CK933484

Overview
NameCK933484
Unique NameCK933484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5664 contig Csv1_Contig5664:32..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 375.17 bits (962), Expect = 2.634e-103
Identity = 181/253 (71.54%), Postives = 208/253 (82.21%), Query Frame = 3
Query:  111 MVKMSLIFSLFVGLLMV----GLVSSAKFDDLYQTSWAFNHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTL 857
            MV M L   + + +++V      VS AKFD+LY++SWA +H   +G+  KL LDNYSGAGF S+SKYLFGKVSIQIKLV GDSAGTVTAFYMSSDGPNHNE DF FLGNTTGEPY+VQTN+YVNGVGNREQRL+LWFDPT EFHTYS+LW++R VVF+VDETPIRV  NLE KGIPF KDQAMGVYSSIWNADDWATQGG VKTDWSHAPFVASYK F+IDACE P +     +  KC  + +++FWWDEPT+
Sbjct:    1 MVGMDLFKCVMMIMVLVVSCGEAVSGAKFDELYRSSWAMDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTT----DLSKC--NGDQKFWWDEPTV 247          
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.474e-74
Identity = 131/226 (57.96%), Postives = 165/226 (73.01%), Query Frame = 3
Query:  180 KFDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEP 851
            +F   Y  +WAF+H++Y   G  ++L+LD Y+G GF SK  YLFG  S+ IK+V GDSAGTVTAFY+SS    H+E DF FLGN TG+PY++QTNV+  G G+REQR+ LWFDPTKE+H YS+LWN  Q+VF VDE PIRV  N +  G+ FP DQ M +Y+S+WNADDWAT+GG  KTDWS APF+A+YKGF ID CE  ASV    NAK C +  ++  WWD+P
Sbjct:   32 QFGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCE--ASV----NAKFCDTQGKR--WWDQP 249          
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.101e-72
Identity = 134/252 (53.17%), Postives = 173/252 (68.65%), Query Frame = 3
Query:  135 SLFVGLLMVGLVSSA-----------KFDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEP 851
            SL+  L+++ L S++            F   Y  +WAF+H++Y   G  ++L+LD Y+G GF SK  YLFG  S+ IKLV GDSAGTVTAFY+SS    H+E DF FLGN TG+PY++QTNV+  G G+REQR+ LWFDPT ++H YS+LWN  Q+VF VD+ PIRV  N    G+ FP +Q M +Y+S+WNADDWAT+GG  KTDWS APF+ASYKGF ID CE  ASV    NAK C +  ++  WWD+P
Sbjct:    4 SLWTCLILLSLASASFAANPRTPIDVPFGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCE--ASV----NAKFCDTQGKR--WWDQP 247          
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.558e-71
Identity = 125/220 (56.82%), Postives = 161/220 (73.18%), Query Frame = 3
Query:  195 YQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDE 848
            Y  +WAF+H++Y   G  + L LD Y+G GF SK  YLFG  S+ IK+V GDSAGTVTAFY+SS    H+E DF FLGN TG+PY++QTNV+  G GNREQR++LWFDP+K++H+YS+LWN  Q+VF VD+ PIRV  N +  G+ FP +Q M +YSS+WNADDWAT+GG  KT+W  APFVASY+GF +D CE  ASV    NAK C +  ++  WWD+
Sbjct:   36 YFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCE--ASV----NAKFCETQGKR--WWDQ 247          
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.658e-71
Identity = 125/225 (55.56%), Postives = 161/225 (71.56%), Query Frame = 3
Query:  183 FDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEP 851
            FD  Y  +WA +H+ Y   G  ++L+LD  +G GF ++  YLFG  S+ IKLVGGDSAGTVTAFY+SS    H+E DF FLGN TG+PY++QTNV+  G G+REQR+ LWFDPTK++H+YS+LWN   + F VD+TPIRV  N +  G+ +P DQ M +YSS+WNADDWAT+GGR KTDWS APFVASY+GF +D CE  A       AK C++   +  WWD+P
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASA------EAKFCATQGAR--WWDQP 248          
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.534e-71
Identity = 133/250 (53.20%), Postives = 172/250 (68.80%), Query Frame = 3
Query:  138 LFVGLLMVGLVSSA-----------KFDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDE 848
            L + L++V L SSA            F   Y  +WAF+H++Y   G  ++L+LD Y+G GF +K  YLFG  S+ IK+V GDSAGTVTAF +SS    H+E DF FLGN TG+PY++QTNV+  G G+REQR+ LWFDPTK +H YS+LWN  Q+VFLVD  PIRV  NL+  G+ FP +Q M VY+S+WNADDWAT+GG  KTDWS APFVA YKGF +D CE  ASV    N++ C++  ++  WWD+
Sbjct:    6 LILCLVLVSLASSALCAAPRRPVDVPFGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCE--ASV----NSRFCATQGKR--WWDQ 247          
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 9.454e-69
Identity = 121/237 (51.05%), Postives = 164/237 (69.20%), Query Frame = 3
Query:  111 MVKMSLIFSLFVGLLMVGLVSSAKFDDLYQTSWAFNH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCS 815
            ++  +++ +L V + M G   S  F++ +  +W  +   +   G  L L+LD  SG+GF SK +YLFG++ +Q+KLV G+SAGTVTA+Y+SS+GP H+E DF FLGN TG+PY++ TNV+  G GNREQ+  LWFDPTK FHTYSL+W  + ++F+VD  PIRV  N E  G+PFPK+Q M +YSS+WNADDWAT+GG VKTDWS APF A Y+GF   AC   +  +  D   K S
Sbjct:    4 ILNRTVLMTLLV-VTMAGTAFSGSFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSS 239          
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.045e-67
Identity = 126/250 (50.40%), Postives = 168/250 (67.20%), Query Frame = 3
Query:  126 LIFSL-FVGLLMVGLVSSAK------FDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDE 848
            L+FS+  + L ++GL    +      F   Y+ SWA +H++Y   G T+ L LD  SGAGF SK  YLFG  S+++KLVGGDSAG VTAFY+SS+   H+E DF FLGN TG+PY++QTNV+  G G+REQR+ LWFDPTK +H+YS+LWN  Q+V  VD+ PIR   N +  G+ FP +Q M +YSS+W+ADDWAT+GG  KTDWS+APF ASY  F +D CE     A     + C++   +  WWD+
Sbjct:    6 LLFSIVLINLSLLGLCGYPRKPVDVPFWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCE----AATPQEVQVCNTKGMR--WWDQ 249          
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.775e-67
Identity = 129/244 (52.87%), Postives = 163/244 (66.80%), Query Frame = 3
Query:  138 LFVGLLMVGLVSSAKFDDL-----YQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDE 848
            L V   MV  +   K  D+     Y  +WAF+H +    G  L+L LD Y+G GF SK  YLFG  S+ IKL  GD+AG VTAFY+SS    H+E DF FLGN TG+P ++QTNV+  G GNREQR+ LWFDP+K +HTYS+LWN  Q+VF VD  PIR   N +  G+ FP +Q M +YSS+WNADDWAT+GG  KT+W++APFVASYKGF ID C+  ASV     AK C++  + R WWD+
Sbjct:   15 LMVSSTMVMAIPPRKAIDVPFGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQ--ASV----EAKYCAT--QGRMWWDQ 250          
BLAST of CK933484 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.509e-66
Identity = 122/220 (55.45%), Postives = 156/220 (70.91%), Query Frame = 3
Query:  195 YQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNESDFVFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDE 848
            Y  +WAF+H +    G  L+L LD Y+G GF SK  YLFG  S+ IKL  GD+AG VTAFY+SS    H+E DF FLGN TG+P ++QTNV+  G GNREQR+ LWFDP+K +HTYS+LWN  Q+VF VD  PIRV  N +  G+ FP +Q M +YSS+WNADDWAT+GG  KT+W++APF+ASY+GF ID C+  ASV     AK C++  + R WWD+
Sbjct:   38 YVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQ--ASV----EAKYCAT--QGRMWWDQ 249          
The following BLAST results are available for this feature:
BLAST of CK933484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH9_ARATH2.634e-10371.54Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_SOYBN7.474e-7457.96Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN4.101e-7253.17Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH5_ARATH1.558e-7156.82Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT2.658e-7155.56Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN4.534e-7153.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH9.454e-6951.05Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC1.045e-6750.40Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH6.775e-6752.87Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_BRAOB1.509e-6655.45Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004285_A01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933484 ID=CK933484; Name=CK933484; organism=Citrus sinensis; type=EST; length=859bp
GGGGACAGATCAGCATTTCAAAGTAGAAGCTTCAACTTCCCTCCACTTCA
CTGGGCCTGCTCTGCTCATTCGCTTACTTCCTCTCCCCGTTCTTCTGTCT
TCATTCTTCAATGGTTAAAATGTCTTTGATTTTCAGTCTGTTTGTGGGTC
TTTTAATGGTAGGTTTGGTCAGCTCAGCTAAGTTTGATGACCTTTATCAA
ACAAGCTGGGCATTTAATCATGTTCAGTATGATGGGGACACTCTCAAGCT
TAACCTCGATAATTATTCCGGAGCTGGGTTTGCGTCAAAGAGCAAGTATT
TGTTTGGGAAAGTCTCCATCCAAATTAAACTTGTAGGGGGTGACTCTGCT
GGAACTGTCACTGCCTTCTATATGTCATCAGACGGTCCAAATCACAACGA
GTCCGATTTTGTGTTCCTGGGGAACACTACAGGAGAGCCATACTTAGTCC
AAACCAATGTTTATGTGAATGGTGTGGGCAACAGAGAGCAGAGACTTGAC
CTCTGGTTCGACCCAACAAAGGAATTTCATACCTATTCCCTCCTTTGGAA
CCAGCGCCAAGTTGTATTTTTGGTGGATGAGACCCCAATTAGAGTGCACA
CTAACTTGGAGCACAAAGGAATTCCCTTCCCAAAGGACCAAGCCATGGGT
GTGTACAGTTCAATATGGAATGCTGATGACTGGGCCACACAGGGGGGAAG
GGTCAAGACGGACTGGAGCCATGCACCTTTTGTTGCATCATACAAGGGCT
TTGAAATTGATGCATGTGAGTGCCCAGCGTCGGTTGCAGGTGCCGACAAT
GCCAAAAAATGCAGCAGCAGTGCTGAGAAAAGGTTCTGGTGGGATGAGCC
AACATTGTC
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