123/193 (63.73%), Postives = 151/193 (78.24%), Query Frame = 1
Query:  250 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDDV 828
            GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L  +CR++EL NK RISV  ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G  FSVGSGS YAYGV+D GY +D+ +          IY AT+RDA SGG  ++Y+V  +GW ++S D+V
Sbjct:   59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNV 251          
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5_RAT (Proteasome subunit beta type-5 OS=Rattus norvegicus GN=Psmb5 PE=1 SV=3)

HSP 1 Score: 261.536 bits (667), Expect = 4.060e-69
Identity = 123/193 (63.73%), Postives = 152/193 (78.76%), Query Frame = 1
Query:  250 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDDV 828
            GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L  +CR++EL NK RISV  ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YA+GV+D GY +D+ +          IY AT+RDA SGG  ++Y+V  +GW ++S D+V
Sbjct:   59 GTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNV 251          
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5_DICDI (Proteasome subunit beta type-5 OS=Dictyostelium discoideum GN=psmB5 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.228e-67
Identity = 120/197 (60.91%), Postives = 153/197 (77.66%), Query Frame = 1
Query:  235 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDD 825
            L+ A GTTTLAF++  G++V+ DS+++ G Y++S+SVKK+IEI P +LGTMAGGAADC FW R LG +CRL+EL NK  ISV  ASK+LANI+YSY+G GLS+GTMI GWD+TGP LYYVD++G RL G RFS GSGS YAYGVLD+G+K+DM+           +YHAT RDA SGG  +VY+V  +GW+K+S DD
Sbjct:   57 LEFAHGTTTLAFVYGGGIIVSVDSKSTQGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASKILANIVYSYKGYGLSMGTMITGWDKTGPQLYYVDNDGTRLHGQRFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAINVYHVQKDGWKKISSDD 253          
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB5_CHICK (Proteasome subunit beta type-5 (Fragment) OS=Gallus gallus GN=PSMB5 PE=2 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 2.305e-64
Identity = 120/193 (62.18%), Postives = 144/193 (74.61%), Query Frame = 1
Query:  250 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKLSGDDV 828
            GTTTLAF F  GV+VA DSRA+ G YI+SQ+V+K+IEINP +LGTMAGGAADC FW R L  +CR++EL NK  ISV  ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G  F+VGSGS YAYGVLD G + DM+           I+ A  RDA SGG  +VY+VGP GW ++S  DV
Sbjct:   55 GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRRVSSHDV 247          
The following BLAST results are available for this feature:
BLAST of CK933467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
PSB5B_ARATH1.992e-10879.92Proteasome subunit beta type-5-B OS=Arabidopsis th... [more]
PSB5A_ARATH3.756e-10778.31Proteasome subunit beta type-5-A OS=Arabidopsis th... [more]
PSB5_SPIOL4.906e-10777.73Proteasome subunit beta type-5 OS=Spinacia olerace... [more]
PSB5_MOUSE1.822e-6964.25Proteasome subunit beta type-5 OS=Mus musculus GN=... [more]
PSB5_BOVIN1.822e-6964.25Proteasome subunit beta type-5 OS=Bos taurus GN=PS... [more]
PSB5_PONAB2.380e-6963.73Proteasome subunit beta type-5 OS=Pongo abelii GN=... [more]
PSB5_HUMAN2.380e-6963.73Proteasome subunit beta type-5 OS=Homo sapiens GN=... [more]
PSB5_RAT4.060e-6963.73Proteasome subunit beta type-5 OS=Rattus norvegicu... [more]
PSB5_DICDI2.228e-6760.91Proteasome subunit beta type-5 OS=Dictyostelium di... [more]
PSB5_CHICK2.305e-6462.18Proteasome subunit beta type-5 (Fragment) OS=Gallu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004285_B07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933467 ID=CK933467; Name=CK933467; organism=Citrus sinensis; type=EST; length=829bp
GGGGATTCTCACTGCAGCTTTTATGCTCGATTTCTGCTTGCAACTCTCAG
TTACATTGTCGTTTAATCTTATATTCAGTGCGTAGACATGAAGCTCGACA
CTAGCGGTCTTGAGTCCACTTCTCCTTTTTTCGGGTCAGGCGACGAGCTC
TGTCCTGAGTTATCAGCTGCACCATCATTTTCTCCACCTCTTTCTACTGA
TTTTGATGAATTTCAAAAGGACACTAAAGCTACACTGAAGCATGCCAAGG
GGACAACCACACTTGCTTTTATCTTTAAAGAGGGTGTTATGGTGGCTGCT
GATTCTCGAGCTAGCATGGGAGGCTATATCTCATCTCAGTCTGTGAAGAA
AATTATAGAAATCAATCCTTACATGCTTGGCACAATGGCTGGAGGAGCAG
CCGATTGCCAGTTTTGGCACAGAAATCTGGGCATTAAGTGCCGACTACAT
GAATTGGCCAACAAGCGTAGAATTTCAGTTACAGGGGCATCAAAGCTGCT
GGCCAACATTCTCTACTCTTATCGTGGAATGGGGTTGTCTGTTGGGACTA
TGATTGCTGGATGGGATGAGACTGGTCCTGGGCTGTATTATGTGGACAGT
GAAGGAGGGAGGCTCAAAGGAACACGGTTCTCTGTGGGATCAGGTTCACC
ATATGCTTATGGTGTATTGGACAGCGGGTACAAGTTTGACATGTCTATTG
AAGAAGCTGCGGAGTTGGCTAGAAGAGCTATTTATCATGCGACATTCAGA
GATGCAGCCAGTGGTGGTGTTGCAAGCGTTTATTATGTGGGACCAAATGG
ATGGGAGAAGCTGTCTGGTGATGATGTTG
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