CK933536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933536 vs. ExPASy Swiss-Prot
Match: ZN363_HUMAN (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33 Identity = 64/165 (38.79%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 202 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCDVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXXNFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFETRQDVIVLPCGHTXXKNC 696 GC+HY R C ++APCC++++ CR CH D H + R +V +V C C Q QQ C C GEY+C+ C LFD D KKQYH +FFHC KC C +M L+ H C+E +CP+C E + +R VLPCGH + C Sbjct: 19 GCEHYDRGCLLKAPCCDKLYTCRLCH---------DNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGICRIGPKEDFFHCLKCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTC 172
BLAST of CK933536 vs. ExPASy Swiss-Prot
Match: ZN363_MOUSE (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32 Identity = 62/165 (37.58%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 202 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCDVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXXNFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFETRQDVIVLPCGHTXXKNC 696 GC+HY R C ++APCC++++ CR CH D H + R +V +V C C Q QQ C +C GEY+C C LFD D K+QYH +FFHC KC C + L+ H C+E +CP+C E + +R VLPCGH + C Sbjct: 19 GCEHYDRACLLKAPCCDKLYTCRLCH---------DTNEDHQLDRFKVKEVQCINCEKLQHAQQTCEDCSTLFGEYYCSICHLFDKD--KRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTC 172
BLAST of CK933536 vs. ExPASy Swiss-Prot
Match: YERG_SCHPO (Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe GN=SPAC2F3.16 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32 Identity = 64/186 (34.41%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 145 ESTNHNGSTELLRKGFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCDVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXX--NFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFETRQDVIVLPCGHTXXKNC 696 E T ++ E+L GC HY R C+++ C+E + CRHCHN+A + H + R V ++C +C Q Q C C CMG Y+C CKL+DDD +K YH ++FHC C C + + N+H C+E + +CP+C EY+F +R+ VI L C H + C Sbjct: 129 EKTYYDKEQEIL-------GCSHYMRNCKVQCFDCHEWYTCRHCHNDACD---------HVLERPAVENMLCMICSKVQPAAQYCKYCKNCMGRYYCNKCKLWDDDPNKSSYHCDDCGICRIGRGLGDDYFHCKTCGLCLPISVFNTHRCIERSTDCNCPICGEYMFNSRERVIFLSCSHPLHQRC 298 The following BLAST results are available for this feature:
BLAST of CK933536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933536 ID=CK933536; Name=CK933536; organism=Citrus sinensis; type=EST; length=704bpback to top |