CK933478 | Citrus Genome Database

Overview


Name	CK933478
Unique Name	CK933478
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	795

Libraries


Library Name	Type
Developing fruit juice sac at 38 DAFB	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CK933478_ssr410	microsatellite	CK933478_ssr410:410..427.	BLAST: Citrus ESTs to Prunus persica proteins V1
CK933478_ssr89	microsatellite	CK933478_ssr89:89..100.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10612	contig	Csv1_Contig10612:28..822.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Properties


Property Name	Value
Genbank description	CGF1004285_B03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_B03 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK933478 ID=CK933478; Name=CK933478; organism=Citrus sinensis; type=EST; length=795bp
GGGGACATGTATGTCCCCAACTGCTAAAGCTAAAACCTCTAACTATTTTC
TTTGATATCTCTTCTTTTCATTTCCTTAATTTCTCTCCTTCTTTCTTTCT
TCATTGTTGTTGACTTCTTGTTGTCCTACAACCTCGATCGATTTCAACTT
GAACTTGCACTTGATCAATCATCGTGATGATGTTAAAGGGGAGGAGGCCT
ATATTCCTGGTCTTGGTGATTTTATTTTCCAATATAATTCATTTTTCAAG
CATGGTGATGGTTGTGGCAGTAAGGATGGAGTTGATTCACCGGCATTCAC
CTAAGCTCAATAATATGCCTATGATGAGTGAAGTTGAGCGGATGAAAGAG
CTTCTCCACAATGATATTATTCGTCAAAACAAACGCCGGGGGCGGCGACT
AAGACAAACTAATAATAATAATAATAATGGTGCGAGTGGTAGTGCGATTG
AAATGCCATTGCAGGCGGGCAGAGATTACGGAACAGGGATGTACTTCGTG
GAGATTAAAGTTGGAACTCCATCACAAAAGCTTAGGTTGATTGTGGATAC
GGGAAGTGAGTTCAGTTGGATTAGTTGCAGATACCATTGTGGTCCTAGTT
GTACCAAGAAAGGGACAATAGCCGGCAGTCGAAGACGGGTGTTTAAGGCT
GATCTTTCCTCTTCATTCAAAACAATCCCTTGTTCTTCTGATATGTGCAA
GTCTGAGTTCGCAAGACTCTTCTCTCTCACTTTTTGCCCCACTCCCACGA
GCCCCTGTGCCTATGNNNACAGGTACGCAGACGGGTCAGCTGCAA