CK934694

Overview
NameCK934694
Unique NameCK934694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig728 contig Csv1_Contig728:14..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK934694 vs. ExPASy Swiss-Prot
Match: NOTUM_MOUSE (Protein notum homolog OS=Mus musculus GN=Notum PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20
Identity = 63/172 (36.63%), Postives = 91/172 (52.91%), Query Frame = 2 
Query:  224 CLDGTLPGYHIHRGSGSGANSWLIHLEGGGWCNTIRNCVYRKTTRRG--SAKFMEKQLPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSQNEGAQLY-FRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK----TTKVKCLSDAGMFLD 718
            C DG+  GY++    GS    WL+ LEGG +C    NC  R +T R   S+K        TGILS++ EENP ++N N V + YC    +SG S       Y F G  I    +++L+ KG+  A   LL+G SAGG   +L+ D   +L  +    + +V+ L+D+G FLD
Sbjct:  108 CNDGSPAGYYLKESKGS--RRWLLFLEGGWYCFNRENCDSRYSTMRRLMSSKDWPHTRTGTGILSSQPEENPHWWNANMVFIPYCSSDVWSGASPKSDKNEYAFMGSLIIQEVVRELLGKGLSGAKVLLLAGSSAGGTGVLLNVDRVAELLEELGYPSIQVRGLADSGWFLD 277
[Close]
BLAST of CK934694 vs. ExPASy Swiss-Prot
Match: NOTUM_HUMAN (Protein notum homolog OS=Homo sapiens GN=NOTUM PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19
Identity = 61/172 (35.47%), Postives = 92/172 (53.49%), Query Frame = 2 
Query:  224 CLDGTLPGYHIHRGSGSGANSWLIHLEGGGWCNTIRNCVYRKTTRRG--SAKFMEKQLPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSG-DSQNEGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK----TTKVKCLSDAGMFLD 718
            C DG+  GY++    GS    WL+ LEGG +C    NC  R  T R   S++   +    TGILS++ EENP ++N N V + YC    +SG  S++E  +  F G  I    +++L+ +G+  A   LL+G SAGG   +L+ D   +   K      +V+ L+D+G FLD
Sbjct:  101 CNDGSPAGYYLKESRGS--RRWLLFLEGGWYCFNRENCDSRYDTMRRLMSSRDWPRTRTGTGILSSQPEENPYWWNANMVFIPYCSSDVWSGASSKSEKNEYAFMGALIIQEVVRELLGRGLSGAKVLLLAGSSAGGTGVLLNVDRVAEQLEKLGYPAIQVRGLADSGWFLD 270
The following BLAST results are available for this feature:
BLAST of CK934694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NOTUM_MOUSE7.971e-2036.63Protein notum homolog OS=Mus musculus GN=Notum PE=... [more]
NOTUM_HUMAN8.813e-1935.47Protein notum homolog OS=Homo sapiens GN=NOTUM PE=... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004228_A10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934694 ID=CK934694; Name=CK934694; organism=Citrus sinensis; type=EST; length=848bp
GGGGGTCAAATTAGTCTCGCCTAAAGAAAGCTAAAAGAAAATGAAGCCGA
TGTTGTATTTCTGCTTCGTGATTGTTTTGATCCGCTCTGCGAGTGGCTTC
TTCGAGGATTTGGATGCTCGAGAGACTTCGCTTTCTTACTTAGAAAACGA
TGCTGCTGCTACGTCCGAGCCTCTCATGGTCCCTCTCACGCTTATTCAGG
GAGCTGATTCCAAAGGAGCTGTCTGTTTGGATGGCACGCTGCCTGGTTAT
CATATACACCGGGGTTCTGGATCGGGAGCAAACAGCTGGCTCATTCATTT
GGAAGGAGGTGGATGGTGTAATACCATTAGAAATTGTGTGTACCGCAAAA
CCACCCGCCGTGGATCAGCAAAATTTATGGAAAAGCAGCTACCATTTACC
GGCATATTGAGCAACAAAGCTGAAGAAAATCCAGATTTCTTCAACTGGAA
CAGAGTAAAGCTGCGTTACTGTGACGGGGCTTCGTTTAGTGGAGATAGTC
AAAATGAGGGAGCACAACTTTATTTTCGAGGACAACGTATTTGGTTAACT
GCTATGCAAGATTTAATGGCCAAGGGAATGCAGAATGCTGACCAGGCTCT
TCTTTCTGGATGCTCTGCGGGAGGGCTGGCATCCATTCTTCATTGTGATG
AGTTCCGCGATTTATTTCCTAAAACAACCAAAGTGAAATGTCTAAGTGAT
GCTGGAATGTTTCTAGATGCTGTTGATGTATCTGGTGGGCACACCTTAAG
GAATATGTTTGCAGGCGTAGTTAGCTTACAGGAAGTTCAAAAGAATCTGC
CAATTACTTGTACCAGCCAACTGGATCCAACATCGTGCTTCTTCCCTC
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