CK935228

Overview
NameCK935228
Unique NameCK935228
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6151 contig Csv1_Contig6151:852..1628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: AMP2B_ARATH (Methionine aminopeptidase 2B OS=Arabidopsis thaliana GN=MAP2B PE=2 SV=2)

HSP 1 Score: 323.553 bits (828), Expect = 7.673e-88
Identity = 152/162 (93.83%), Postives = 159/162 (98.15%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 488
            GKVFQVKSIRNLNGHSIG YQIHAGKSVPIVKGGEQTKMEEGEF+AIETF STGKGYVREDLECSHYMKNFD GH+PLRLPRAKQLLATINKNFSTLAFCRRYLDR+GETKYLMALKNLCD+GIVQPYPPLCD+KGSYVSQFEHTILLRPTCKEV+S+GDDY
Sbjct:  278 GKVFQVKSIRNLNGHSIGPYQIHAGKSVPIVKGGEQTKMEEGEFYAIETFGSTGKGYVREDLECSHYMKNFDAGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRIGETKYLMALKNLCDSGIVQPYPPLCDVKGSYVSQFEHTILLRPTCKEVLSKGDDY 439          
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: AMP2A_ARATH (Methionine aminopeptidase 2A OS=Arabidopsis thaliana GN=MAP2A PE=2 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 5.147e-84
Identity = 144/162 (88.89%), Postives = 157/162 (96.91%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 488
            GKV+QVKSIRNLNGHSIGRYQIHA KSVP V+GGEQTKMEEGE +AIETF STGKGYVREDLECSHYMKN+DVGH+PLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCD+GI++P PP+CD+KGSY+SQFEHTILLRPTCKE+IS+GDDY
Sbjct:  280 GKVYQVKSIRNLNGHSIGRYQIHAEKSVPNVRGGEQTKMEEGELYAIETFGSTGKGYVREDLECSHYMKNYDVGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDSGIIEPCPPVCDVKGSYISQFEHTILLRPTCKEIISKGDDY 441          
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: AMPM2_HUMAN (Methionine aminopeptidase 2 OS=Homo sapiens GN=METAP2 PE=1 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.573e-77
Identity = 132/162 (81.48%), Postives = 147/162 (90.74%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 488
            GK +QVK IRNLNGHSIG+Y+IHAGK+VPIVKGGE T+MEEGE +AIETF STGKG V +D+ECSHYMKNFDVGH+P+RLPR K LL  IN+NF TLAFCRR+LDRLGE+KYLMALKNLCD GIV PYPPLCDIKGSY +QFEHTILLRPTCKEV+SRGDDY
Sbjct:  317 GKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478          
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: AMPM2_RAT (Methionine aminopeptidase 2 OS=Rattus norvegicus GN=Metap2 PE=2 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 7.959e-77
Identity = 132/162 (81.48%), Postives = 146/162 (90.12%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 488
            GK +QVK IRNLNGHSIG Y+IHAGK+VPIVKGGE T+MEEGE +AIETF STGKG V +D+ECSHYMKNFDVGH+P+RLPR K LL  IN+NF TLAFCRR+LDRLGE+KYLMALKNLCD GIV PYPPLCDIKGSY +QFEHTILLRPTCKEV+SRGDDY
Sbjct:  317 GKTYQVKPIRNLNGHSIGPYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478          
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: AMPM2_MOUSE (Methionine aminopeptidase 2 OS=Mus musculus GN=Metap2 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.959e-77
Identity = 132/162 (81.48%), Postives = 146/162 (90.12%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 488
            GK +QVK IRNLNGHSIG Y+IHAGK+VPIVKGGE T+MEEGE +AIETF STGKG V +D+ECSHYMKNFDVGH+P+RLPR K LL  IN+NF TLAFCRR+LDRLGE+KYLMALKNLCD GIV PYPPLCDIKGSY +QFEHTILLRPTCKEV+SRGDDY
Sbjct:  317 GKTYQVKPIRNLNGHSIGPYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478          
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: AMPM2_BOVIN (Methionine aminopeptidase 2 OS=Bos taurus GN=METAP2 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.959e-77
Identity = 132/162 (81.48%), Postives = 146/162 (90.12%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 488
            GK +QVK IRNLNGHSIG Y+IHAGK+VPIVKGGE T+MEEGE +AIETF STGKG V +D+ECSHYMKNFDVGH+P+RLPR K LL  IN+NF TLAFCRR+LDRLGE+KYLMALKNLCD GIV PYPPLCDIKGSY +QFEHTILLRPTCKEV+SRGDDY
Sbjct:  316 GKTYQVKPIRNLNGHSIGPYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 477          
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: AMPM2_SCHPO (Methionine aminopeptidase 2 OS=Schizosaccharomyces pombe GN=fma2 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.255e-66
Identity = 120/162 (74.07%), Postives = 133/162 (82.10%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 488
            GK  QVKSIRNL GH++  Y IH GKSVPIVKGGE+ KMEEGE FAIETF STG+G V ED+ECSHY K  D GHIPLRLPRAK LL TI +NF TL FCRRYLDR+GE+KYL+AL NL   GIVQ YPPLCDI+GSY +QFEHTI+L PT KEV+SRGDDY
Sbjct:  265 GKTHQVKSIRNLCGHNLDPYIIHGGKSVPIVKGGEEIKMEEGEIFAIETFGSTGRGVVHEDMECSHYAKIPDAGHIPLRLPRAKALLNTITQNFGTLPFCRRYLDRIGESKYLLALNNLVSAGIVQDYPPLCDIRGSYTAQFEHTIILHPTQKEVVSRGDDY 426          
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: AMPM2_DICDI (Methionine aminopeptidase 2 OS=Dictyostelium discoideum GN=metap2 PE=3 SV=3)

HSP 1 Score: 227.254 bits (578), Expect = 7.484e-59
Identity = 109/162 (67.28%), Postives = 130/162 (80.25%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 488
            GK + ++SIRNLNGHSI  Y IH GK+VPIV+GGE TKMEEGEF+AIETF STG+  V EDLECSHYMK        +RLP+AKQLL  INKN+ TL FCRR+LDR GE K+++AL NLCD GI+Q + PL D KGSYV+Q+EHT+LL+PT KEV+SRGDDY
Sbjct:  277 GKTYPIRSIRNLNGHSIRPYVIHGGKTVPIVRGGEMTKMEEGEFYAIETFGSTGRAQVIEDLECSHYMKTDY--QTTVRLPKAKQLLQYINKNYDTLCFCRRWLDRAGEDKHILALNNLCDLGIIQRHAPLVDSKGSYVAQYEHTLLLKPTAKEVLSRGDDY 436          
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: AMPM2_YEAST (Methionine aminopeptidase 2 OS=Saccharomyces cerevisiae GN=MAP2 PE=1 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 1.974e-51
Identity = 102/162 (62.96%), Postives = 118/162 (72.84%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 488
            G+ +QVK  RNL GHSI  Y+IH GKSVPIVK G+ TKMEEGE FAIETF STG+GYV    E SHY ++ +   +   L  AK LL TI++NF TL FCRRYLDRLG+ KYL AL NL   G+VQ YPPL DI GSY +QFEHTILL    KEV+S+GDDY
Sbjct:  260 GETYQVKPCRNLCGHSIAPYRIHGGKSVPIVKNGDTTKMEEGEHFAIETFGSTGRGYVTAGGEVSHYARSAEDHQVMPTLDSAKNLLKTIDRNFGTLPFCRRYLDRLGQEKYLFALNNLVRHGLVQDYPPLNDIPGSYTAQFEHTILLHAHKKEVVSKGDDY 421          
BLAST of CK935228 vs. ExPASy Swiss-Prot
Match: YD43_CAEEL (Putative uncharacterized protein T27A8.3 OS=Caenorhabditis elegans GN=T27A8.3 PE=5 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.060e-36
Identity = 76/120 (63.33%), Postives = 94/120 (78.33%), Query Frame = 3
Query:    3 GKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVG--HIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKN 356
            G   +VK I +LNG SI + +IH GK+VPIVKGGEQ +MEE E +AIETF STGKGY  +D+E SHYMKNF++    IPLRL ++K LL  I+KNF+TLAFCR ++DRL ETKYLMALK+
Sbjct:   32 GNSNEVKPIGSLNGQSIAQCRIHTGKTVPIVKGGEQARMEENEIYAIETFGSTGKGYFHDDMETSHYMKNFELADEKIPLRLQKSKGLLKLIDKNFATLAFCRCWIDRLEETKYLMALKD 151          
The following BLAST results are available for this feature:
BLAST of CK935228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
AMP2B_ARATH7.673e-8893.83Methionine aminopeptidase 2B OS=Arabidopsis thalia... [more]
AMP2A_ARATH5.147e-8488.89Methionine aminopeptidase 2A OS=Arabidopsis thalia... [more]
AMPM2_HUMAN3.573e-7781.48Methionine aminopeptidase 2 OS=Homo sapiens GN=MET... [more]
AMPM2_RAT7.959e-7781.48Methionine aminopeptidase 2 OS=Rattus norvegicus G... [more]
AMPM2_MOUSE7.959e-7781.48Methionine aminopeptidase 2 OS=Mus musculus GN=Met... [more]
AMPM2_BOVIN7.959e-7781.48Methionine aminopeptidase 2 OS=Bos taurus GN=METAP... [more]
AMPM2_SCHPO8.255e-6674.07Methionine aminopeptidase 2 OS=Schizosaccharomyces... [more]
AMPM2_DICDI7.484e-5967.28Methionine aminopeptidase 2 OS=Dictyostelium disco... [more]
AMPM2_YEAST1.974e-5162.96Methionine aminopeptidase 2 OS=Saccharomyces cerev... [more]
YD43_CAEEL3.060e-3663.33Putative uncharacterized protein T27A8.3 OS=Caenor... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_D01 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935228 ID=CK935228; Name=CK935228; organism=Citrus sinensis; type=EST; length=775bp
GGGGAAAGGTGTTTCAAGTTAAAAGTATCCGGAACTTGAATGGACACAGC
ATTGGGCGTTATCAGATCCATGCTGGAAAGTCTGTTCCAATTGTGAAAGG
AGGGGAGCAGACAAAGATGGAAGAGGGTGAATTTTTCGCAATTGAAACCT
TTGCGTCAACAGGGAAAGGATATGTCAGAGAAGATCTTGAGTGCAGCCAT
TACATGAAAAATTTTGATGTTGGCCACATCCCACTGAGGCTTCCCAGAGC
CAAGCAACTATTAGCAACAATCAACAAGAATTTCTCTACATTGGCATTCT
GTAGACGGTATTTAGATCGCCTTGGAGAGACTAAATATCTGATGGCCCTG
AAGAATTTGTGTGATACTGGCATTGTTCAGCCATATCCTCCTCTCTGCGA
CATTAAGGGCAGCTATGTGTCTCAGTTTGAGCATACCATCTTACTACGGC
CGACCTGCAAAGAGGTGATATCCAGAGGAGATGACTACTGAAGTGGATGA
TATTAAAATTTTGTCAATAACTTATCCGCACGATTGCTGTACACCTTTTA
CCGTTTGGACTGTAAAATTTTCTGTTTGAAACCTCTTATTTGAGTGGAAG
TGACGACGATGTTAGCTTCTCTTAGCTTAATGGTTTATAGCTTGAGGCAG
AGCCAGGAGTAGATCAGTGTTTACTACCTATGTGATTATGCTGGTCGGCA
GAGGTTTTGTTCTCTTGGTAATGATTCAATAAAATTTATTCACAGCAAAC
AAAAAAAAAAAAAAAAAAAAAAAAA
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