CK935315

Overview
NameCK935315
Unique NameCK935315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935315_ssr151 microsatellite CK935315_ssr151:151..160. BLAST: Citrus ESTs to Prunus persica proteins V1
CK935315_ssr97 microsatellite CK935315_ssr97:97..108. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1796 contig Csv1_Contig1796:1..792. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APXS_ARATH (L-ascorbate peroxidase S, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=APXS PE=1 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 1.903e-89
Identity = 157/193 (81.35%), Postives = 176/193 (91.19%), Query Frame = 3
Query:  210 RRSSVNRGY-STVPTTKCAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            R +SVNR + ST   TK ++SDPDQLK+AREDI+ELL + FCHPILVRLGWHDAGTY+KNI+EWP+RGGAN SLRF++ELKHAANAGLVNAL LI+ IK+KYSG++YADLFQLASATAIEEAGGPKIPMKYGRVD SGPE CPEEGRLP AGPPSPA HLR VFYRMGL+DK+IVALSGAHT+GRSRPERSGW
Sbjct:   82 RIASVNRSFNSTTAATKSSSSDPDQLKNAREDIKELLSTKFCHPILVRLGWHDAGTYNKNIKEWPQRGGANGSLRFDIELKHAANAGLVNALNLIKDIKEKYSGISYADLFQLASATAIEEAGGPKIPMKYGRVDASGPEDCPEEGRLPDAGPPSPATHLREVFYRMGLDDKDIVALSGAHTLGRSRPERSGW 274          
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APXT_ARATH (L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 9.776e-86
Identity = 150/195 (76.92%), Postives = 172/195 (88.21%), Query Frame = 3
Query:  201 ISQRRSSVNRGYSTVPTTKCAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            + Q++  +N   + + + KCAASD  QL SA+EDI+ LL++ FCHPILVRLGWHDAGTY+KNIEEWP RGGAN SLRFE ELKHAANAGL+NALKLIQP+KDKY  ++YADLFQLASATAIEEAGGP IPMKYGRVDV  PEQCPEEGRLP AGPPSPA+HLR+VFYRMGL+DKEIVALSGAHT+GR+RP+RSGW
Sbjct:   59 VLQKKHPINGTSTRMISPKCAASDAAQLISAKEDIKVLLRTKFCHPILVRLGWHDAGTYNKNIEEWPLRGGANGSLRFEAELKHAANAGLLNALKLIQPLKDKYPNISYADLFQLASATAIEEAGGPDIPMKYGRVDVVAPEQCPEEGRLPDAGPPSPADHLRDVFYRMGLDDKEIVALSGAHTLGRARPDRSGW 253          
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 4.852e-85
Identity = 152/183 (83.06%), Postives = 166/183 (90.71%), Query Frame = 3
Query:  246 PTTKCAASDPD---QLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            P +  AA+  D   +L+ ARED+++LLKST CHPILVRLGWHDAGTYDKNI EWP+ GGAN SLRFE+ELKHAANAGLVNALKLIQPIKDK++GVTYADLFQLASATAIEEAGGPKIPM YGRVDV+ PEQCP EGRLPAAGPPSPAEHLR VFYRMGL+DKEIVALSGAHT+GRSRPERSGW
Sbjct:   28 PASSSAAAAGDAAAELRGAREDVKQLLKSTSCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFEIELKHAANAGLVNALKLIQPIKDKHAGVTYADLFQLASATAIEEAGGPKIPMIYGRVDVAAPEQCPPEGRLPAAGPPSPAEHLREVFYRMGLSDKEIVALSGAHTLGRSRPERSGW 210          
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 310.457 bits (794), Expect = 7.006e-84
Identity = 146/175 (83.43%), Postives = 161/175 (92.00%), Query Frame = 3
Query:  261 AASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            AASD  QLKSAREDIRE+LK+T+CHPI+VRLGWHD+GTYDKNIEEWP+RGGA+ SLRF+ EL H ANAGL+NALKLIQPIKDKY G+TYADLFQLASATAIEEAGGPKIPMKYGRVDV+  EQCP EGRLP AGP  PA+HLR VFYRMGL+DKEIVALSGAHT+GRSRP+RSGW
Sbjct:   84 AASDAAQLKSAREDIREILKTTYCHPIMVRLGWHDSGTYDKNIEEWPQRGGADGSLRFDAELSHGANAGLINALKLIQPIKDKYPGITYADLFQLASATAIEEAGGPKIPMKYGRVDVTAAEQCPPEGRLPDAGPRVPADHLREVFYRMGLDDKEIVALSGAHTLGRSRPDRSGW 258          
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 7.746e-83
Identity = 144/183 (78.69%), Postives = 162/183 (88.52%), Query Frame = 3
Query:  237 STVPTTKCAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            S    +   AS   +LK+AREDIRELLK+T CHPILVRLGWHD+GTYDKNI+EWP+RGGAN SLRF+VELKH ANAGLVNALKL+QPIKDKY  ++YADLFQLASATAIEEAGGPKIPM YGR+DV+GPEQCP EG+LP AGP +PA+HLR VFYRMGL+DKEIV LSGAHT+GRSRPERSGW
Sbjct:   77 SASAASAAVASGAAELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGW 259          
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APX5_ORYSJ (Probable L-ascorbate peroxidase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=APX5 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.152e-76
Identity = 140/187 (74.87%), Postives = 158/187 (84.49%), Query Frame = 3
Query:  228 RGYSTVPTTKCAASDPD-QLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            R  S+  +   AA D + +L++ARED+R+LLKS  CHPILVRLGWHDAGTYDKNI EWP+ GGAN SLRF VEL HAAN GL+ AL L+ PIK KY+GVTYAD+FQLASATAIEEAGGPKIPM YGR DV+  E+CP EGRLPAA PPSPAEHLR VFYRMGL+DKEIVALSGAHT+GR+RPERSGW
Sbjct:   35 RPASSSSSAAAAAGDVEAELRAAREDVRQLLKSNPCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFGVELVHAANKGLLKALFLVIPIKSKYAGVTYADIFQLASATAIEEAGGPKIPMIYGRADVADGEECPPEGRLPAADPPSPAEHLREVFYRMGLSDKEIVALSGAHTLGRARPERSGW 221          
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.693e-43
Identity = 92/169 (54.44%), Postives = 116/169 (68.64%), Query Frame = 3
Query:  279 QLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            +++ AR D+R L+ S  C PI++RL WHDAGTYDK      + GG N S+RF  E  HAANAG+  A+ L++P+K K+  +TYADL+QLA   A+E  GGP I    GR D S     PEEGRLP A     A HLR VFYRMGL+DK+IVALSG HT+G++RPERSG+
Sbjct:   14 EVERARRDLRALIASKSCAPIMLRLAWHDAGTYDKAT----KTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQKHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSS---DSPEEGRLPDA--KKGAAHLREVFYRMGLSDKDIVALSGGHTLGKARPERSGF 173          
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.000e-43
Identity = 91/169 (53.85%), Postives = 116/169 (68.64%), Query Frame = 3
Query:  279 QLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            +++ AR D+R L+ S  C PI++RL WHDAGTYDK      + GG N S+RF  E  HAANAG+  A+ L++P+K ++  +TYADL+QLA   A+E  GGP I    GR D S     PEEGRLP A     A HLR VFYRMGL+DK+IVALSG HT+G++RPERSG+
Sbjct:   14 EVERARRDLRALIASKSCAPIMLRLAWHDAGTYDKAT----KTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQRHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSS---DSPEEGRLPDA--KKGAAHLREVFYRMGLSDKDIVALSGGHTLGKARPERSGF 173          
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.280e-42
Identity = 91/169 (53.85%), Postives = 114/169 (67.46%), Query Frame = 3
Query:  279 QLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            Q+  AR  +R L+ S  C PI++RL WHDAGTYD N     + GGAN S+R+E E  H +NAGL  A+ L++PIK K   +TYADL+QLA   A+E  GGP +    GR D S    CP EGRLP A     A HLR++FYRMGL+DK+IVALSG HT+GR+ PERSG+
Sbjct:   13 QVDRARRHLRALISSKGCAPIMLRLAWHDAGTYDVNT----KTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVAVEVTGGPTVEFIPGRRDSS---VCPREGRLPDA--KKGALHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGF 172          
BLAST of CK935315 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.359e-39
Identity = 86/169 (50.89%), Postives = 111/169 (65.68%), Query Frame = 3
Query:  279 QLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGW 785
            ++  AR ++R L+ +  C PI++RL WHDAGTYD       + GG N S+R E E  H AN+GL  AL L + +K K+  +TYADL+QLA   A+E  GGP I    GR D      CP+EGRLP A      +HLR+VFYRMGL+DK+IVALSG HT+GR+ PERSG+
Sbjct:   13 EITKARRELRSLIANKNCAPIMLRLAWHDAGTYDAQ----SKTGGPNGSIRNEEEHTHGANSGLKIALDLCEGVKAKHPKITYADLYQLAGVVAVEVTGGPDIVFVPGRKD---SNVCPKEGRLPDA--KQGFQHLRDVFYRMGLSDKDIVALSGGHTLGRAHPERSGF 172          
The following BLAST results are available for this feature:
BLAST of CK935315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
APXS_ARATH1.903e-8981.35L-ascorbate peroxidase S, chloroplastic/mitochondr... [more]
APXT_ARATH9.776e-8676.92L-ascorbate peroxidase T, chloroplastic OS=Arabido... [more]
APX6_ORYSJ4.852e-8583.06Probable L-ascorbate peroxidase 6, chloroplastic O... [more]
APX8_ORYSJ7.006e-8483.43Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
APX7_ORYSJ7.746e-8378.69Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
APX5_ORYSJ3.152e-7674.87Probable L-ascorbate peroxidase 5, chloroplastic O... [more]
APX3_ORYSJ2.693e-4354.44Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI6.000e-4353.85Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX4_ORYSJ2.280e-4253.85Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ARATH2.359e-3950.89L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_A09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935315 ID=CK935315; Name=CK935315; organism=Citrus sinensis; type=EST; length=792bp
GGGGACAACAACAGATACGACTGCAATCAAAATCACAATCACCGATGGCT
TCCTCTTTGAGCACCGCCGCTTCTTCTCGCCTTCTTTGCTCCACCACCGC
CGCCGCCGCAGCTGCTAAGCTTTCTTTCTCTTCCGCTTCTTCACTCTCTT
TCTCTCTCTCCTCTTCTTCCTCCCTCAAATGCCTCAGATTCTCTCCTCTC
ATCAGCCAGAGGAGATCGTCTGTGAACAGAGGATATAGCACCGTACCTAC
GACGAAATGTGCGGCGTCGGATCCTGATCAGTTGAAGAGTGCTAGAGAAG
ATATTAGGGAGCTTCTCAAGTCTACATTTTGCCATCCTATTTTGGTTCGT
CTAGGATGGCATGATGCTGGTACTTATGACAAGAACATTGAGGAGTGGCC
TCGAAGGGGAGGAGCTAATGCAAGTCTTAGATTTGAGGTTGAGCTAAAAC
ACGCAGCCAATGCTGGGCTTGTGAATGCATTGAAACTGATTCAACCTATC
AAGGACAAATATTCCGGTGTCACATATGCAGACTTATTCCAGTTGGCTAG
CGCTACTGCTATAGAGGAAGCCGGGGGTCCTAAGATCCCAATGAAGTATG
GAAGAGTGGATGTCTCAGGACCTGAGCAGTGCCCTGAAGAAGGAAGGCTT
CCTGCTGCTGGGCCTCCATCACCTGCTGAACATTTAAGAAATGTCTTTTA
TAGAATGGGATTAAATGACAAGGAAATAGTTGCCTTATCTGGTGCACACA
CAGTGGGAAGGTCTAGACCTGAACGAAGTGGTTGGGNNNNNC
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