CK935248

Overview
NameCK935248
Unique NameCK935248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7093 contig Csv1_Contig7093:621..1397. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935248 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.062e-40
Identity = 83/170 (48.82%), Postives = 112/170 (65.88%), Query Frame = 3
Query:    3 AINSVSFIPADTPLKLADYFKIGG-VFRIGSISDNPTGGGIYQ---DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 500
            A+N VS    +TPLKLA+YF I   VF+  +I+D+PT   I     +  V+   +R F+E+VF+N E  +QS+HL+GY F+ V ++ G WT   R  YNL DAV+R TVQVYPK W+AI +  DN GMWN+RSE+  R+YLGQQ Y  V +   SLRDEY +P+ +  CG
Sbjct:  371 ALNGVSHTEPETPLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCG 540          
BLAST of CK935248 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.334e-38
Identity = 77/172 (44.77%), Postives = 104/172 (60.47%), Query Frame = 3
Query:    6 INSVSFIPADTPLKLADYF-KIGGVFRIGSISDNPTG--GGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAG 512
            +N +S    +TPLKL +YF      F+   ++D        +   T V  A YR F+EI+F+N E  I++YHL+GY F+ V ++ G+W+   R  YNL D ++R  +QVYP SW+AI +  DN GMWNLRSE W + YLG+Q Y  V + S SLRDEY IP N  LCG   G
Sbjct:  374 LNGISHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPSKLTIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGLSRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPDNHPLCGIVKG 545          
BLAST of CK935248 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.081e-36
Identity = 73/165 (44.24%), Postives = 104/165 (63.03%), Query Frame = 3
Query:    6 INSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 500
            +N +SF    TP++LAD  K+  V+++      P  G     T+++   YR F+E+V QN++  +QSYH++GY F+VVGMD G+WT  SR  YN  D +AR T+QVYP +WSAI I+LDN G WNLR+E+    YLGQ+ Y+RV     + + E+  P N   CG
Sbjct:  385 LNGISFKNPSTPIRLADKLKVKDVYKL-DFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCG 548          
BLAST of CK935248 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.407e-35
Identity = 67/165 (40.61%), Postives = 106/165 (64.24%), Query Frame = 3
Query:    6 INSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 500
            +N +SF+   TP++LAD  K+ G +++    D P    +  D +++ A Y+ FI++VFQN++  IQS+H++GY F+VVGMD G W+   +  YN  DA++R T++VYP  W+A+ I+LDNVG+WN+R E+  R YLG++ Y+R+       + E   P N   CG
Sbjct:  388 LNGISFVNPSTPVRLADRNKVKGAYKL-DFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDNVLYCG 551          
BLAST of CK935248 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.096e-33
Identity = 68/166 (40.96%), Postives = 107/166 (64.46%), Query Frame = 3
Query:    6 INSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQ-DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 500
            +N +SF+   TP++LAD  K+ G + +    D P    + +  ++++ A Y+ FI+++FQN++  IQS+H++GY F+VV MD G W+    + YN  DAVAR TV+VYP +W+A+ I+LDNVG+WN+R E+  R YLGQ+ Y+R+     +   E   P+N   CG
Sbjct:  387 LNGISFVNPSTPMRLADDHKVKGDYML-DFPDRPLDEKLPRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCG 551          
The following BLAST results are available for this feature:
BLAST of CK935248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ASOL_BRANA2.062e-4048.82L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
ASOL_TOBAC7.334e-3844.77L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
SKU5_ARATH3.081e-3644.24Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS1_ARATH3.407e-3540.61Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKS2_ARATH1.096e-3340.96Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004564_B08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935248 ID=CK935248; Name=CK935248; organism=Citrus sinensis; type=EST; length=777bp
GGGCAATCAACAGCGTGTCCTTTATTCCAGCTGACACTCCCCTAAAGCTT
GCTGACTACTTCAAGATTGGAGGAGTTTTCCGCATCGGAAGCATTTCTGA
TAATCCTACCGGTGGAGGGATTTACCAAGACACAGCAGTTATGGGGGCTG
ACTACAGAGCTTTTATTGAAATTGTGTTCCAAAATGATGAAGACATTATC
CAGAGCTATCACCTTAATGGCTACCAATTTTGGGTTGTCGGTATGGATGG
AGGCCAATGGACATCTGCTAGTAGAAACCAGTACAATCTCCGCGATGCAG
TTGCCCGTGTAACCGTTCAGGTGTATCCCAAGTCATGGTCTGCGATTTAT
ATAGCACTGGATAACGTAGGTATGTGGAACTTGAGGTCTGAGTCTTGGGC
ACGACAGTACCTTGGACAACAATTTTACTTGCGTGTTTACACAGCATCAA
CTTCACTCAGGGATGAATATCCCATCCCAAAGAATGCACGTCTTTGCGGC
AAAGCAGCTGGCAGACACACGAGGCCCCTCTAAATTATTATTTAATAAAA
TGATCCACCGTTGGGTACGCAATTTGTGGATTCGAGTAGAATTTTGATTT
CTAATCTTATATTCGATTAGTTTAATGTTGCTTTGCTTATTTATGCGAGG
AGTGTGTACAAGTGGAACTTGAAATTGACCCCAGCTCGAGGTCTCATTCT
TCTCTATTGAAGGTTGTATTTCCGTTGTTACAGCGGTAGCTGTTATAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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