CK935285

Overview
NameCK935285
Unique NameCK935285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7404 contig Csv1_Contig7404:73..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: SMT1_ARATH (Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=2 SV=1)

HSP 1 Score: 453.366 bits (1165), Expect = 7.609e-127
Identity = 212/242 (87.60%), Postives = 228/242 (94.21%), Query Frame = 1
Query:  127 DLASGVGGKIDKTEVLSAVEKYEKYHVCYGGEEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            DLAS +GGKIDK++VL+AVEKYE+YHV +GG EEERKANYTDMVNKYYDL TSFYE+GWGESFHFA RWKGESL+ESIKRHEHFLALQLG++ GQKVLDVGCGIGGPLREIARFS++ VTGLNNNEYQITRGKELNR AGVDKTCNFVKADFMKMPFP+NSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWC+TDAFDP+N EH+KIK EIEIGDGLPDI  T KCLEALK AG
Sbjct:    2 DLASNLGGKIDKSDVLTAVEKYEQYHVFHGGNEEERKANYTDMVNKYYDLATSFYEYGWGESFHFAQRWKGESLRESIKRHEHFLALQLGIQPGQKVLDVGCGIGGPLREIARFSNSVVTGLNNNEYQITRGKELNRLAGVDKTCNFVKADFMKMPFPENSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCMTDAFDPDNAEHQKIKGEIEIGDGLPDIRLTTKCLEALKQAG 243          
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: SMT1_ORYSJ (Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Smt1-1 PE=2 SV=1)

HSP 1 Score: 425.631 bits (1093), Expect = 1.699e-118
Identity = 199/249 (79.92%), Postives = 221/249 (88.76%), Query Frame = 1
Query:  106 MSKAGAFDLASGVGGKIDKTEVLSAVEKYEKYHVCYGGEEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            MS++GA DLASG+GGKI K EV SAV++YEKYH  YGG+EE RK+NYTDMVNKYYDL TSFYE+GWGESFHFA RW GESL+ESIKRHEHFLALQLG+K G KVLDVGCGIGGPLREIA+FS  SVTGLNNNEYQITRGKELNR AGV  TC+FVKADFMKMPF DN+FDAVYAIEATCHAPD  GCYKEIYRVLKPGQCFA YEWC+TD ++PNN  HK+IK EIE+G+GLPDI ST++CL+A K AG
Sbjct:    1 MSRSGAMDLASGLGGKITKDEVKSAVDEYEKYHGYYGGKEEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPGMKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATHKRIKDEIELGNGLPDIRSTQQCLQAAKDAG 249          
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: SMT1_DICDI (Probable cycloartenol-C-24-methyltransferase 1 OS=Dictyostelium discoideum GN=smt1 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.250e-70
Identity = 120/209 (57.42%), Postives = 151/209 (72.25%), Query Frame = 1
Query:  226 EERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            + RK NYT MVN +YDL T FYEFGWG+SFHFA R K ES + SI RHE ++A QLGL  G KV+D+GCG+GGP+R IARFS  +V GLNNNEYQI RGK LN  AG+   C+F+KADFM +P  DN++D  Y IEATCHAPD  G YKE++R++KPG  F  YEW +T+ F+P +     IK +IE+G+GLPD+    + + A K AG
Sbjct:   52 QARKNNYTHMVNTFYDLATDFYEFGWGQSFHFATRHKYESFEASIARHEMYMAHQLGLFPGMKVIDIGCGVGGPMRTIARFSGANVVGLNNNEYQIQRGKRLNESAGLSHLCSFIKADFMHVPVEDNTYDCAYQIEATCHAPDLVGLYKEVFRIVKPGGLFGGYEWIMTNKFNPEDPVEVNIKKQIELGNGLPDLVKPAEIINAAKAAG 260          
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: ERG6_YEAST (Sterol 24-C-methyltransferase OS=Saccharomyces cerevisiae GN=ERG6 PE=1 SV=4)

HSP 1 Score: 249.98 bits (637), Expect = 1.278e-65
Identity = 116/210 (55.24%), Postives = 146/210 (69.52%), Query Frame = 1
Query:  223 EEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            EE R  +Y +  + YY++VT FYE+GWG SFHF+  +KGES   SI RHEH+LA + G++ G  VLDVGCG+GGP REIARF+  +V GLNNN+YQI + K   +   +    +FVK DFMKM F +N+FD VYAIEATCHAP   G Y EIY+VLKPG  FA YEW +TD +D NN EH+KI  EIE+GDG+P +       +ALK  G
Sbjct:   59 EERRLEDYNEATHSYYNVVTDFYEYGWGSSFHFSRFYKGESFAASIARHEHYLAYKAGIQRGDLVLDVGCGVGGPAREIARFTGCNVIGLNNNDYQIAKAKYYAKKYNLSDQMDFVKGDFMKMDFEENTFDKVYAIEATCHAPKLEGVYSEIYKVLKPGGTFAVYEWVMTDKYDENNPEHRKIAYEIELGDGIPKMFHVDVARKALKNCG 268          
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: ERG6_ASHGO (Sterol 24-C-methyltransferase OS=Ashbya gossypii GN=ERG6 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.847e-65
Identity = 115/210 (54.76%), Postives = 147/210 (70.00%), Query Frame = 1
Query:  223 EEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            EE R A+Y +  + YY++VT FYE+GWG SFHF+  + GES   S+ RHEH+LA + G+ SG  VLDVGCG+GGP REIARF+   V GLNNN+YQI +GK  +R  G+    ++VK DFM M FPD +FD VYAIEATCHAP   G Y EIYRVLKPG  FA YEW +T+ +D  N EH++I  +IE+GDG+P + S +   +AL   G
Sbjct:   60 EERRLADYNESTHSYYNVVTDFYEYGWGASFHFSRFYTGESFAMSMARHEHYLAHRAGITSGDLVLDVGCGVGGPAREIARFTGCRVVGLNNNDYQIMKGKHYSRKLGLGDQVSYVKGDFMNMDFPDATFDKVYAIEATCHAPSFEGVYGEIYRVLKPGGVFAVYEWVMTENYDETNPEHRRIAYDIELGDGIPKMYSVKVARDALAKVG 269          
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: ERG6_YARLI (Sterol 24-C-methyltransferase OS=Yarrowia lipolytica GN=ERG6 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.157e-64
Identity = 110/211 (52.13%), Postives = 146/211 (69.19%), Query Frame = 1
Query:  220 EEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            +E+ R  +Y  +   YY+LVT FYE+GWG SFHF+  +KGE+ +++  RHEH+LA ++G++ G KVLDVGCG+GGP REIARF+  ++ GLNNN+YQ+ RG   +   G      +VK DFM+M FPDNSFDAVYAIEAT HAP   G Y EI+RVLKPG  F  YEW +TD +D +N EH+ I   IE GDG+P +      ++AL+  G
Sbjct:   67 DEQGRIEDYAGLTKHYYNLVTDFYEYGWGSSFHFSRYYKGEAFRQATARHEHYLAYKMGIQPGMKVLDVGCGVGGPAREIARFTGANIVGLNNNDYQVERGTHYSEVQGFGDQVTYVKGDFMQMDFPDNSFDAVYAIEATVHAPVLEGVYSEIFRVLKPGGVFGVYEWVMTDEYDESNPEHRDICYGIEKGDGIPKMYKREVAVKALENVG 277          
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: ERG6_KLULA (Sterol 24-C-methyltransferase OS=Kluyveromyces lactis GN=ERG6 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.664e-63
Identity = 115/234 (49.15%), Postives = 154/234 (65.81%), Query Frame = 1
Query:  157 DKTEVLSAVEKYEKYHVCYGGEEEERKA--NYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            +K+    AV KY K+       + ER+   +Y +  + YY++VT FYE+GWG SFHF+  +KGES   S+ RHEH+LA + G+K    +LDVGCG+GGP R I+RF+  ++ GLNNN+YQI +     +   +D   +FVK DFMKM F +N+FD+VYAIEATCHAP   G Y EIY+VLKPG  FA YEW +TD +D  N EH+KI  EIE+GDG+P + S     +AL   G
Sbjct:   35 NKSAQTEAVAKYLKHWDGKTDADAERRRLEDYNESTHSYYNVVTDFYEYGWGSSFHFSRFFKGESFSASVARHEHYLAYKAGIKENDLILDVGCGVGGPARTISRFTGCNIIGLNNNDYQIQKANYYAKRDHLDSKLSFVKGDFMKMEFDENTFDSVYAIEATCHAPTFEGVYGEIYKVLKPGGTFAVYEWVMTDKYDETNPEHRKIAYEIELGDGIPKMYSVDAARDALSKVG 268          
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: ERG6_CANGA (Sterol 24-C-methyltransferase OS=Candida glabrata GN=ERG6 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.012e-62
Identity = 110/210 (52.38%), Postives = 144/210 (68.57%), Query Frame = 1
Query:  223 EEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            E+ R  +Y +  + YY++VT FYE+GWG SFHF+  +KGE+ Q ++ RHE +LA   G+K G  VLDVGCG+GGP R IARF+  ++ GLNNN+YQI + K   +   +    +FVK DFM M F  NSFD VYAIEATCHAP   G Y EIY+VLKPG  FA YEW +T+ +D NN+EH+KI  EIE+GDG+P + +     +ALK  G
Sbjct:   59 EDRRLEDYNEATHSYYNVVTDFYEYGWGSSFHFSRFYKGENFQAAMARHEQYLAYMAGIKKGDLVLDVGCGVGGPARTIARFTGCNIIGLNNNDYQIQKAKYYAKKYNLQDHMDFVKGDFMNMEFEPNSFDKVYAIEATCHAPKLEGVYGEIYKVLKPGGTFAVYEWVMTENYDENNEEHRKIAYEIELGDGIPKMFTVDVAKQALKNVG 268          
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: ERG6_CANAL (Sterol 24-C-methyltransferase OS=Candida albicans GN=ERG6 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.255e-62
Identity = 110/211 (52.13%), Postives = 145/211 (68.72%), Query Frame = 1
Query:  220 EEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            +EE+R  +Y+ + + YY+LVT FYE+GWG SFHF+  +KGE+ +++  RHEHFLA ++ L    KVLDVGCG+GGP REI RF+   + GLNNN+YQI R     +   +D   ++VK DFM+M F   SFDAVYAIEAT HAP   G Y EIY+VLKPG  F  YEW +TD +D  N+EH+KI   IE+GDG+P + S +   +ALK  G
Sbjct:   61 DEEKRLNDYSQLTHHYYNLVTDFYEYGWGSSFHFSRYYKGEAFRQATARHEHFLAHKMNLNENMKVLDVGCGVGGPGREITRFTDCEIVGLNNNDYQIERANHYAKKYHLDHKLSYVKGDFMQMDFEPESFDAVYAIEATVHAPVLEGVYSEIYKVLKPGGIFGVYEWVMTDKYDETNEEHRKIAYGIEVGDGIPKMYSRKVAEQALKNVG 271          
BLAST of CK935285 vs. ExPASy Swiss-Prot
Match: ERG6_DEBHA (Sterol 24-C-methyltransferase OS=Debaryomyces hansenii GN=ERG6 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.462e-61
Identity = 109/211 (51.66%), Postives = 144/211 (68.25%), Query Frame = 1
Query:  220 EEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIXSTRKCLEALKXAG 852
            +E++R ++Y+++   YY+LVT FYE+GWG SFHF+  + GE+ +++  RHEHFLA ++ +    KVLDVGCG+GGP REI RF+  S+ GLNNN+YQI R     R   +D   +FVK DFM+M F   SFDAVYAIEAT HAP   G Y EIY+VLKPG  F  YEW +TD +D  N+EH+KI   IE+GDG+P +       +ALK  G
Sbjct:   62 DEDKRLSDYSNLTAHYYNLVTDFYEYGWGSSFHFSRYYTGEAFRQATARHEHFLAHKMQINENMKVLDVGCGVGGPAREICRFTDCSIVGLNNNDYQIERANHYARKYKLDDKLSFVKGDFMQMDFEAESFDAVYAIEATVHAPVLEGVYSEIYKVLKPGGVFGVYEWVMTDKYDDENEEHRKIAYGIEVGDGIPKMYKREVAEKALKSVG 272          
The following BLAST results are available for this feature:
BLAST of CK935285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SMT1_ARATH7.609e-12787.60Cycloartenol-C-24-methyltransferase OS=Arabidopsis... [more]
SMT1_ORYSJ1.699e-11879.92Cycloartenol-C-24-methyltransferase 1 OS=Oryza sat... [more]
SMT1_DICDI2.250e-7057.42Probable cycloartenol-C-24-methyltransferase 1 OS=... [more]
ERG6_YEAST1.278e-6555.24Sterol 24-C-methyltransferase OS=Saccharomyces cer... [more]
ERG6_ASHGO2.847e-6554.76Sterol 24-C-methyltransferase OS=Ashbya gossypii G... [more]
ERG6_YARLI9.157e-6452.13Sterol 24-C-methyltransferase OS=Yarrowia lipolyti... [more]
ERG6_KLULA2.664e-6349.15Sterol 24-C-methyltransferase OS=Kluyveromyces lac... [more]
ERG6_CANGA1.012e-6252.38Sterol 24-C-methyltransferase OS=Candida glabrata ... [more]
ERG6_CANAL2.255e-6252.13Sterol 24-C-methyltransferase OS=Candida albicans ... [more]
ERG6_DEBHA1.462e-6151.66Sterol 24-C-methyltransferase OS=Debaryomyces hans... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_G05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935285 ID=CK935285; Name=CK935285; organism=Citrus sinensis; type=EST; length=857bp
GGGGAAAGCTCCTTCAGTCTTCACACACAACAGAAACACACCTTCTCTCT
GTTCCGAATTCTCCTTCTCTTTTTGCGGCTCTTTCAACATCGGTATATTG
CGAGAATGTCGAAGGCTGGAGCTTTTGATTTGGCTTCTGGAGTGGGCGGA
AAGATTGATAAAACCGAAGTGCTCTCCGCCGTCGAAAAGTATGAGAAGTA
TCATGTCTGTTATGGAGGTGAAGAGGAAGAGAGAAAAGCTAACTACACTG
ACATGGTTAATAAATATTATGATCTTGTTACCAGCTTTTATGAGTTTGGC
TGGGGGGAGTCATTCCATTTTGCACCAAGATGGAAAGGAGAGTCTCTTCA
GGAGAGTATCAAGCGACATGAGCACTTCCTTGCTTTGCAACTTGGCCTTA
AATCTGGGCAGAAGGTTTTGGATGTTGGATGTGGAATTGGTGGACCCTTG
AGAGAAATTGCTCGATTCAGCTCAACATCAGTTACTGGGTTGAACAACAA
TGAGTATCAGATAACAAGAGGAAAGGAATTAAACCGCTTTGCAGGAGTGG
ACAAGACCTGCAACTTTGTAAAGGCTGACTTCATGAAAATGCCATTTCCT
GACAATAGTTTTGATGCTGTGTATGCAATTGAAGCAACCTGTCATGCTCC
AGATGCATATGGATGCTACAAAGAGATTTACAGAGTATTAAAGCCTGGCC
AATGTTTTGCTGCATATGAATGGTGCTTGACTGATGCGTTTGATCCAAAC
AATCAAGAACATAAAAAAATTAAGGCGGAAATCGAGATTGGTGATGGGCT
TCCAGACATCANGTCGACTAGAAAATGCTTGGAAGCTCTGAAANNNGCTG
GTTTNGA
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