CK935306

Overview
NameCK935306
Unique NameCK935306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1794 contig Csv1_Contig1794:1..753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK935306 vs. ExPASy Swiss-Prot
Match: FIP37_ARATH (FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana GN=FIP37 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.230e-51
Identity = 109/178 (61.24%), Postives = 122/178 (68.54%), Query Frame = 3 
Query:  219 APGVATGMILSLRESLQNCKDTLATCQLELEAAKLEIQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSXXXXXXXXXXXXXXXXXFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEFRRXXXXXXXXXXXXXXXXXXIAAVSFTANSKMGKALMGKCKTLQ 752
            APGV TGMILSLR SL+NCKD LA+CQ ELE+AK EIQKW S+FQNE F+P G SPEPR +I+Y+Q LKSS                  IV +AKREQE+AELKSAVRDLK+QLKP  MQARRLLLDPAIHEEF R                  IAAV+FT  SK GK LM KC+TLQ
Sbjct:   46 APGVRTGMILSLRGSLKNCKDDLASCQNELESAKTEIQKWKSAFQNESFVPAGKSPEPRFLIDYIQNLKSSEKSLKEQLEIAKRKEASCIVQYAKREQEMAELKSAVRDLKSQLKPASMQARRLLLDPAIHEEFSRLKNLVEEKDKKIKELQDNIAAVTFTPQSKNGKMLMAKCRTLQ 223
The following BLAST results are available for this feature:
BLAST of CK935306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FIP37_ARATH4.230e-5161.24FKBP12-interacting protein of 37 kDa OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004563_B11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935306 ID=CK935306; Name=CK935306; organism=Citrus sinensis; type=EST; length=753bp
GGGGATCGCTAAAATACGCCAAAATTAATTAAATTCTAGGGTTTTCAGTT
TCCATGGCTTCACGGACTCATCTCGACGATGACGACGATTTTGGCGGCGA
TTTTTCTGCTAATCATAATTCTAGACGTTCTGGCTCGAAGAGAAGCTTCG
GTGATATTGAAGATGACGAGGACGATATTTTTGGTTCAAGAAAGGCTAAT
TCAAAAGTGGAAGAAACTGCTCCTGGAGTTGCAACTGGGATGATTTTGTC
TCTGCGTGAGAGTCTTCAGAACTGTAAGGACACACTTGCAACATGCCAAT
TGGAACTTGAAGCTGCGAAGTTGGAGATTCAGAAGTGGCATTCTTCGTTC
CAAAATGAGCTCTTCATACCTCCTGGGACATCTCCTGAACCTAGATTAGT
CATCAATTATCTTCAGACCCTAAAATCCTCCGAGGAGATGCTGAAGGAAC
AGTTAGAAAAAGCAAAGAAAAAGGAAGCTGCATTCATTGTAACATTTGCA
AAACGGGAACAGGAGATAGCGGAGTTGAAGTCTGCGGTTCGAGATTTGAA
GGCTCAGCTTAAGCCACCATTGATGCAGGCAAGGAGGTTACTGCTAGATC
CGGCAATTCATGAAGAATTTAGACGTTTGAAGAATTTGGTTGAGGAGAAG
GACAAAAAAGTGAAGGAGCTGGAGGAAGATATAGCTGCTGTTTCTTTTAC
TGCAAACAGCAAGATGGGGAAAGCACTGATGGGCAAGTGTAAGACTTTGC
AAG
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