CK934705

Overview
NameCK934705
Unique NameCK934705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:447..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 1.585e-66
Identity = 126/167 (75.45%), Postives = 143/167 (85.63%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAG 502
            +IVPELGP+V FSYASHKAV EYKEAK LGV+TVPVL+GPVSYLLLSK AKGV K+F              EVI+ELKAAGA+WIQ DEP+LVMDL+  KLQAF+ AYAELESTLSGLNVLVETYFAD+PAEA++TLTSLKGVTA+GFDLVRGTKTL+L+K+GFP G
Sbjct:  119 YIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEG 285          
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 2.070e-66
Identity = 127/167 (76.05%), Postives = 142/167 (85.03%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAG 502
            FIVPELGP+V FSYASHKAV EYKEAK LGV+TVPVL+GPVSYLLLSK AKGV K+F              EV++ELK AGASWIQFDEPLLVMDL+SHKLQAFS AYA+LESTLSGLNV+VETYFADV AEA++TL SLKGVT YGFDLVRGTKTL+L+K+ FP+G
Sbjct:  119 FIVPELGPEVNFSYASHKAVLEYKEAKALGVDTVPVLVGPVSYLLLSKQAKGVDKSFDLLSLLPKILPIYKEVVAELKEAGASWIQFDEPLLVMDLESHKLQAFSAAYADLESTLSGLNVVVETYFADVTAEAYKTLISLKGVTGYGFDLVRGTKTLDLVKAEFPSG 285          
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 7.867e-66
Identity = 122/167 (73.05%), Postives = 142/167 (85.03%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAG 502
            FIVPELGPDVKFSYASHKAV EYKEAK LGV+TVPVL+GPVSYL+LSKPAKGV KTF              EVI+ELKAAGASWIQFDEP LV+DL+SH+L AF++AYAELES+LSGL+ L+ETYFADVPA A++TLTSL G++ +GFDLVRG +T+ELIK GFP+G
Sbjct:  118 FIVPELGPDVKFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLILSKPAKGVEKTFPLLSLLDKILPIYKEVIAELKAAGASWIQFDEPTLVLDLESHQLDAFTKAYAELESSLSGLSTLIETYFADVPAPAYKTLTSLSGISGFGFDLVRGAQTIELIKGGFPSG 284          
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.289e-65
Identity = 121/167 (72.46%), Postives = 142/167 (85.03%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAG 502
            +IVPELGP+V FSYASHKAV EYKEAK LGV+TVPVL+GPV++LLLSKPAKGV KTF              EVI ELKAAGASWIQFDEP LV+DL+SH+L+AF++AY+ELESTLSGLNV+VETYFAD+PAE ++ LT+LKGVT +GFDLVRG KTL+LIK GFP+G
Sbjct:  119 YIVPELGPEVNFSYASHKAVNEYKEAKELGVDTVPVLVGPVTFLLLSKPAKGVEKTFPLLSLLDKILPVYKEVIGELKAAGASWIQFDEPTLVLDLESHQLEAFTKAYSELESTLSGLNVIVETYFADIPAETYKILTALKGVTGFGFDLVRGAKTLDLIKGGFPSG 285          
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 9.729e-24
Identity = 68/166 (40.96%), Postives = 91/166 (54.82%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 499
            +IVP+   D +   A HK   E++EAK LG+ T PVL+GP ++L LS   +GV                  EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL++TYF DV  + +  L +L  V A GFD V G KTLEL+K GFPA
Sbjct:  122 YIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGV----KADDFVDSLVAAYQEVFAKLAELGATCIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGFDFVEGKKTLELVKGGFPA 281          
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.306e-23
Identity = 67/167 (40.12%), Postives = 92/167 (55.09%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGV-AKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 499
            +IVP+         A HK   EY+EAK LG++T PV++GP ++L LS    GV A+ F              +V ++L   GA+ IQ DEP LV DL + +   F   Y ++ +   GL VL++TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA
Sbjct:  122 YIVPKFEKTTAVKLAGHKIFDEYQEAKDLGLDTRPVVVGPFTFLQLSDFEDGVKAEDFVDSFIAAYQ-----DVFAKLAELGATRIQLDEPALVKDLTADEKALFLNLYNKILADKKGLEVLIQTYFGDV-RDVYNDLVNLP-VDAIGLDFVEGKKTLELVKGGFPA 281          
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_STRPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae GN=metE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.306e-23
Identity = 67/166 (40.36%), Postives = 90/166 (54.22%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 499
            +IVP+   D +   A HK   E++EAK LG+ T PVL+GP ++L LS   +GV                  EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL++TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA
Sbjct:  122 YIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGV----KADDFVDSLVAAYQEVFAKLAELGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPA 281          
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_STRP4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.306e-23
Identity = 67/166 (40.36%), Postives = 90/166 (54.22%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 499
            +IVP+   D +   A HK   E++EAK LG+ T PVL+GP ++L LS   +GV                  EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL++TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA
Sbjct:  122 YIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGV----KADDFVDSLVAAYQEVFAKLAELGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPA 281          
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.076e-22
Identity = 56/126 (44.44%), Postives = 75/126 (59.52%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYF 379
            ++VPELGPD  FS  S K V E++EA  LG    PVL+GP++YLLL+K A GVA  F              E++++L+AAGA+W+Q DEP LV D    +L A + AY EL        +LV +YF
Sbjct:  128 YLVPELGPDTVFSADSAKQVAEFREALALGWTPRPVLVGPLTYLLLAKAAPGVAADFEPLTLLDRLLPVYAEILADLRAAGATWVQLDEPALVQDRTPAELNAAARAYRELGGRADRPQLLVASYF 253          
BLAST of CK934705 vs. ExPASy Swiss-Prot
Match: METE_STRCO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces coelicolor GN=metE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.076e-22
Identity = 56/126 (44.44%), Postives = 72/126 (57.14%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLQAFSEAYAELESTLSGLNVLVETYF 379
            ++VPELGPD  F+  S K VTE  EA  LG+   PVL+GPV+YLLL+KPA G    F              EV+++L+AAGA W+Q DEP  V D    +L A   AY EL +      +LV +YF
Sbjct:  128 YLVPELGPDTVFTADSTKQVTELAEAVALGLTARPVLVGPVTYLLLAKPAPGAPADFEPLTLLDRLLPVYAEVLTDLRAAGAEWVQLDEPAFVQDRTPAELNALERAYRELGALTDRPKLLVASYF 253          
The following BLAST results are available for this feature:
BLAST of CK934705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
METE_ARATH1.585e-6675.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR2.070e-6676.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC7.867e-6673.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO2.289e-6572.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI9.729e-2440.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRTD6.306e-2340.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPN6.306e-2340.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP46.306e-2340.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG1.076e-2244.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRCO1.076e-2244.445-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_G05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934705 ID=CK934705; Name=CK934705; organism=Citrus sinensis; type=EST; length=502bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCCGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCCAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCAAGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACCAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GC
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