CK934779

Overview
NameCK934779
Unique NameCK934779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.341e-56
Identity = 94/150 (62.67%), Postives = 120/150 (80.00%), Query Frame = 1
Query:  217 RLTEERKAWRKNHPHGFVAKPETK-DGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            RL+EERK WR++HP+GF A+P T  DGS+NL +W C IPGKT T+WEGG +PL + F+EDYPSKPPKC+FP+ FFHPNVYPSGTVCLSILNE+  W+P++T+K +L+GIQDLLD PNP  PAQ     LF+ +  EY ++V+ Q+K YPP
Sbjct:    8 RLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVYPP 157          
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.081e-55
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1
Query:  208 ARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            A  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++RVR QAK++ P
Sbjct:    5 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.081e-55
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1
Query:  208 ARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            A  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++RVR QAK++ P
Sbjct:    5 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.081e-55
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1
Query:  208 ARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            A  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++RVR QAK++ P
Sbjct:    5 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.081e-55
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1
Query:  208 ARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            A  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++RVR QAK++ P
Sbjct:    5 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.081e-55
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1
Query:  208 ARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            A  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++RVR QAK++ P
Sbjct:    5 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.081e-55
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1
Query:  208 ARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            A  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++RVR QAK++ P
Sbjct:    5 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.081e-55
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1
Query:  208 ARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            A  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++RVR QAK++ P
Sbjct:    5 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.081e-55
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1
Query:  208 ARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            A  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++RVR QAK++ P
Sbjct:    5 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFSP 157          
BLAST of CK934779 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.081e-55
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1
Query:  208 ARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 663
            A  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++RVR QAK++ P
Sbjct:    5 ALSRLAQERKAWRKDHPFGFVAVPMKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFSP 157          
The following BLAST results are available for this feature:
BLAST of CK934779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
UBC9_DICDI9.341e-5662.67Sumo-conjugating enzyme ubc9 OS=Dictyostelium disc... [more]
UBC9_XENTR2.081e-5564.05SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis... [more]
UBC9_XENLA2.081e-5564.05SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=... [more]
UBC9_SPETR2.081e-5564.05SUMO-conjugating enzyme UBC9 OS=Spermophilus tride... [more]
UBC9_RAT2.081e-5564.05SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus ... [more]
UBC9_MOUSE2.081e-5564.05SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ub... [more]
UBC9_HUMAN2.081e-5564.05SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UB... [more]
UBC9_CHICK2.081e-5564.05SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=U... [more]
UBC9B_DANRE2.081e-5564.05SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=u... [more]
UBC9A_DANRE2.081e-5564.05SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=u... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_H06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934779 ID=CK934779; Name=CK934779; organism=Citrus sinensis; type=EST; length=866bp
GGGGATAGAAGCATGGAAGTTGCGTAAGCTTCAATCTTCCGTTTAAGAAT
ATCAGAAGTCAACATCCCGGGCAGCAAGCACGTACACGGTACTCGGTACT
CGGTACTCATAAGCTTGTTTCTTCTGCAAACAAACATTGATTAATACAGT
TAGTTATACAAGCGATCATAATTCAAACGTAAGAGTCATCATGTCGGGTG
GTGGTATGCTCGCGGCCGTCTTACAGAGGAGCGAAAAGCCTGGCGCAAGA
ATCATCCCCACGGTTTTGTGGCCAAGCCTGAAACCAAAGATGGTTCCGTG
AATTTGATGATCTGGGAGTGTATCATTCCTGGCAAGACTGGGACTGATTG
GGAAGGTGGCTACTTTCCTCTTACTCTCTACTTCAGCGAAGACTATCCCA
GCAAACCCCCAAAGTGTAAGTTTCCTCAAGGTTTCTTTCATCCTAATGTC
TACCCTTCTGGAACAGTATGCCTGTCAATCCTCAATGAGGACAATGGGTG
GAGACCTGCCATTACTGTGAAGCAAATTTTAGTGGGCATTCAGGATTTGC
TGGATCAACCCAATCCTGCTGATCCTGCACAAACTGATGGATACCAGCTT
TTCATCCAGGATCCTGCCGAGTACAAGAGAAGGGTGCGACAGCAGGCCAA
GCAATATCCACCTGTTCTATAATGCAAGCTTGCTTAAATGGATATGAGTA
ACTCATTTGTTACCTCACATGGTTTATGTCTATCATTATTTACTACAGTA
AACTCAGTTACAAGTGCACCAACTTTGGTGTTGAACATGGTTATAATATG
CTACCTGTATCATTTGTGAAGGGTGCTTTTATTGGCTGTCTTGTTTTCTT
CTTGTTCTGTTGACCG
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