CK934785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 500.36 bits (1287), Expect = 5.878e-141 Identity = 241/276 (87.32%), Postives = 257/276 (93.12%), Query Frame = 2 Query: 71 NHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 NH+SG P G +DAL RELWHACAGPL TLP EG+RVYYFP+GHMEQLEASMHQ LEQQMPSFNLPSKILCKV+N+QRRAEPETDEVYAQITLLPE DQSE TSPD P+ EPEKCTVHSFCKTLTASDTSTHGGFSVL RHADDCLPPLDMS+QPPWQELVATDLH +EW+FRHIFR QPRRHLLT GWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTN+PSSVISSHSMH+GVLA A+HAI TGT+FS+FYKPRTSRSEFIVSVN+ Sbjct: 5 NHSSG-KPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNR 279
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 455.292 bits (1170), Expect = 2.168e-127 Identity = 221/282 (78.37%), Postives = 244/282 (86.52%), Query Frame = 2 Query: 53 AAAVPLNHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 A +V A+ G TG S DALYRELWHACAGPL T+P +G+ VYYFPQGHMEQLEAS Q+L+Q +P FNLPSKILCKVVNV+ RAE ++DEVYAQI L PE DQ+E+TSP P EPEKC VHSFCKTLTASDTSTHGGFSVL RHA++CLPPLDM++ PPWQELVA DLHGNEW+FRHIFR QPRRHLLT GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MRQ NMPSSVISSHSMHLGVLA ASHAI+TGTLFS+FYKPRTS+SEF+VS NK Sbjct: 2 AGSVVAAAAAAGGGTGSSCDALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSQSEFVVSANK 283
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 440.269 bits (1131), Expect = 7.218e-123 Identity = 217/282 (76.95%), Postives = 243/282 (86.17%), Query Frame = 2 Query: 53 AAAVPLNHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 AAA+ + GG +G +DAL+RELWHACAGPL T+P G+RVYYFPQGHMEQLEAS +Q+L+Q +P FNLPSKILC VVNV+ RAE ++DEVYAQI L PE DQSE+TS DP + + EKCT HSFCKTLTASDTSTHGGFSVL RHA++CLP LDMS+ PP QELVA DLHG EW+FRHIFR QPRRHLLT GWSVFVSSK+LVAGDAFIFLRGE+ ELRVGVRR MRQ NMPSSVISSHSMHLGVLA ASHAI+TGTLFS+FYKPRTSRSEF+VSVNK Sbjct: 2 AAAMEMAANPGG--SGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNK 281
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2) HSP 1 Score: 406.757 bits (1044), Expect = 8.844e-113 Identity = 197/259 (76.06%), Postives = 222/259 (85.71%), Query Frame = 2 Query: 113 ALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSE-VTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIV 886 ALYRELWHACAGPL T+P + RV+YFPQGH+EQ+EAS +Q EQQMP ++LPSK+LC+V+NV +AE +TDEVYAQITLLPE +Q E + P+P P + VHSFCKTLTASDTSTHGGFSVL RHAD+CLPPLDMSRQPP QELVA DLH NEW FRHIFR QPRRHLL GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMHLGVLA A HAI+TGT+F+++YKPRTS SEFIV Sbjct: 57 ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIV 315
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2) HSP 1 Score: 397.897 bits (1021), Expect = 4.108e-110 Identity = 199/289 (68.86%), Postives = 229/289 (79.24%), Query Frame = 2 Query: 50 AAAAVPLNHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTS------PDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 AAAAV GG GG DAL+ ELW ACAGPL T+P G++V+YFPQGH+EQ+EAS +Q EQ+M +NLP KILC+V+NV+ +AEP+TDEVYAQ+TLLPE Q E P P + VHSFCKTLTASDTSTHGGFSVL RHAD+CLPPLDMSRQPP QELVA DLHG EW FRHIFR QPRRHLL GWSVFVS+K+LVAGDAFIFLRGEN ELRVGVRR MRQQTN+PSSVISSHSMHLGVLA A HA+ TGT+F+++YKPRTS +EF+V ++ Sbjct: 16 AAAAVARAGGGGGGGGGGGEDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDR 304
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSI (Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23 PE=2 SV=1) HSP 1 Score: 397.127 bits (1019), Expect = 7.008e-110 Identity = 199/289 (68.86%), Postives = 229/289 (79.24%), Query Frame = 2 Query: 50 AAAAVPLNHASGGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTS------PDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 AAAAV GG GG DAL+ ELW ACAGPL T+P G++V+YFPQGH+EQ+EAS +Q EQ+M +NLP KILC+V+NV+ +AEP+TDEVYAQ+TLLPE Q E P P + VHSFCKTLTASDTSTHGGFSVL RHAD+CLPPLDMSRQPP QELVA DLHG EW FRHIFR QPRRHLL GWSVFVS+K+LVAGDAFIFLRGEN ELRVGVRR MRQQTN+PSSVISSHSMHLGVLA A HA+ TGT+F+++YKPRTS +EF+V ++ Sbjct: 16 AAAAVARAGGGGGGGGGGGEDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDR 304
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFX_ORYSJ (Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24 PE=2 SV=1) HSP 1 Score: 380.563 bits (976), Expect = 6.788e-105 Identity = 196/293 (66.89%), Postives = 224/293 (76.45%), Query Frame = 2 Query: 53 AAAVPLNHASGGPPTGGSN-DALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQ-MPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDP-------------PIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIV 886 AAA P+ +GG GG D L+ ELW ACAGPL T+P G+RV+Y PQGH+EQ+EAS +Q EQQ P +NLP KI CKV+NV+ +AEP+TDEVYAQ+TLLPE Q S + P E+ VHSFCKTLTASDTSTHGGFSVL RHAD+CLPPLDMS+ PP QELVA DLHG EW FRHIFR QPRRHLL GWSVFVS+K+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMHLGVLA A HA+ TGT+F+++YKPRTS SEF+V Sbjct: 7 AAASPVEGLTGGGGGGGGGVDGLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVV 299
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 3.153e-102 Identity = 187/279 (67.03%), Postives = 221/279 (79.21%), Query Frame = 2 Query: 65 PLNHASGGPPTGGSN-DALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEV----TSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIV 886 P A PP G S D LY ELWHACAGPL T+P G V+YFPQGH+EQ+EASM+Q + QM ++LPSK+LC+V+NV+ +AE +TDEVYAQ+ L+PEP+Q+E+ T+P P + V SFCKTLTASDTSTHGGFSVL RHAD+CLPPLDM++ PP QELVA DLH +W FRHIFR QPRRHLL GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MRQ +N+PSSVISS SMHLGVLA A HAI T ++F+++YKPRTS SEFI+ Sbjct: 3 PAAMAPPPPPQGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSG-PVQARPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFII 280
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 365.54 bits (937), Expect = 2.260e-100 Identity = 183/268 (68.28%), Postives = 215/268 (80.22%), Query Frame = 2 Query: 98 GGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQEL-EQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 G ++D LY ELW ACAGPL +P G+RV+YFPQGHMEQL AS +Q + +Q++P FNLP KILC+V++V +AE ETDEVYAQITL PE DQSE TS DPP+ EP K TV SF K LTASDTSTHGGFSVL +HA +CLP LDM++ P QELVA DLHG EW F+HIFR QPRRHLLT GWS FV+SK+LVAGDAF+FLRGE +LRVGVRR +QQ+ MP+SVISS SM LGVLA ASHA+ T T+F +FYKPR S+FI+SVNK Sbjct: 33 GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNK 298
BLAST of CK934785 vs. ExPASy Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 3.989e-97 Identity = 180/273 (65.93%), Postives = 208/273 (76.19%), Query Frame = 2 Query: 83 GGPPTGGSNDALYRELWHACAGPLATLPCEGQRVYYFPQGHMEQLEASMHQELE-QQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPIPEPEKCTVHSFCKTLTASDTSTHGGFSVLHRHADDCLPPLDMSRQPPWQELVATDLHGNEWNFRHIFRDQPRRHLLTIGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNMPSSVISSHSMHLGVLAIASHAIATGTLFSIFYKPRTSRSEFIVSVNK 898 G + D LY ELW CAGPL +P +RV+YFPQGHMEQL AS +Q + +++P F+LP KILC+V++V +AE ETDEVYAQITL PE DQSE TS DPPI P K HSF K LTASDTSTHGGFSVL +HA +CLP LDM++ P QELV DLHG EW F+HIFR QPRRHLLT GWS FVSSK+LVAGDAF+FLRGEN +LRVGVRR R Q+ MP+SVISS SMHLGVLA ASHA+ T T+F +FYKPR S+FIV VNK Sbjct: 11 GSSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRI--SQFIVGVNK 281 The following BLAST results are available for this feature:
BLAST of CK934785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934785 ID=CK934785; Name=CK934785; organism=Citrus sinensis; type=EST; length=900bpback to top |