CK933530

Overview
NameCK933530
Unique NameCK933530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933530 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 5.020e-14
Identity = 64/208 (30.77%), Postives = 99/208 (47.60%), Query Frame = 1
Query:   46 MKTSLVTTLSFL----ILALTTKPQLGASES--EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK-NGQ--CPTNVIQLSPKDKRGKNLVLLP-NDNSIIVRESTNIKLKFSRVSSLQQCNRNSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIAHCXPPVNGSCDTLCKDVGV 621
            MK   + +LSF     +LA    P L A++S   P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P N    +VR ST++ + FS     +  + +++W++D  + S G+ F+TIG  K      T  + FK+E+   S F           YK+  C P V GSC   C DVG+
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTS-STVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFC-PTVCGSCKVKCGDVGI 193          
BLAST of CK933530 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13
Identity = 56/201 (27.86%), Postives = 99/201 (49.25%), Query Frame = 1
Query:   46 MKTSLVTTLSFLILALTTKPQ---LGASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTNVIQLSPKDKRGKNLVLLPNDN-SIIVRESTNIKLKFSRVSSLQQCNRNSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIAHCXPPVNGSCDTLCKDVG 618
            MKT+  T +  L+ A T+K     +  + + P+LD  G+++ +  +YY++S++ G   GGG++  +     CP  V+Q       G  ++    D+   +VR ST++ ++F  +   + C+ +++W++DN + S GK ++T    K      T  + FK+EK                 YK   C P V  SC TLC D+G
Sbjct:    1 MKTA--TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFC-PSVCDSCTTLCSDIG 184          
BLAST of CK933530 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 1
Query:  115 ASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTNVIQLSPKD-KRGKNLVLLP---NDNSIIVRESTNIKLKFSRVSSLQQCNRNSLWKVDNDNASLGKQFITIGE-GKTCQNLFKLEKVSASIFDMKI 531
            AS   P+LD+ G++V +   YY+VSA+WG   GG   A      +C T+VI +SP D   G  + + P   +  S +V  ST    +F+ +++ + C  N  W + +D+AS G+ F+  GE      N FK+E V A++   K+
Sbjct:   37 ASSETPVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVI-VSPNDLDNGDPITITPATADPESTVVMASTYQTFRFN-IATNKLCVNNVNWGIQHDSAS-GQYFLKAGEFVSDNSNQFKIELVDANLNSYKL 177          
The following BLAST results are available for this feature:
BLAST of CK933530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MIRA_RICDU5.020e-1430.77Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC5.551e-1327.8621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
SPOR1_IPOBA3.046e-1133.33Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCGF1004284_D12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IIIF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933530 ID=CK933530; Name=CK933530; organism=Citrus sinensis; type=EST; length=626bp
GGGGATCACAAAACCCTTTTCAGTTACCTCAAAAAAAATAAACAAATGAA
GACTTCCTTAGTAACAACACTCTCCTTCCTTATACTTGCTTTGACCACAA
AACCTCAGTTGGGCGCCTCAGAATCTGAACCTATCTTAGATGTCTATGGC
AACCAGGTGGACTCCAGCCACAGGTATTATCTTGTCTCAGCACTCTGGGG
AGTTAAAACCGGCGGTGGAATTAGCGCGGACAAAGGCAAAAATGGACAGT
GTCCAACGAATGTTATCCAATTAAGTCCTAAGGACAAAAGGGGAAAGAAT
TTAGTTTTACTTCCGAATGACAATTCCATAATTGTCCGGGAGTCCACTAA
TATTAAATTGAAATTCTCAAGAGTTTCTTCTCTTCAGCAGTGTAACAGAA
ATTCGTTGTGGAAAGTTGACAACGATAACGCTTCATTAGGAAAGCAGTTT
ATAACAATCGGTGAAGGTAAAACGTGTCAAAATTTGTTTAAACTTGAGAA
AGTTAGTGCATCAATATTTGATATGAAAATAGCACTAGACATTCCCTGTC
TATACAAAATTGCTCATTGTNNNCCACCTGTTAATGGTTCTTGTGATACA
CTCTGCAAAGACGTTGGCGTTTCTAA
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