CK934564

Overview
NameCK934564
Unique NameCK934564
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934564 vs. ExPASy Swiss-Prot
Match: YEY6_SCHPO (Putative methyltransferase C2C4.06c OS=Schizosaccharomyces pombe GN=SPAC2C4.06c PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 1.077e-18
Identity = 45/137 (32.85%), Postives = 75/137 (54.74%), Query Frame = 3
Query:  174 GSIKSLVYSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNSKWKRQEELVYILTYDILF---GQEISLVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELG 575
            GSIK L ++    + K TYALVC+TLK+  ++ +++  + +L      +E L  +L +D+L    G  IS  G  ++ ++ HK  +     +L V+  VKS E+L    + P V  PR++R+NT+K   D  +  LG
Sbjct:   19 GSIKQLAFNSKKHDPKRTYALVCETLKYKPVLDEIIARSELL-----LKENLARVLVHDLLMSKRGLSIS-NGPIKECILRHKTRLNAEFVKLKVKKGVKSHEEL--ALKNP-VSLPRWLRINTIKSTKDEVLQGLG 146          

HSP 2 Score: 46.2098 bits (108), Expect = 1.077e-18
Identity = 30/66 (45.45%), Postives = 37/66 (56.06%), Query Frame = 2
Query:  611 LIVNGCVFLQGKASSMVAAALAPKPGW--KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 802
            L   G V +Q KAS   AA LA   G    ++D C+APGNKT HLAA    K  I A E + +RV+
Sbjct:  184 LYKEGKVIIQDKASCFPAAVLAGLTGHVGDIIDGCAAPGNKTTHLAACFP-KSHIFAFERDAKRVQ 248          
BLAST of CK934564 vs. ExPASy Swiss-Prot
Match: NSUN5_HUMAN (Putative methyltransferase NSUN5 OS=Homo sapiens GN=NSUN5 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.100e-15
Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 3
Query:  141 VLRGDARRRAVGSIKSLVYSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNSKWKRQEELVYILTYDILFGQEISLVGDAEKFLM-LHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAV 563
            VL G   R+  GSIK LVYS + +N K  YALVC+T ++ +++  V+ SA +L ++ K +  L  +L Y++L G+     G   K L+  H+  ++  LA+L V   V   EDL+ +   P      PR+VRVNTLK   D  V
Sbjct:   10 VLAGVESRQ--GSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLLRAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVV 151          

HSP 2 Score: 73.559 bits (179), Expect = 1.490e-12
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  593 DLRVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERV 799
            DL  HPL   G + LQ +AS + A  L P PG  V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+
Sbjct:  196 DLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRL 264          
BLAST of CK934564 vs. ExPASy Swiss-Prot
Match: NSUN5_MOUSE (Putative methyltransferase NSUN5 OS=Mus musculus GN=Nsun5 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.524e-14
Identity = 52/144 (36.11%), Postives = 80/144 (55.56%), Query Frame = 3
Query:  141 VLRGDARRRAVGSIKSLVYSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNSKWKRQEELVYILTYDILFGQEISLVGDAEKFLM-LHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--VPKPRYVRVNTLKMDVDSAV 563
            VL G   R+  GS+K LVYS + +N K  YALVC+T ++ +++  V+ SA +L ++ K +  L  +L Y++L G+     G   K L+  H+  ++  LA+L V   V   EDL+     P      PR+VRVNTLK   + A+
Sbjct:   10 VLAGVESRQ--GSLKGLVYSSNFQNLKQLYALVCETQRYSAVLDAVIASAGLLRAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNEDLLQESSRPGQAYQVPRFVRVNTLKTRPEDAI 151          

HSP 2 Score: 70.4774 bits (171), Expect = 1.261e-11
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  593 DLRVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERV 799
            DL  HPL   G + LQ KAS + A  L+P PG  V+DAC+APGNKT ++AAL+K +GKI A + + +R+
Sbjct:  196 DLHEHPLYRAGHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRL 264          
BLAST of CK934564 vs. ExPASy Swiss-Prot
Match: YNC2_YEAST (Uncharacterized protein YNL022C OS=Saccharomyces cerevisiae GN=YNL022C PE=1 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 1.156e-12
Identity = 27/75 (36.00%), Postives = 39/75 (52.00%), Query Frame = 2
Query:  596 LRVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM------KGKGKIVACELNKERVR 802
            +  H L  +G + +Q +AS   A  L P P   V+D+CSAPGNKT H A+ +          +I A E + ER +
Sbjct:  213 ITAHELYKHGKIIIQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPERAK 287          

HSP 2 Score: 45.0542 bits (105), Expect = 1.156e-12
Identity = 39/180 (21.67%), Postives = 89/180 (49.44%), Query Frame = 3
Query:  114 REAAKVLRLVLRGDARRRAVGSIKSLVYSPSVK-----NKKATYALVCQTLKHLSIIKQVLDSASILNSKWKRQEELVY------ILTYDILFGQEISLV---GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQ-TPDVPKPRYVRVNTLKM----DVDSAVLELGKQFVVVI 596
            R+A  VL  + +  A+ R  GS+++LV     +     N K  YA++    K+   +++V+  A IL    K++ + ++      +L +D+L  ++  +       + +++  K  +   + +L ++ KV+ + +L+     + D+P  R++R+N LK     + +  + EL K+F + +
Sbjct:    5 RDATWVLEDIEKEAAKERISGSMQTLVLKSCKRYKLKSNPKHIYAVLDSCWKYKPYLEKVMKKAHILEDIPKKKGKPLFSRLTLLLLCHDLLLSKQKRIQMGKHPIKDYVLKFKSPLHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINPLKCHPNGETEPVLAELRKKFTLKV 184          
The following BLAST results are available for this feature:
BLAST of CK934564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YEY6_SCHPO1.077e-1832.85Putative methyltransferase C2C4.06c OS=Schizosacch... [more]
NSUN5_HUMAN7.100e-1537.50Putative methyltransferase NSUN5 OS=Homo sapiens G... [more]
NSUN5_MOUSE3.524e-1436.11Putative methyltransferase NSUN5 OS=Mus musculus G... [more]
YNC2_YEAST1.156e-1236.00Uncharacterized protein YNL022C OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004229_E06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934564 ID=CK934564; Name=CK934564; organism=Citrus sinensis; type=EST; length=805bp
GGGGAGCCATGGCGCGCACTAAGACAGCGGCAACTGCCCCATCGGGAGCA
TCAGCGAAGACATCTCGAAACGGCCGACTAAGCAACGCTGAGCGGTCGGC
TTACTTCGCGAGGAGAGAAGCGGCGAAGGTTTTGCGGTTGGTCCTCCGAG
GCGACGCACGTCGCCGAGCCGTCGGCTCCATCAAGTCGCTCGTCTATAGC
CCCTCTGTGAAGAACAAAAAAGCCACTTACGCTTTGGTTTGTCAAACTCT
CAAACATCTCTCTATTATTAAACAAGTGTTGGACTCTGCTAGCATACTCA
ATAGCAAATGGAAGAGGCAAGAAGAATTGGTCTACATACTAACTTACGAC
ATCCTCTTTGGCCAGGAAATATCATTAGTAGGTGATGCAGAGAAGTTTCT
GATGCTCCATAAAGGTGCTATACAATTGGCTCTAGCTCAACTTTTAGTGA
GGAATAAGGTCAAGAGCATTGAAGACTTAATGGCACTTTATCAAACTCCT
GATGTTCCAAAGCCTCGTTACGTTCGTGTCAATACTCTGAAAATGGATGT
TGATTCGGCGGTGCTTGAATTGGGGAAGCAGTTTGTGGTTGTGATTTGCG
CGTTCATCCTCTGATCGTCAATGGATGTGTATTCTTGCAAGGAAAAGCAA
GTTCTATGGTAGCAGCAGCCCTAGCACCCAAACCAGGATGGAAGGTTCTT
GATGCCTGTTCAGCTCCTGGAAACAAAACTGTGCACCTAGCTGCTCTTAT
GAAAGGAAAGGGAAAGATTGTAGCATGTGAGCTTAATAAGGAAAGGGTTA
GACGT
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