CK934797

Overview
NameCK934797
Unique NameCK934797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934797 vs. ExPASy Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.599e-37
Identity = 76/143 (53.15%), Postives = 98/143 (68.53%), Query Frame = 3
Query:  177 DCSTLVLNMADCLSFVQAGSTVTKPQGSCCSGLKTVLKADAECLCEAFRSSASLGVTLNVTKAQTLPSLCKVSAPSATNCALSLSPAGAPTIGSGLXXXXXXXXXXXXXXNEQAPAPAPGISGSSMTFNSLGSLFIGLVLAIF 605
            DCSTL+LNMADCLSFV +G TV KP+G+CCSGLKTVLKAD++CLCEAF+SSASLGVTLN+TKA TLP+ CK+ APS   C LS++P+ AP +  G+                 AP P+ G  GSS+   S  ++   ++  +F
Sbjct:   42 DCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPETAGFL------APNPSSGNDGSSLIPTSFTTVLSAVLFVLF 178          
BLAST of CK934797 vs. ExPASy Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.507e-30
Identity = 71/153 (46.41%), Postives = 99/153 (64.71%), Query Frame = 3
Query:  177 DCSTLVLNMADCLSFVQAGSTVTKPQGSCCSGLKTVLKADAECLCEAFRSSASLGVTLNVTKAQTLPSLCKVSAPSATNCALSLS-------PAGAPTIGSGLXXXXXXXXXXXXXXNEQAPAPAPGISGSSMTFNSLGSLFIGLVLAIFSGF 614
            DCS+L+LNMADCLSFV +GSTV KP+G+CCSGLKTV++   ECLCEAF++S SLG+TL+++KA +LPS+CKV+AP +  C LS+S       P  +PT G+G               N   P  +P  S +S+   S+   F+ + +A+ S F
Sbjct:   26 DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTAGAG-------APALSSGANAATPVSSPRSSDASLL--SVSFAFV-IFMALISSF 168          
BLAST of CK934797 vs. ExPASy Swiss-Prot
Match: XYP11_ARATH (Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.896e-13
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 3
Query:  177 DCSTLVLNMADCLSFVQAGSTVTKPQGSCCSGLKTVLKADAECLCEAFRSSAS--LGVTLNVTKAQTLPSLCKVSAPSATNCAL----SLSPAGAPTIGSG 461
            +C   +LN++DC S+VQ GS   KP+ +CC  L  ++++  EC+C  +   AS   GV L+  +A+ L ++C V APS + C++    ++SPAG+    SG
Sbjct:   39 NCLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFPTISPAGSEDSSSG 139          
The following BLAST results are available for this feature:
BLAST of CK934797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
NLTL5_ARATH6.599e-3753.15Non-specific lipid-transfer protein-like protein A... [more]
NLTL2_ARATH3.507e-3046.41Non-specific lipid-transfer protein-like protein A... [more]
XYP11_ARATH3.896e-1336.63Xylogen-like protein 11 OS=Arabidopsis thaliana GN... [more]
back to top
Properties
Property NameValue
Genbank descriptionCGF1004226_G04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934797 ID=CK934797; Name=CK934797; organism=Citrus sinensis; type=EST; length=803bp
NCGGCCGGGGATNNNTTCAAACAGCAAGNNNAACTTTCCTCATCTCAATC
CTTGCTTCAAATCAAATGGCATCAAAAGCAAACCTTGTTTTTCTGTTGGT
TCTCTCAATCTACGCCACCAATCATGGCGACTGTGCTCACCACCACGCGG
CTGTCCCATCACCGGCGGCGTCCGTTGACTGTTCGACTTTGGTGTTGAAC
ATGGCTGACTGTCTCTCGTTTGTGCAAGCCGGAAGCACAGTGACAAAGCC
ACAAGGATCTTGCTGTTCCGGACTCAAGACAGTGTTGAAGGCTGACGCTG
AGTGTCTATGCGAGGCTTTTAGGAGCAGTGCTTCTCTTGGTGTCACTTTG
AATGTCACAAAAGCCCAAACACTCCCTTCGCTTTGCAAAGTCTCTGCGCC
TTCTGCTACCAACTGTGCTTTGTCTCTTTCTCCTGCTGGTGCCCCAACTA
TTGGTAGTGGCTTGTCTCCGACTGCTGCCGCTGCACCGACTGATAGTGTT
GCAGCAAATGAGCAGGCTCCGGCACCGGCTCCAGGGATATCGGGTTCTTC
AATGACCTTCAATTCACTTGGATCTTTGTTTATTGGCCTCGTCCTTGCTA
TCTTCTCTGGTTTTTAATGCGAGTCTAATTCAGTTTCTACTGTTTTATTT
TGGTTTCTTAATAGTAGATCAAGTTTCTTTTGTTAGTCACTTGTTTTGAT
TTCGTATTGTTTTTAATGACTGTTGGATACTTGGATTATTTCAATTTTTA
GTTTAGATGGATTCTCGCTGTGACAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
back to top