CK935301

Overview
NameCK935301
Unique NameCK935301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1791 contig Csv1_Contig1791:1..824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: AKH1_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.185e-91
Identity = 167/192 (86.98%), Postives = 184/192 (95.83%), Query Frame = 2
Query:    5 RIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 580
            RIEGIFSGTLSYLFN+FVGTRSFSEVV EAK+AG+TEPDPRDDLSGTDVARKV ILARESGLKL+L  LPVQ+LVP+PL+ACASAEEFM++LPQFD+EL+KQR+EAE AGEVLRYVGVVDA+ K+G VEL+RYK+DHPFAQLSG+DNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLA YLGAPS
Sbjct:  720 RIEGIFSGTLSYLFNNFVGTRSFSEVVAEAKQAGFTEPDPRDDLSGTDVARKVTILARESGLKLDLEGLPVQNLVPKPLQACASAEEFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGAPS 911          
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: AKH2_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.953e-88
Identity = 160/192 (83.33%), Postives = 181/192 (94.27%), Query Frame = 2
Query:    5 RIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 580
            RIEGI SGTLSYLFN+FVG RSFSEVVTEAK AG+TEPDPRDDLSGTDVARKVIILARESGLKL+L+DLP++SLVPEPLK C S EEFM++LPQ+D +LAK+R +AE++GEVLRYVGVVDA+N++G VELRRYK++HPFAQL+GSDNIIAFTT RYK+ PLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS
Sbjct:  725 RIEGICSGTLSYLFNNFVGDRSFSEVVTEAKNAGFTEPDPRDDLSGTDVARKVIILARESGLKLDLADLPIRSLVPEPLKGCTSVEEFMEKLPQYDGDLAKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQLAGSDNIIAFTTTRYKDHPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 916          
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: AKH2_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Zea mays GN=AKHSDH2 PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 5.569e-87
Identity = 154/192 (80.21%), Postives = 180/192 (93.75%), Query Frame = 2
Query:    5 RIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 580
            RIEGIFSGTLSY+FN+F GTR+FS+VV EA+EAGYTEPDPRDDLSGTDVARKV++LARESGL+LELSD+PV+SLVPE L +C+SA+EFM++LP FD++ A+QR +AE AGEVLRYVG +DA+N+ G+VELRRY+RDHPFAQLSGSDNIIAFTT RYKEQPLIVRGPGAGA+VTAGG+F DILRLASYLGAPS
Sbjct:  726 RIEGIFSGTLSYIFNNFEGTRAFSDVVAEAREAGYTEPDPRDDLSGTDVARKVVVLARESGLRLELSDIPVKSLVPETLASCSSADEFMQKLPSFDEDWARQRSDAEAAGEVLRYVGALDAVNRSGQVELRRYRRDHPFAQLSGSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS 917          
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: AKH1_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 5.212e-85
Identity = 153/192 (79.69%), Postives = 178/192 (92.71%), Query Frame = 2
Query:    5 RIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 580
            RIEGIFSGTLSY+FN+F G R+FS+VV EAK+AGYTEPDPRDDLSGTDVARKVIILARESGL LELSD+PV+SLVPE LK+C SA+E+M++LP FD++ A++R+ AE AGEVLRYVGVVD ++K+G+VELR YKRDHPFAQLSGSDNIIAFTT RYK+QPLIVRGPGAGA+VTAGG+F DILRL+SYLGAPS
Sbjct:  729 RIEGIFSGTLSYIFNNFEGARTFSDVVAEAKKAGYTEPDPRDDLSGTDVARKVIILARESGLGLELSDIPVRSLVPEALKSCTSADEYMQKLPSFDEDWARERKNAEAAGEVLRYVGVVDVVSKKGQVELRAYKRDHPFAQLSGSDNIIAFTTSRYKDQPLIVRGPGAGAEVTAGGVFCDILRLSSYLGAPS 920          
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: AKH_DAUCA (Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic (Fragment) OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 7.527e-84
Identity = 152/192 (79.17%), Postives = 177/192 (92.19%), Query Frame = 2
Query:    5 RIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 580
            RIEGIFSGTLSY+FN+F  T  FSEVV+EAK AGYTEPDPRDDL+GTDVARKVIILAR SGLKLELSD+PVQSLVPEPL+  ASAEEF+ QLPQFD ++ ++R++AE+AGEVLRYVGVVDA+N++G VEL+RYK++HPFAQLSGSDNI AFTT+RY +QP I+RGPGAGA+VTAGG+FSDILRLASYLGAPS
Sbjct:  730 RIEGIFSGTLSYIFNNFKSTTPFSEVVSEAKAAGYTEPDPRDDLAGTDVARKVIILARGSGLKLELSDIPVQSLVPEPLRGIASAEEFLLQLPQFDSDMTRKREDAENAGEVLRYVGVVDAVNQKGVVELKRYKKEHPFAQLSGSDNINAFTTERYNKQPPIIRGPGAGAEVTAGGVFSDILRLASYLGAPS 921          
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: DHOM_SCHPO (Probable homoserine dehydrogenase OS=Schizosaccharomyces pombe GN=SPBC776.03 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.621e-55
Identity = 110/196 (56.12%), Postives = 141/196 (71.94%), Query Frame = 2
Query:    5 RIEGIFSGTLSYLFNSFV-----GTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLE-LSDLPVQSLVPEPLKACASAEEFMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGA 574
            +IEGIFSGTLSY+FN +      GT SFS++V  AK+ GYTEPDPRDDL+G DVARKV IL+R +G+ +E  S  PV+SL+PEPLK+  +AEEF+  LP FD E A  R+EAE  G+V+R+VG  D  NK   V+L +Y   HPFA L  SDNII+FTTKRY  +PL+V G GAGA VTA G+  D++++ S + A
Sbjct:  175 KIEGIFSGTLSYIFNVWSPNGKKGTASFSDIVKIAKQNGYTEPDPRDDLNGMDVARKVTILSRIAGVHVESASSFPVKSLIPEPLKSAVNAEEFLAGLPNFDSEFASMREEAEKEGKVVRFVGEADVANKTTLVKLEKYDASHPFANLQSSDNIISFTTKRYHTRPLVVIGAGAGAAVTAAGVLGDMIKIMSQVRA 370          
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: DHOM_YEAST (Homoserine dehydrogenase OS=Saccharomyces cerevisiae GN=HOM6 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.027e-48
Identity = 97/193 (50.26%), Postives = 139/193 (72.02%), Query Frame = 2
Query:    5 RIEGIFSGTLSYLFNSFVGTRS----FSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLEL-SDLPVQSLVPEPLKACASAEEFMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 568
            +IEGIFSGTLSY+FN F  +++    FS+VV  AK+ GYTEPDPRDDL+G DVARKV I+ R SG+++E  +  PVQSL+P+PL++  SA+EF+++L  +DK+L + ++EA    +VLR++G VD   K   V + +Y   HPFA L GSDN+I+  TKRY   P++++G GAGA VTA G+  D++++A  L
Sbjct:  168 KIEGIFSGTLSYIFNEFSTSQANDVKFSDVVKVAKKLGYTEPDPRDDLNGLDVARKVTIVGRISGVEVESPTSFPVQSLIPKPLESVKSADEFLEKLSDYDKDLTQLKKEAATENKVLRFIGKVDVATKSVSVGIEKYDYSHPFASLKGSDNVISIKTKRY-TNPVVIQGAGAGAAVTAAGVLGDVIKIAQRL 359          
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: DHOM_EMENI (Homoserine dehydrogenase OS=Emericella nidulans GN=AN2882 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.096e-48
Identity = 102/198 (51.52%), Postives = 140/198 (70.71%), Query Frame = 2
Query:    5 RIEGIFSGTLSYLFNSFV-----GTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSD-LPVQSLVPEPLKACASAEE----FMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 568
            RIEG+FSGTLS+LFN+F       +  +SEVV++AKE GYTEPDPRDDL+G DVARK+ ILAR +GL ++  D  P++SL+P  L +  S+ +    FM +LP+FD ++A  ++ AE AG+V+RYVG VD   KE RV L+++ +D   A L GSDNII+F T+RY   PLIV+G GAG  VTA G+ +D+L++   L
Sbjct:  171 RIEGVFSGTLSFLFNTFAPASGSSSAKWSEVVSQAKELGYTEPDPRDDLNGMDVARKLTILARIAGLDVQSPDSFPIESLIPAELTSLPSSADGIAQFMARLPEFDSQMAAIKEGAEKAGKVVRYVGSVDVAKKEVRVGLQQFDKDSAIAGLKGSDNIISFYTRRYGSNPLIVQGAGAGGDVTAMGVTADLLKVIERL 368          
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: AK1H_SERMA (Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Serratia marcescens GN=thrA PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.108e-40
Identity = 86/189 (45.50%), Postives = 122/189 (64.55%), Query Frame = 2
Query:    5 RIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRD--HPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASY 565
            R  GI SG+LS++F       S S    +A+  GYTEPDPRDDLSG DVARK++ILARE+G KLELSD+ V+ ++P    A    + F+ +LP+ DKE A+    A + G+VLRYVG++D    EGR ++R    D   P  ++   +N +AF ++ Y+  PL++RG GAG  VTA G+F+D+LR  S+
Sbjct:  631 RFSGILSGSLSFIFGKLDEGLSLSAATLQARANGYTEPDPRDDLSGMDVARKLLILAREAGYKLELSDIEVEPVLPPSFDASGDVDTFLARLPELDKEFARNVANAAEQGKVLRYVGLID----EGRCKVRIEAVDGNDPLYKVKNGENALAFYSRYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSW 815          
BLAST of CK935301 vs. ExPASy Swiss-Prot
Match: AK2H_ECOLI (Bifunctional aspartokinase/homoserine dehydrogenase 2 OS=Escherichia coli (strain K12) GN=metL PE=1 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.486e-39
Identity = 88/187 (47.06%), Postives = 122/187 (65.24%), Query Frame = 2
Query:    8 IEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPQFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 568
            I GIFSGTLS+LF  F G+  F+E+V +A + G TEPDPRDDLSG DV RK++ILARE+G  +E   + V+SLVP   +   S + F +   + ++++ ++ + A + G VLRYV   DA N + RV +   + DHP A L   DN+ A  ++ Y++ PL++RGPGAG  VTAG I SDI RLA  L
Sbjct:  626 ISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAREAGYNIEPDQVRVESLVPAHCEG-GSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVARFDA-NGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDINRLAQLL 810          
The following BLAST results are available for this feature:
BLAST of CK935301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AKH1_ARATH2.185e-9186.98Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH2_ARATH2.953e-8883.33Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH2_MAIZE5.569e-8780.21Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH1_MAIZE5.212e-8579.69Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH_DAUCA7.527e-8479.17Bifunctional aspartokinase/homoserine dehydrogenas... [more]
DHOM_SCHPO5.621e-5556.12Probable homoserine dehydrogenase OS=Schizosacchar... [more]
DHOM_YEAST1.027e-4850.26Homoserine dehydrogenase OS=Saccharomyces cerevisi... [more]
DHOM_EMENI5.096e-4851.52Homoserine dehydrogenase OS=Emericella nidulans GN... [more]
AK1H_SERMA5.108e-4045.50Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AK2H_ECOLI1.486e-3947.06Bifunctional aspartokinase/homoserine dehydrogenas... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_D04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935301 ID=CK935301; Name=CK935301; organism=Citrus sinensis; type=EST; length=824bp
GGGGCGCATTGAAGGCATTTTCAGTGGGACTTTGAGTTATCTTTTTAACA
GCTTTGTAGGCACAAGATCATTCAGTGAGGTAGTGACAGAGGCGAAAGAA
GCAGGTTATACTGAACCTGATCCAAGGGATGATCTATCTGGAACAGATGT
TGCCAGAAAGGTGATAATCCTTGCCCGAGAATCCGGTCTTAAGCTGGAAC
TTTCTGATCTCCCTGTTCAAAGTCTTGTGCCAGAACCATTAAAAGCTTGT
GCATCTGCTGAAGAGTTTATGAAGCAATTACCACAATTTGACAAAGAATT
GGCCAAGCAAAGACAAGAGGCCGAGGATGCAGGGGAAGTCCTTAGATATG
TGGGAGTGGTGGATGCTATCAACAAAGAGGGGCGTGTAGAGTTGCGAAGA
TACAAGAGAGATCATCCATTCGCACAGCTCTCTGGTTCCGATAACATCAT
AGCTTTCACAACAAAACGATACAAGGAGCAGCCACTTATCGTCCGTGGAC
CTGGTGCCGGAGCTCAAGTCACAGCAGGTGGAATCTTCAGCGATATATTG
CGGCTGGCCTCATATCTTGGTGCCCCATCATAGTGTATCAATTTCTATGC
CTTTCAGTCTGGTTTTAGCCTTCTCTTTTTGGTTATTTGAGGCAGTAGCA
TTGGTAGTTTTATCTGCTGGATGATGATAGTGTTTTGAGTTAGTAATTAC
GTATCTTAGTCGTCTTGGAACTTTCGAACTTTCAAAATAAAGTTTATCTA
GTGGCTTGAAAGCATAAATAAGTCTATATTTAGTTCGGCCTTTGTAGTTT
TCTTTCTTTAAACTTTATATTTTT
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