CK933879

Overview
NameCK933879
Unique NameCK933879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933879 vs. ExPASy Swiss-Prot
Match: AMPN_ECOLI (Aminopeptidase N OS=Escherichia coli (strain K12) GN=pepN PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 3.120e-62
Identity = 124/274 (45.26%), Postives = 170/274 (62.04%), Query Frame = 2
Query:    5 DQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGRAVTCEDFFAAMRDANDAEFANFLLWYSQARTPRLEVTSSYSAETHTYSLKFGQEVPSTPGQPVKEPMFIPVAIGLLDSSGKDMPLSSVYHNGRLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRXXXXXXXXXXXXXXANDSDEFNRWEAGQVLARKLMLSLVADFHKTN 826
            DQEFSSD+GSR V RI +V  +R  QF +DA PMAHP+RP   I+M+NFYT+TVYEKGAEV+RM  TLLG + F+KGM LYF+RHDG A TC+DF  AM DA++ + ++F  WYSQ+ TP + V   Y+ ET  Y+L   Q  P+TP Q  K+P+ IP AI L D+ GK +PL    H            PV  +VL VT+ E+ FVF ++  +P+P++L  +SAP++               +  ++F+RW+A Q        SL+A + K N
Sbjct:  327 DQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGH------------PV-NSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQ--------SLLATYIKLN 579          
BLAST of CK933879 vs. ExPASy Swiss-Prot
Match: AMPN_HAEIN (Aminopeptidase N OS=Haemophilus influenzae GN=pepN PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 9.394e-59
Identity = 123/268 (45.90%), Postives = 162/268 (60.45%), Query Frame = 2
Query:    5 DQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGRAVTCEDFFAAMRDANDAEFANFLLWYSQARTPRLEVTSSYSAETHTYSLKFGQEVPSTPGQPVKEPMFIPVAIGLLDSSGKDMPLSSVYHNGRLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRXXXXXXXXXXXXXXANDSDEFNRWEAGQVL-ARKLMLSLV 805
            DQEFSSD GSR V RI +V  LR  QF +DA PM+HP+RP   I+M+NFYTVTVYEKGAEV+RM  TLLG QGF+KGM LY   +DG+A TCEDF +AM  AN+ +   F  WYSQ+ TP L ++ +Y  +THTY L   Q  P T  Q  K  + IP+ + L D++G    L    HNG L S           VL VT+K++ F F  I  RPIP++L  +SAP++                  ++F RW+A Q+L A++L  ++V
Sbjct:  328 DQEFSSDTGSRAVNRINNVKFLRTVQFAEDASPMSHPIRPEKVIEMNNFYTVTVYEKGAEVIRMLHTLLGEQGFQKGMQLYIAENDGKAATCEDFVSAMERANNLDLNQFRRWYSQSGTPELLISDAYDEKTHTYRLTVSQSTPPTADQMEKVNLHIPLKVALYDANGTKQMLQ---HNGELLS----------DVLNVTEKDQVFEFHGIYGRPIPALLCDFSAPVKLDYDYKTEQLLGLLKFADNQFIRWDAAQMLFAQELRRNVV 582          
BLAST of CK933879 vs. ExPASy Swiss-Prot
Match: AMPN_CAUCR (Aminopeptidase N OS=Caulobacter crescentus GN=pepN PE=3 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.500e-56
Identity = 115/268 (42.91%), Postives = 155/268 (57.84%), Query Frame = 2
Query:    5 DQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGRAVTCEDFFAAMRDANDAEFANFLLWYSQARTPRLEVTSSYSAETHTYSLKFGQEVPSTPGQPVKEPMFIPVAIGLLDSSGKDMPLSSVYHNGRLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRXXXXXXXXXXXXXXANDSDEFNRWEAGQVLARKLMLSLVA 808
            DQ  S+DM    V+RI DV  LR  QF +DAGP+AHPVRP SY+K+DNFYT T+YEKGAE++RM K +LG+  FRKG DLYF+RHDG A T E F A   +A+  + + F  WY QA TP + + ++Y A     +L   Q    TPGQP K+P+ IP+AIGLL + G+ +                      T ++ + + +    +  I E P+ S LRG+SAP+                +D+D FNRWEAGQ LAR L+L+  A
Sbjct:  329 DQGLSADMRGAAVQRIKDVRALRARQFAEDAGPLAHPVRPSSYLKIDNFYTATIYEKGAEIIRMLKAILGAPAFRKGCDLYFQRHDGEATTVEAFIACFAEASGRDLSGFFGWYEQAGTPSVTIETAYDAAAGALTLTLTQSTSPTPGQPDKKPLPIPIAIGLLAADGRVLR--------------------DTEIVLLDQAQMTVRWDSIPEPPVLSALRGFSAPVNLSTDARPSDRYVLFGSDTDLFNRWEAGQTLARDLILTRAA 576          
BLAST of CK933879 vs. ExPASy Swiss-Prot
Match: AMP1_PLAFQ (M1 family aminopeptidase OS=Plasmodium falciparum (isolate FcB1 / Columbia) PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 8.813e-49
Identity = 102/280 (36.43%), Postives = 155/280 (55.36%), Query Frame = 2
Query:   14 FSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGRAVTCEDFFAAMRDA-------NDAEFANFLLWYSQARTPRLEVTSSYSAETHTYSLKFGQEVPSTPGQPVKEPMFIPVAIGLLD-SSGKDMPLSSVYHNGRLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRXXXXXXXXXXXXXXANDSDEFNRWEAGQVLARKLMLSLVADFHKTNH 829
            FS +M      R++ V  LR+ QF +D+ P++HP+RP SY+ M+NFYT TVY+KG+EV+RMY T+LG + ++KG D+Y K++DG   TCEDF  AM  A       N A    +LLW+SQ+ TP +    +Y AE   YS+   Q       Q  K+P+FIP+++GL++  +GK+M                    +  T L +TK+ + FVF++I+ +PIPS+ RG+SAP+                 DSD F R+ +   +  K +L    +F K  +
Sbjct:  529 FSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRPESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQYLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEM--------------------ISQTTLELTKESDTFVFNNIAVKPIPSLFRGFSAPVYIEDNLTDEERILLLKYDSDAFVRYNSCTNIYMKQILMNYNEFLKAKN 788          
The following BLAST results are available for this feature:
BLAST of CK933879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
AMPN_ECOLI3.120e-6245.26Aminopeptidase N OS=Escherichia coli (strain K12) ... [more]
AMPN_HAEIN9.394e-5945.90Aminopeptidase N OS=Haemophilus influenzae GN=pepN... [more]
AMPN_CAUCR1.500e-5642.91Aminopeptidase N OS=Caulobacter crescentus GN=pepN... [more]
AMP1_PLAFQ8.813e-4936.43M1 family aminopeptidase OS=Plasmodium falciparum ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004278_A05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933879 ID=CK933879; Name=CK933879; organism=Citrus sinensis; type=EST; length=886bp
GGGTGATCAGGAATTTTCATCTGACATGGGAAGTCGCACTGTAAAGCGGA
TTGCTGATGTTTCAAAGCTACGAAATTATCAATTTCCACAGGATGCTGGT
CCTATGGCTCATCCTGTTCGGCCACATTCTTACATCAAGATGGATAACTT
CTACACAGTGACGGTTTATGAAAAGGGAGCTGAAGTCGTTAGGATGTACA
AAACCCTACTTGGGAGTCAAGGGTTCCGAAAGGGCATGGATCTTTATTTT
AAGAGACATGACGGGCGAGCTGTAACCTGTGAAGATTTTTTTGCGGCCAT
GCGAGATGCAAATGATGCCGAATTTGCTAATTTCTTACTATGGTACTCCC
AAGCTCGAACGCCTCGCTTGGAAGTCACTTCGTCCTATAGTGCTGAAACT
CATACTTATTCTTTGAAATTCGGTCAAGAGGTACCATCAACCCCGGGGCA
GCCAGTGAAAGAACCCATGTTCATCCCTGTGGCAATAGGTCTGCTGGACT
CAAGTGGCAAGGACATGCCACTTTCTTCTGTGTATCATAATGGGAGATTG
CAATCTCTTGGAAGCAACAATCAGCCAGTCTACACAACAGTTCTTCGAGT
AACCAAGAAAGAGGAAGAATTTGTGTTCTCTGATATATCCGAGCGGCCAA
TTCCGTCTATCTTGCGGGGTTACAGCGCCCCTATTCGCCTTGAATCTGAT
CTCTCCAATAGTGATCTGTTTTTCCTCCTTGCTAATGATTCGGATGAGTT
CAACCGTTGGGAAGCTGGACAGGTGTTGGCAAGGAAACTGATGCTCAGCT
TGGTGGCTGATTTCCACAAAACAAACCACTGGTTCTGAATCCAAAGTTTG
TGCATGGCTTCAGAAGTATGCTTGGTGATTCAAGCT
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