CK934825 | Citrus Genome Database

Overview


Name	CK934825
Unique Name	CK934825
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	870

Libraries


Library Name	Type
Developing fruit peel at 38 DAFB	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig557	contig	Csv1_Contig557:1..852.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 5.060e-73
Identity = 90/149 (60.40%), Postives = 103/149 (69.13%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  F AQT HETTGG  W  AP G Y WGYC+NRE+  A  DYC  DPNYPC  GK Y+GRGP+QL+WNYNY +C           NNPDLLATDP +SFKSA WFWMT Q  KPSCH+VII  W PS +D  AGR+PG+GL  NI
Sbjct:  124 KREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLL--NNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNI 267

HSP 2 Score: 105.916 bits (263), Expect = 5.060e-73
Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 2

Query:  170 GWCGLTTDYCCE--GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 460
            GWCG T DYC +  GCQS C+           G+ GD G L  +I+R+ F+ +L +RND  CPAR FYTYDAFI AAK+FPAF  +G++  RKRE+AAF
Sbjct:   43 GWCGNTDDYCKKENGCQSQCS-----------GSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAF 130

HSP 3 Score: 30.8018 bits (68), Expect = 5.060e-73
Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  108 GSAGNCG---SGVVCPGGECCSR 167
            GSA  CG    G +CPGG CCS+
Sbjct:   19 GSAEQCGRQAGGALCPGGLCCSQ 41

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.455e-72
Identity = 87/147 (59.18%), Postives = 102/147 (69.39%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  FFAQT HETTGGW  AP G YAWGYC+ RE G+   DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSA+WFWMT Q  KPSCH+VII  W+PSA D  A RLPG+G+  NI
Sbjct:  132 KREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPG-DYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNI 275

HSP 2 Score: 108.612 bits (270), Expect = 1.455e-72
Identity = 54/99 (54.55%), Postives = 65/99 (65.66%), Query Frame = 2

Query:  170 GWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            GWCG T DYC  G CQS C     G   P   T   GG+LG IIS  MF+ +L++RND  C  + FY+Y+AFI AA++FP FG SG+ T RKREIAAFF
Sbjct:   45 GWCGNTNDYCGPGNCQSQCP----GGPTPTPPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFF 139

HSP 3 Score: 26.5646 bits (57), Expect = 1.455e-72
Identity = 12/22 (54.55%), Postives = 13/22 (59.09%), Query Frame = 3

Query:  111 SAGNCGS---GVVCPGGECCSR 167
            SA  CGS   G  CP G CCS+
Sbjct:   22 SAEQCGSQAGGARCPSGLCCSK 43

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.357e-72
Identity = 84/147 (57.14%), Postives = 96/147 (65.31%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC-RGKYY-GRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  F  QT HETTGGWPDAP G YAWGYC+ +E+      YCDP  NY C  GK Y GRGPIQLSWNYNY  C             P+L+ TDPV+SFK+AIWFWM  Q  KPSCH VI   W PSA D+ AGR+PGYG+  NI
Sbjct:  141 KREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLL--QEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNI 283

HSP 2 Score: 119.783 bits (299), Expect = 2.357e-72
Identity = 70/144 (48.61%), Postives = 83/144 (57.64%), Query Frame = 2

Query:   62 WVLTNFLSGFIFCTRRLSRELWKRRC----VPRRGVL*SIGWCGLTTDYCCEGCQSNCNQVVCGE-----CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 460
            W L  F S F+  + R S E   R+      P      S GWCG T DYC  GCQS C+    G+     CD  D   GDG  G L  II +  F+ LL++RND RCPA  FYTY+AFI AAK FP FGN+G++ MRKREIAAF
Sbjct:    4 WALFAFFSLFLSLSVRGSAEQCGRQAGDALCPGGLCCSSYGWCGTTVDYCGIGCQSQCDGGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAF 147

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 182.185 bits (461), Expect = 5.453e-72
Identity = 86/147 (58.50%), Postives = 103/147 (70.07%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K+++  FF QT HETTGGW  AP G Y+WGYCF +E   AS DYC+P+  +PC    +YYGRGP+QLSWNYNY  C           NNPDL+A D V++FK+AIWFWMTAQP KPSCH VI  +W+PS  D  AGRLPGYG+  NI
Sbjct:  138 KKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPAS-DYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLL--NNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNI 281

HSP 2 Score: 104.375 bits (259), Expect = 5.453e-72
Identity = 51/99 (51.52%), Postives = 64/99 (64.65%), Query Frame = 2

Query:  170 GWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            GWCG T  YC + GCQS        +C P     G  G+L  IIS   F+D+L++RND  CPAR FYTY+AFI AAK+FP FG +G+   RK+E+AAFF
Sbjct:   55 GWCGNTEPYCKQPGCQS--------QCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFF 145

HSP 3 Score: 25.7942 bits (55), Expect = 5.453e-72
Identity = 11/21 (52.38%), Postives = 12/21 (57.14%), Query Frame = 3

Query:  111 SAGNCG---SGVVCPGGECCS 164
            SA  CG    G +CP G CCS
Sbjct:   32 SAEQCGRQAGGALCPNGLCCS 52

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 9.257e-72
Identity = 82/147 (55.78%), Postives = 98/147 (66.67%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  F AQT HETTGGW  AP G YAWGYC+ RE G+  + YC P+  +PC    KYYGRGPIQ+S+NYNY +            NNPDL+ATD V+SFK+A WFWMT Q  KPSCH VI   W PS  D +AGRLPG+G+  NI
Sbjct:  117 KREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLV--NNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNI 260

HSP 2 Score: 110.923 bits (276), Expect = 9.257e-72
Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 2

Query:  170 GWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 460
            GWCG T DYC  GCQS C+                 G++G++I+R MF D+L++RN+  CP + FYTYDAFI AAKAFP FG +G+ T RKREIAAF
Sbjct:   42 GWCGNTADYCGSGCQSQCSST---------------GDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAF 123

HSP 3 Score: 31.9574 bits (71), Expect = 9.257e-72
Identity = 14/23 (60.87%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  108 GSAGNCGS---GVVCPGGECCSR 167
            GSA  CG    G VCPGG CCS+
Sbjct:   18 GSAEQCGGQAGGRVCPGGACCSK 40

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.205e-71
Identity = 90/149 (60.40%), Postives = 104/149 (69.80%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  F AQT HETTGG  W  AP G YAWGYC+NRE+   SS YC  DPNYPC  GK Y+GRGP+QLSWNYNY +C           NNPDLL++DP +SFKSA WFWMT Q  KPSCH VII  W PS++D  AGR+PGYG+  NI
Sbjct:  126 KREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLL--NNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNI 270

HSP 2 Score: 102.064 bits (253), Expect = 1.205e-71
Identity = 52/98 (53.06%), Postives = 62/98 (63.27%), Query Frame = 2

Query:  170 GWCGLTTDYCC-EGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 460
            GWCG T DYC   GCQS C+           G A   G L  +ISR+ F  +L +RND  CPAR FYTYDAFI AA++FPAF  +G++  RKREIAAF
Sbjct:   44 GWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAF 132

HSP 3 Score: 30.8018 bits (68), Expect = 1.205e-71
Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  108 GSAGNCG---SGVVCPGGECCSR 167
            GSA  CG    G +CPGG CCS+
Sbjct:   20 GSAEQCGRQAGGALCPGGLCCSQ 42

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 7.659e-71
Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  F  QT HETTGGWP AP G YAWGYCF RE   ++       +PC    +YYGRGPIQ+SWNYNY +C           NNPDL+ATDPV+SFK+A+WFWMT Q  KPSCH+VI   W PS+ D  AGRLPGYG   NI
Sbjct:  120 KREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLL--NNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNI 262

HSP 2 Score: 100.908 bits (250), Expect = 7.659e-71
Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 2

Query:  170 GWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 460
            GWCG T++YC +GCQS C+           G++G GG L  +IS   F ++L++RND  C  + FYTYDAF+ AAKAFP F N G+   +KREIAAF
Sbjct:   42 GWCGSTSEYCGDGCQSQCS-----------GSSG-GGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAF 126

HSP 3 Score: 29.261 bits (64), Expect = 7.659e-71
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 3

Query:  111 SAGNCGS---GVVCPGGECCSR 167
            SA  CG+   G +CPGG CCS+
Sbjct:   19 SAEQCGTQAGGALCPGGLCCSK 40

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.659e-71
Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K+++  FF QT HETTGGW  AP G Y+WGYCF +E    SS+YC P+  +PC     YYGRGP+QLSWNYNY +C           NNPDL++ DPV++FK+AIWFWMT Q  KPSCH VI+ +W+PS  D  AGR+PGYG+  NI
Sbjct:  123 KKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNP-SSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLL--NNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNI 266

HSP 2 Score: 106.686 bits (265), Expect = 7.659e-71
Identity = 55/99 (55.56%), Postives = 65/99 (65.66%), Query Frame = 2

Query:  170 GWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            GWCG T  YC + GCQS C     G   P     G  G+L  IISR  F+D+L++RND  CPAR FYTYDAFI AAK+FP FG +G+   RK+EIAAFF
Sbjct:   42 GWCGDTEAYCKQPGCQSQC-----GGTPP-----GPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFF 130

HSP 3 Score: 24.2534 bits (51), Expect = 7.659e-71
Identity = 8/16 (50.00%), Postives = 9/16 (56.25%), Query Frame = 3

Query:  117 GNCGSGVVCPGGECCS 164
            G    G +CP G CCS
Sbjct:   24 GRQAGGALCPNGLCCS 39

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.975e-71
Identity = 86/147 (58.50%), Postives = 102/147 (69.39%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  FFAQT HETTGGW  AP G YAWGYC+ RE G+   DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSA+WFWMT Q  KPSCH+VII  W+PS+ D  A RLPG+G+  NI
Sbjct:  127 KREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPG-DYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNI 270

HSP 2 Score: 107.457 bits (267), Expect = 9.975e-71
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 2

Query:  170 GWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 463
            GWCG T DYC  G CQS C         P   T   GG+LG IIS  MF+ +L++RND  C  + FY+Y+AFI AA++FP FG SG+ T RKREIAAFF
Sbjct:   45 GWCGNTNDYCGPGNCQSQC---------PGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFF 134

HSP 3 Score: 23.483 bits (49), Expect = 9.975e-71
Identity = 11/22 (50.00%), Postives = 12/22 (54.55%), Query Frame = 3

Query:  111 SAGNCGS---GVVCPGGECCSR 167
            SA  CGS   G  C  G CCS+
Sbjct:   22 SAEQCGSQAGGARCASGLCCSK 43

[Close]

BLAST of CK934825 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.299e-70
Identity = 81/145 (55.86%), Postives = 94/145 (64.83%), Query Frame = 3

Query:  441 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPSKPSCHEVIIDEWKPSANDVNAGRLPGYGLTXNI 869
            K ++  F  QT HETTGGW  AP G YAWGYCF RE   ++     P +PC    +YYGRGPIQ+SWNYNY +C           N PDL+ATD V+SFKSA+WFWMTAQ  KPS H+VI   W PS+ DV A RLPGYG   NI
Sbjct:  128 KREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLL--NKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNI 270

HSP 2 Score: 108.612 bits (270), Expect = 1.299e-70
Identity = 52/97 (53.61%), Postives = 64/97 (65.98%), Query Frame = 2

Query:  170 GWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 460
            GWCG TTDYC  GCQS C            G +    +L  +ISR  F+ +L++RND  CPA+ FYTYDAFI AAKA+P+FGN+G+   RKREIAAF
Sbjct:   49 GWCGSTTDYCGPGCQSQCG-----------GPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAF 134

HSP 3 Score: 28.1054 bits (61), Expect = 1.299e-70
Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 3

Query:  117 GNCGSGVVCPGGECCSR 167
            G    G +CPGG CCS+
Sbjct:   31 GRQAGGALCPGGNCCSQ 47

The following BLAST results are available for this feature:

BLAST of CK934825 vs. ExPASy Swiss-Prot

BLAST of CK934825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56


Match Name	E-value	Identity	Description
CHI1_THECC	5.060e-73	60.40	Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S...	[more]
CHI1_TOBAC	1.455e-72	59.18	Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1...	[more]
CHI6_POPTR	2.357e-72	57.14	Acidic endochitinase WIN6 OS=Populus trichocarpa G...	[more]
CHIB_ARATH	5.453e-72	58.50	Basic endochitinase B OS=Arabidopsis thaliana GN=C...	[more]
CHIB_VITVI	9.257e-72	55.78	Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE...	[more]
CHI1_GOSHI	1.205e-71	60.40	Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1	[more]
CHI2_PEA	7.659e-71	56.55	Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=...	[more]
CHI2_BRANA	7.659e-71	55.78	Endochitinase CH25 OS=Brassica napus PE=2 SV=1	[more]
CHI2_TOBAC	9.975e-71	58.50	Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1...	[more]
CHIT_PHAVU	1.299e-70	55.86	Endochitinase OS=Phaseolus vulgaris PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CGF1004226_C09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_C09 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK934825 ID=CK934825; Name=CK934825; organism=Citrus sinensis; type=EST; length=870bp
GGGGATACACCAAGCAGAGGATAATTGATATCATAACTGTTGCTTTCAAA
ATGAGGCTTATTGGGTCCTTACTAATTTTCTCTCTGGTTTTATCTTTTGT
ACTAGGAGGCTCAGCAGGGAACTGTGGAAGCGGCGTTGTGTGCCCAGGAG
GGGAGTGTTGTAGTCGATTGGTTGGTGTGGCCTAACAACAGACTACTGTT
GTGAAGGCTGCCAAAGTAACTGTAATCAGGTTGTTTGCGGTGAATGTGAT
CCCGACGACGGGACGGCTGGTGATGGCGGTGAACTGGGCAAGATCATCTC
AAGGAAGATGTTTGAAGACTTGCTTGAGTATAGAAATGATAAACGATGCC
CTGCCAGATGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCAAAGCT
TTTCCAGCCTTTGGTAATTCTGGAAATGAAACCATGCGTAAAAGAGAAAT
TGCTGCCTTTTTTTGCCCAAACTGGCCACGAAACTACTGGGGGATGGCCC
GATGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTAATAGGGAAGT
TGGCGCTGCGTCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGA
AGTACTATGGCCGAGGTCCAATTCAACTCTCTTGGAATTACAATTACTTA
CGGTGCGGAGAAGGCCTAGGGCTAGGAGAGGAGTTGTTGAACAATCCAGA
CCTTCTTGCTACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCT
GGATGACTGCACAGCCATCAAAGCCATCGTGCCACGAAGTCATTATCGAC
GAATGGAAACCATCAGCAAATGACGTAAACGCCGGCCGGCTTCCGGGATA
CGGTCTAACNNNNAATATAA