CK935286

Overview
NameCK935286
Unique NameCK935286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4610 contig Csv1_Contig4610:83..424. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.374e-33
Identity = 75/103 (72.82%), Postives = 77/103 (74.76%), Query Frame = 3
Query:   45 MAKDIEVGGQ--GEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTD--ANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAKDIE  G   GEF AKDY DPPPAPLIDAEELTQWS YRA IAEFIATLLFLYITV TVIGYK QTD  A+             IAWAFGGMIF+LVYCTA
Sbjct:    1 MAKDIEASGPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTA 103          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.625e-32
Identity = 70/101 (69.31%), Postives = 77/101 (76.24%), Query Frame = 3
Query:   45 MAKDIE-VGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDAN-HXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAKD+E V  QGE+ AKDYHDPPPAPLID +ELT+WS YRA IAEFIATLLFLYITVLT+IGYK Q+D                IAWAFGGMIF+LVYCTA
Sbjct:    1 MAKDVEQVTEQGEYSAKDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTA 101          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.637e-32
Identity = 72/103 (69.90%), Postives = 75/103 (72.82%), Query Frame = 3
Query:   45 MAKDIEVGGQ--GEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDA--NHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAKDIE      GEF AKDY DPPPAPLID EELT+WS YRA IAEFIATLLFLYITV TVIGYK Q+DA  N             IAWAFGGMIF+LVYCTA
Sbjct:    1 MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTA 103          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 9.974e-32
Identity = 71/104 (68.27%), Postives = 76/104 (73.08%), Query Frame = 3
Query:   45 MAKDIEVGGQ---GEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTD--ANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAKDIE       GE+ AKDY DPPPAPLIDAEELT+WS YRA IAEF+ATLLFLYITV TVIGYK Q+D  AN             IAWAFGGMIF+LVYCTA
Sbjct:    1 MAKDIEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTA 104          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.790e-31
Identity = 73/104 (70.19%), Postives = 77/104 (74.04%), Query Frame = 3
Query:   45 MAK-DIEVGGQ--GEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTD--ANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAK DIE  G   GEF AKDY DPPPAPLIDA+ELT+WS YRA IAEFIATLLFLYITV TVIGYK QTD  A+             IAWAFGGMIF+LVYCTA
Sbjct:    1 MAKQDIEASGPEAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTA 104          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.457e-30
Identity = 66/100 (66.00%), Postives = 74/100 (74.00%), Query Frame = 3
Query:   45 MAKDIE-VGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAKD+E V G+G F  +DY DPPPAP ID  EL +WSFYRA IAEF+ATLLFLYITVLTVIGYK Q+D +             IAWAFGGMIF+LVYCTA
Sbjct:    1 MAKDVEAVPGEG-FQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTA 99          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.190e-30
Identity = 68/101 (67.33%), Postives = 73/101 (72.28%), Query Frame = 3
Query:   45 MAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTD--ANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAKDIE     E   KDY DPPPAPL+DAEELT+WS YRA IAEF+ATLLFLYITV TVIGYK QTD  A+             IAWAFGGMIF+LVYCTA
Sbjct:    1 MAKDIEAAAAHE--GKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTA 99          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.473e-30
Identity = 62/99 (62.63%), Postives = 71/99 (71.72%), Query Frame = 3
Query:   45 MAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAKD++V   G   A+DY DPPPAP  D EEL +W  YRA IAEF+ATLLFLY+++LTVIGYK+QTDA              IAWAFGGMIFVLVYCTA
Sbjct:    1 MAKDLDVNESGPPAARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTA 99          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.473e-30
Identity = 63/99 (63.64%), Postives = 70/99 (70.71%), Query Frame = 3
Query:   45 MAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAKD+E  G   F  +DY DPPP P  DAEELT+WS YRA IAEF+ATLLFLY+TVLTVIGYK Q+D               IAWAFGGMIF+LVYCTA
Sbjct:    1 MAKDVE--GPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTA 97          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 9.335e-30
Identity = 73/104 (70.19%), Postives = 74/104 (71.15%), Query Frame = 3
Query:   45 MAKD--IEVG-GQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTD--ANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            M KD  IE G G GEF AKDY DPPPAPLIDA EL  WS YRA IAEFIATLLFLYITV TVIGYK QTD  A+             IAWAFGGMIFVLVYCTA
Sbjct:    1 MGKDDVIESGAGGGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTA 104          
The following BLAST results are available for this feature:
BLAST of CK935286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PIP24_MAIZE2.374e-3372.82Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP27_MAIZE2.625e-3269.31Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP22_ORYSJ7.637e-3269.90Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP23_ORYSJ9.974e-3268.27Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP23_MAIZE3.790e-3170.19Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP21_ARATH2.457e-3066.00Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP25_MAIZE4.190e-3067.33Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP24_ARATH5.473e-3062.63Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP23_ARATH5.473e-3063.64Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP21_MAIZE9.335e-3070.19Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_D09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935286 ID=CK935286; Name=CK935286; organism=Citrus sinensis; type=EST; length=342bp
TTTTTTTTTTTTTTTAAATTCTCAGTGAAGACCAATCCGTAGCAATGGCC
AAGGACATTGAGGTTGGTGGGCAAGGCGAGTTCCATGCTAAGGATTACCA
TGACCCTCCGCCAGCTCCATTGATCGATGCCGAGGAGCTCACCCAATGGT
CATTTTACAGGGCTACTATAGCTGAGTTCATCGCCACGCTCTTGTTTTTG
TACATTACTGTGCTGACAGTGATTGGTTACAAAAGCCAGACGGACGCCAA
CCACGGCGGTGACGGATGTGGTGGTGTTGGCATTCTGGGCATCGCTTGGG
CCTTTGGTGGCATGATCTTTGTTCTTGTTTACTGCACTGCTG
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