CK933518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933518 vs. ExPASy Swiss-Prot
Match: SBNO1_MOUSE (Protein strawberry notch homolog 1 OS=Mus musculus GN=Sbno1 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.109e-24 Identity = 79/254 (31.10%), Postives = 126/254 (49.61%), Query Frame = 3 Query: 9 QNRLFELFISILDLLVQNARIEGNLDSGIVDMKANI--IELQGTPKTVHVDNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIVRPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDEYEVSSKQCMHG------PKCKLANYCTVGRRIQEVNVLGGLILPVWGTIEKALSKQARQSHKRLRVVRLETTADNKRIVGLLVPNAAVETVLQDLA 746 QN LF+ F L +VQNA+ G D GI+D+ + + K + + L+T +++RG++WE A+ E L P+DGFY S + ++ IL E ++ I RP G+ L+ A+LK KY+K+ S + A W D+Y S+ C H K L C +G R + VL G +L VW +E L+ ++ ++++VRL T D +RIVGL++P V ++ L+ Sbjct: 1115 QNALFQYFADTLTAVVQNAKKSGRYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAE-----LTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLIYRPNTGKQLKLEIYADLKKKYKKVVS-DDALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLA-SVSGTNVKMQIVRLR-TEDGQRIVGLIIPANCVSPLVNLLS 1360
BLAST of CK933518 vs. ExPASy Swiss-Prot
Match: SBNO1_HUMAN (Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.109e-24 Identity = 78/254 (30.71%), Postives = 126/254 (49.61%), Query Frame = 3 Query: 9 QNRLFELFISILDLLVQNARIEGNLDSGIVDMKANI--IELQGTPKTVHVDNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIVRPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDEYEVSSKQCMHG------PKCKLANYCTVGRRIQEVNVLGGLILPVWGTIEKALSKQARQSHKRLRVVRLETTADNKRIVGLLVPNAAVETVLQDLA 746 QN LF+ F L +VQNA+ G D GI+D+ + + K + + L+T +++RG++WE A+ E L P+DGFY S + ++ IL E ++ + RP G+ L+ A+LK KY+K+ S + A W D+Y S+ C H K L C +G R + VL G +L VW +E L+ ++ ++++VRL T D +RIVGL++P V ++ L+ Sbjct: 1118 QNALFQYFADTLTAVVQNAKKNGRYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAE-----LTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVS-DDALMHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLA-SVSGTNVKMQIVRLR-TEDGQRIVGLIIPANCVSPLVNLLS 1363
BLAST of CK933518 vs. ExPASy Swiss-Prot
Match: SBNO1_RAT (Protein strawberry notch homolog 1 OS=Rattus norvegicus GN=Sbno1 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 9.154e-24 Identity = 78/254 (30.71%), Postives = 126/254 (49.61%), Query Frame = 3 Query: 9 QNRLFELFISILDLLVQNARIEGNLDSGIVDMKANI--IELQGTPKTVHVDNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIVRPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDEYEVSSKQCMHG------PKCKLANYCTVGRRIQEVNVLGGLILPVWGTIEKALSKQARQSHKRLRVVRLETTADNKRIVGLLVPNAAVETVLQDLA 746 QN LF+ F L +VQNA+ G D GI+D+ + + K + + L+T +++RG++W+ A+ E L P+DGFY S + ++ IL E ++ I RP G+ L+ A+LK KY+K+ S + A W D+Y S+ C H K L C +G R + VL G +L VW +E L+ ++ ++++VRL T D +RIVGL++P V ++ L+ Sbjct: 994 QNALFQYFADTLTAVVQNAKKNGRYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWDEATKIWAE-----LTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLIYRPNTGKQLKLEIYADLKKKYKKVVS-DDALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLA-SVSGTNVKMQIVRLR-TEDGQRIVGLIIPANCVSPLVNLLS 1239
BLAST of CK933518 vs. ExPASy Swiss-Prot
Match: SBNO_DROME (Protein strawberry notch OS=Drosophila melanogaster GN=sno PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.561e-23 Identity = 85/279 (30.47%), Postives = 139/279 (49.82%), Query Frame = 3 Query: 6 IQNRLFELFISILDLLVQNARIEGNLDSGIVDMKA---NIIELQGTPKTVHVDNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILA--FESTAASG----------------------MYKIVRPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDEYEVSSKQCMHG---PKCK---LANYCTVGRRIQEVNVLGGLILPVWGTIEKALSKQARQSHKRLRVVRLETTADNKRIVGLLVPNAAVETVLQDL 743 +QNRLF+ F + ++Q A+ G D GI+D+ A N+ ++ + V A T + T ++RG+ W+ A K + L + N+GFY S + +R I+ ES +S M +I RP G +R L EL+ KYRK++S E+A W ++Y+ S C H C+ L N C VG R + +VL G +L VWG +E L+ +S+ +++V+R++TT + ++IVG L+P + E ++ DL Sbjct: 1554 LQNRLFKYFTDTMTAIIQQAKRGGRFDLGILDLGAAGENVTRVR-LIRFVRKHATGVAPTEMHTVRVERGMIWQEAIDKYAD-----LFNENEGFYLSHQLRNQKRTAIMVVILESRNSSSTSSTTDLDSGSKKKKTHSKKEIMCQIYRPNTGLQVRHESLFELEKKYRKVAS-EEAEPHWTEQYDASVNTCSHAYWNGNCRNVSLGNDCEVGLRQRLYHVLAGSVLSVWGRVEHILN---TRSNSKMQVIRMKTT-EGEKIVGTLIPKSCFEPLVADL 1821
BLAST of CK933518 vs. ExPASy Swiss-Prot
Match: SBNO2_MOUSE (Protein strawberry notch homolog 2 OS=Mus musculus GN=Sbno2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.560e-22 Identity = 76/254 (29.92%), Postives = 124/254 (48.82%), Query Frame = 3 Query: 9 QNRLFELFISILDLLVQNARIEGNLDSGIVDMKANIIELQGTPKTVHV---DNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIVRPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDEYEVSSKQCMH---GPKCKL---ANYCTVGRRIQEVNVLGGLILPVWGTIEKALSKQARQSHKRLRVVRLETTADNKRIVGLLVPNAAVETVLQDL 743 QN LF+ F D L++ + EG D GI+D+ I E+ + V + G ++DRG+ WE A T+ E L P DGFY S + + +LA ++ + + +P +G + L L K+ +++ +E+AR WE Y +S + C H +C+L C G R++ +L G +L VWG I ++ + S+ L++VRL+ T D K+ VG+ +P V VLQ+L Sbjct: 974 QNALFQYFSDTFDHLIEIDKKEGRYDMGILDLAPGINEIHEESQQVFLAPGHPQDGQVVFYKQISVDRGMKWEEALTRSLE-----LKGPYDGFYLSYKVRGSKMSCLLAEQNRGE--YFTVYKPNIGRQSQLETLDSLCRKFHRVT-VEEAREPWESSYALSLEHCSHTTWNQRCRLTQEGKCCAQGLRLRHHYMLCGALLRVWGRIAAVMADVSSSSY--LQIVRLK-TKDKKKQVGIKIPEGCVHRVLQEL 1216
BLAST of CK933518 vs. ExPASy Swiss-Prot
Match: SBNO2_HUMAN (Protein strawberry notch homolog 2 OS=Homo sapiens GN=SBNO2 PE=2 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 1.119e-21 Identity = 74/253 (29.25%), Postives = 124/253 (49.01%), Query Frame = 3 Query: 9 QNRLFELFISILDLLVQNARIEGNLDSGIVDMKANIIELQGTPKTVHV--DNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIVRPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDEYEVSSKQCMHGP---KCKLANY---CTVGRRIQEVNVLGGLILPVWGTIEKALSKQARQSHKRLRVVRLETTADNKRIVGLLVPNAAVETVLQDL 743 QN LF+ F D L++ + EG D GI+D+ I E+ + V + + + + ++DRG+ WE A K L P DGFY S + + +LA ++ + + +P +G + L L+ K+ ++++ E+A+ WE Y +S C H C+LA C G R++ +L G +L VWG I ++ + S+ L++VRL+T D K+ VG+ +P V VLQ+L Sbjct: 980 QNALFQYFSDTFDHLIEMDKREGKYDMGILDLAPGIEEIYEESQQVFLAPGHPQDGQVVFYKISVDRGLKWEDAFAK-----SLALTGPYDGFYLSYKVRGNKPSCLLAEQNRGQ--FFTVYKPNIGRQSQLEALDSLRRKFHRVTA-EEAKEPWESGYALSLTHCSHSAWNRHCRLAQEGKDCLQGLRLRHHYMLCGALLRVWGRIAAVMADVSSSSY--LQIVRLKTK-DRKKQVGIKIPEGCVRRVLQEL 1221
BLAST of CK933518 vs. ExPASy Swiss-Prot
Match: SBNO2_BOVIN (Protein strawberry notch homolog 2 OS=Bos taurus GN=SBNO2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.473e-21 Identity = 73/253 (28.85%), Postives = 122/253 (48.22%), Query Frame = 3 Query: 9 QNRLFELFISILDLLVQNARIEGNLDSGIVDMKANIIELQGTPKTVHV--DNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIVRPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDEYEVSSKQCMH---GPKCKLANY---CTVGRRIQEVNVLGGLILPVWGTIEKALSKQARQSHKRLRVVRLETTADNKRIVGLLVPNAAVETVLQDL 743 QN LF+ F D L+ + EG D GI+D+ I E+ + V + + + + ++DRG+ WE A + E L +DGFY S + + +LA ++ ++ + +P +G + L L ++R++++ E+AR WE Y S C H C+L C G R++ +L G +L VWG I ++ S+ L++VRL+T D K+ VG+ +P V VLQ+L Sbjct: 987 QNALFQYFSDTFDHLIAADKREGKYDMGILDLAPGIDEIYEESQQVFLAPGHPQDGQVVFYKISVDRGLKWEEAYARSLE-----LTGTHDGFYLSYKVRGNKPSCLLAQQNRGK--LFTVYKPNIGRQSQLESLDSLSRRFRRVTA-EEAREPWESSYTFSLTHCSHTTWNRHCRLVQEGKDCAQGLRLRHHYMLCGALLRVWGRIAAVMADVTSSSY--LQIVRLKTK-DKKKQVGIKIPEVCVRRVLQEL 1228 The following BLAST results are available for this feature:
BLAST of CK933518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933518 ID=CK933518; Name=CK933518; organism=Citrus sinensis; type=EST; length=852bpback to top |