CK934787

Overview
NameCK934787
Unique NameCK934787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig263 contig Csv1_Contig263:1..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 108/255 (42.35%), Postives = 139/255 (54.51%), Query Frame = 1
Query:  145 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELK-------RSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK----------------SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE---TPAAAPKSSVKANS-QKSV--PKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEK 822
            MCGGAIIS +IPP    R  ++T E++WP+LK       + SNK+     +DDDFEADFQGFK                       KPF F+A  K                ++    V+  EQA+KS++RKRKNQYRGIRQRPWGKWAAEIRDP KG R WLGTF+T              IRG KAKVNFP+E   +  +  + S K N+ QKSV  P   ++ VQ   + +  Y NNS  + + ++S +EEK
Sbjct:    1 MCGGAIISDFIPPP---RSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNV------KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEEK 246          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.138e-39
Identity = 108/244 (44.26%), Postives = 134/244 (54.92%), Query Frame = 1
Query:  145 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRS--SNKKYSKPI-----VDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK------SHGSTAVKHVE----QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDET-PAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEK 822
            MCGGAIIS +IPP    R +++T+E++WP+LK++   +KK SK        D +FEADFQGFK                       KPF F++  K      + GS   K V      A+KS  RKRKNQYRGIRQRPWGKWAAEIRDP +G R+WLGTF T              IRG KAKVNFP+E   A + K SVKAN QK V K   +P  P+L QN +         + N+  +EEK
Sbjct:    1 MCGGAIISDFIPPP---RSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADV---KPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPNP-SPALVQNSNI-------SFENMCFMEEK 230          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.821e-29
Identity = 88/237 (37.13%), Postives = 118/237 (49.79%), Query Frame = 1
Query:  145 MCGGAIISGYIPPTVPGRP---KKLTAEYLWPELKR----SSNKKYSKPIV---DDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVE-QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEK 822
            MCGGAII       + G P   ++ T   LWPE K+       +++    V   D+DFEADF+ F+                         F  +  R +  +      +  A KS +RKRKNQ+RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+              IRGKKAKVNFP E P  A K    + + K+ PK+ +   +P++   F+ L N++   Y + +    K
Sbjct:    1 MCGGAIIHH-----LKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP-EAPTTAQKRRAGSTTAKA-PKSSVEQ-KPTVKPAFNNLANANAFVYPSANFTSNK 229          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.991e-28
Identity = 89/247 (36.03%), Postives = 104/247 (42.11%), Query Frame = 1
Query:  145 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD---------ETPAAAPKS--------------SVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILE 816
            MCGGAIIS Y P     + +KLTAE LW EL  S+          DDF   +   K                               + +    AVK  +  +    RKRKN YRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT              IRG KAK+NFPD           P ++P+S              S    SQ S P  C+        QN  Y    D D    +S LE
Sbjct:    1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAA---------DDFWGFYSTSKLHP--------------------------TNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLE 212          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.970e-19
Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 1
Query:  451 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYL 771
            ++  +R+RKN YRGIRQRPWGKWAAEIRDP+KGVRVWLGTF T              IRG+KAK+NFP+        +    N  + + +  +  +   L    DY+
Sbjct:   39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKPGGNQNELISENQVESLSEDLMALEDYM 145          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.373e-18
Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 1
Query:  463 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPA-----AAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEE 819
            ++K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT              IRG KAK+NFP+E+       A     V+ N +  +  A +S    S   +F +  N+      +   LE+
Sbjct:   18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPSSSCLDFLWEENNPDTLLIDTQWLED 141          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17
Identity = 50/116 (43.10%), Postives = 62/116 (53.45%), Query Frame = 1
Query:  391 TFSAGRKSHGSTAVKHVEQAKKSTERK-RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-------DETPAAAPKSSVKANSQKSV 714
            T S+ R+   S   K  E   K  +RK +KN YRG+RQRPWGK+AAEIRDP +  RVWLGTF T               RG +AK+NFP         +P AA     KA++  SV
Sbjct:  104 TSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAADDIGAKASASASV 219          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.353e-16
Identity = 48/124 (38.71%), Postives = 64/124 (51.61%), Query Frame = 1
Query:  421 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSV-----------KANSQKSVPKACLSPVQPSLNQN 759
            +TA    E +  S ++ R+ +YRG+RQRPWGKWAAEIRDP K  RVWLGTF+                RG KAK+NFP+      P S+               S+ S     L P++P+ NQ+
Sbjct:  165 TTATASSETSSFSGDQPRR-RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVKLVRPASTEAQPVHQTAAQRPTQSRNSGSTTTLLPIRPASNQS 287          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.768e-16
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 1
Query:  385 PFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 678
            P +F+    SH     + + +A     R++K +YRG+RQRPWGKWAAEIRDP +  RVWLGTF+T               RG KAK+NFP++     P
Sbjct:   45 PSSFARVDSSHNPIE-ESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPP 141          
BLAST of CK934787 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.938e-16
Identity = 47/110 (42.73%), Postives = 54/110 (49.09%), Query Frame = 1
Query:  472 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLN-QNFDYLNNSDQDYYN 798
            RK  YRG+RQRPWGKWAAEIRDP K  RVWLGTF T               +G KAK+NFP+    A+  S+             +    P  N Q   Y N   Q YYN
Sbjct:   88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPPNYYSSNNQIYYSNPQTNPQTIPYFN---QYYYN 194          
The following BLAST results are available for this feature:
BLAST of CK934787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
RAP22_ARATH5.457e-4242.35Ethylene-responsive transcription factor RAP2-2 OS... [more]
RA212_ARATH1.138e-3944.26Ethylene-responsive transcription factor RAP2-12 O... [more]
ERF1_ORYSJ1.821e-2937.13Ethylene-responsive transcription factor 1 OS=Oryz... [more]
RAP23_ARATH9.991e-2836.03Ethylene-responsive transcription factor RAP2-3 OS... [more]
ERF71_ARATH4.970e-1943.93Ethylene-responsive transcription factor ERF071 OS... [more]
ERF73_ARATH9.373e-1839.52Ethylene-responsive transcription factor ERF073 OS... [more]
EF109_ARATH4.652e-1743.10Ethylene-responsive transcription factor ERF109 OS... [more]
ABR1_ARATH1.353e-1638.71Ethylene-responsive transcription factor ABR1 OS=A... [more]
EF110_ARATH1.768e-1642.86Ethylene-responsive transcription factor ERF110 OS... [more]
EF115_ARATH3.938e-1642.73Ethylene-responsive transcription factor ERF115 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934787 ID=CK934787; Name=CK934787; organism=Citrus sinensis; type=EST; length=822bp
NCGGCCGGGGATTCACTAGACACTGANNNATCCAAAACTCTCTCAAGCCA
ACAAAAGCAAATTTTTACATTTAACCCATTCTCTTCTAAAAATCTTTTCT
CTTTAGTCCCTGAACAAACCAGAAGAAACGATAAACCCTTAACCATGTGT
GGAGGTGCTATCATTTCGGGCTACATCCCGCCCACCGTGCCGGGCCGTCC
AAAGAAGCTGACGGCGGAGTATCTCTGGCCGGAGCTGAAGAGGTCATCCA
ACAAGAAGTACTCAAAGCCGATCGTCGACGATGATTTCGAGGCTGATTTC
CAAGGATTCAAGGACGATGAAGAAGAGTCTGACATTGATGGTGACGTGGA
CGTTGATGCCGACTTGATGATGGCTGATATTAAGCCTTTTACTTTCTCAG
CTGGTCGCAAGTCTCATGGATCTACAGCCGTGAAGCACGTTGAACAAGCT
AAAAAATCCACAGAAAGAAAGAGGAAGAATCAATATAGGGGAATTAGGCA
GCGTCCATGGGGAAAATGGGCTGCTGAGATCCGTGACCCCACAAAAGGGG
TTCGTGTCTGGCTAGGAACTTTCAATACCGCTGAAGAAGCCGCTAGGGCT
TATGATGCCGAGGCACGGAGGATCCGTGGGAAGAAAGCTAAGGTTAACTT
TCCAGATGAAACTCCTGCTGCTGCTCCAAAGAGCTCAGTGAAGGCAAACT
CTCAGAAATCAGTTCCCAAAGCTTGCCTAAGCCCCGTGCAGCCAAGTTTG
AACCAGAACTTCGATTACTTGAACAACTCCGATCAGGATTACTACAACAA
TGTGAGTATTCTGGAGGAGAAA
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