CK935320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 350.517 bits (898), Expect = 4.704e-96 Identity = 172/224 (76.79%), Postives = 195/224 (87.05%), Query Frame = 2 Query: 5 GLNQS-SNDDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGHPPNAEARVTKCRSTRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQTEFHHSGLDSFPSIPFFRSKSIRAENFQND-----QKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASLENGVAGQDHE 658 GLNQ+ SNDDGKFLLAA++ RRPTCTDYIISLNCDDVS+GS+TYIG+LRSNFLGTKFT+YD P N +VT+ RS+R +++KQVSP++ +GNY VAHISYELNVLGSRGPRRMQCVMDAIPAS++EPGG APTQTE HS LDSFPS FFRSKSIRAE+ + QKEGLLVL+NKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVA+ ENG AG +HE Sbjct: 141 GLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRSKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGPAGPEHE 364
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 3.379e-86 Identity = 155/222 (69.82%), Postives = 182/222 (81.98%), Query Frame = 2 Query: 5 GLNQSSNDDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGHPPNAEARVTKCRSTRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQTEFHHSGLDSFPSIPFFRSKSIRAENFQND---QKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASLENGVAGQDHEK 661 GL ++ DDGKFLLAARKCR+PTCTDY+ISL+ D+SKGS+TYIG+LRSNFLGTKFT+YD HPP A V+K RS R V + QVSP++ AGNY V+HISYELNVLG+RGPRRM C+MD+IP S+++ GG APTQTEF SGLDSFPSI FFRSKS R ++ + QKE LVL+NK+PRWHEQLQCWCLNF GRVTVASVKNFQLVAS ENG Q+ +K Sbjct: 141 GLTEALADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGAVVSKSRSARVVGLNQVSPRVPAGNYPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSKSARIDSATSQLSTQKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDENGPTNQEQDK 362
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 4.423e-78 Identity = 142/221 (64.25%), Postives = 171/221 (77.38%), Query Frame = 2 Query: 5 GLNQSSNDDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGHPPNAEARVTKCRSTRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQTEFHHSGLDSFPSIPFFRSKSIRAENFQND---QKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASLENGVAGQDHE 658 GL + DDGKFLLAARKCRR TCT+Y+ISL+ +D+SK + +Y+G+LRSNFLGTKFTIYD HPP A ++K +S R + +SP++ AGNY V+HISYELNVLGSRGPRRM C MD+IP S+IE GG APTQTEF S +SF SIPFF+SKS+RA N Q LVL+NK+PRWHE LQCWCLNF+GRVTVASVKNFQLVAS E+ Q+H+ Sbjct: 144 GLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAGNYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFFKSKSVRANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVASDESNPTNQEHD 364
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.266e-60 Identity = 123/235 (52.34%), Postives = 158/235 (67.23%), Query Frame = 2 Query: 26 DDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGHPPNAEARVTKC-RSTRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQTE--FHHSGLDSFPSIPFFRSKSI--RAENF-----------------------QNDQKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASLENGVAG 646 D GKFLL+A++ R+ TCT+Y+IS++ D++S+ SSTYIG+LRSNFLGTKF IYD P A + RS+R+ N K+VSPK+ +G+Y++A ++YELNVLG+RGPRRM CVM +IPASS+EPGG+ P Q E + +SF S F SI R+ +F + KE LVLRNKAPRWHEQLQCWCLNF GRVT+ASVKNFQL+A+ AG Sbjct: 156 DSGKFLLSAKRHRKTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIAAPAQPPAG 390
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP11_ARATH (Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.210e-59 Identity = 123/208 (59.13%), Postives = 149/208 (71.63%), Query Frame = 2 Query: 5 GLNQSSNDDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGH-PPNAEARVTKCRSTRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQTEFHHSGLDSFPSIPFFRSKSIRAENFQNDQKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAS 625 GL S DDGKFLLAA K + TCTDYIISL DD+S+ S Y+G++RSNFLGTKFT++DG+ P+ A K R +R N +VS K+ G+Y VAHI+YELNVLGSRGPR+MQC+MD IP S++EP GVA +EF G S S RS+S + + KE LVL NK PRWHEQL+CWCLNF+GRVTVASVKNFQLVA+ Sbjct: 129 GLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFLGTKFTVFDGNLLPSTGA--AKLRKSRSYNPAKVSAKVPLGSYPVAHITYELNVLGSRGPRKMQCLMDTIPTSTMEPQGVASEPSEFPLLGTRSTLS----RSQSKPLRSSSSHLKETPLVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVAA 330
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP9_ARATH (Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.006e-59 Identity = 125/228 (54.82%), Postives = 158/228 (69.30%), Query Frame = 2 Query: 5 GLNQSSNDDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGHPPNAEARVTKCRSTRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQTEFHHSGLDSFP--SIPFFR--SKSIRAENFQ-----NDQKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASLENGVAGQDHEK 661 GL S D+GKFLLAA K +R TCTDYIISL DD+SK S+ Y+GR+RSNFLGTKFT++DG ++ K + +R N +VSP++ G+Y +AHISYELNVLGSRGPRRM+C+MD IP S +E GV + + + SF S P FR SK +R+ + N+ + LVL NKAPRWHEQL+CWCLNF+GRVTVASVKNFQLVA + + AGQ E+ Sbjct: 123 GLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNFLGTKFTVFDG----SQTGAAKMQKSRSSNFIKVSPRVPQGSYPIAHISYELNVLGSRGPRRMRCIMDTIPMSIVESRGVVAS------TSISSFSSRSSPVFRSHSKPLRSNSASCSDSGNNLGDPPLVLSNKAPRWHEQLRCWCLNFHGRVTVASVKNFQLVA-VSDCEAGQTSER 339
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.362e-55 Identity = 118/240 (49.17%), Postives = 154/240 (64.17%), Query Frame = 2 Query: 23 NDDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGHPP-NAEARVTKCRSTRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQ-----------------TEF------HHSGLDSFPSIPFFRSKSIRAENFQND----QKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASLENGVAGQDHE 658 ++ GKFLL+A++ RR T TDYIIS++ ++S+ SS YIG+LRSNFLGTKF IYD PP NA ++ R++R+ + ++VSPK+ G Y + ++YELNVLG+RGPRRMQC M +IPAS++EPGG+ P Q T F HS S F +++ + + D KE LVLRNKAPRWHEQLQCWCLNF GRVTVASVKNFQL+A+ +G E Sbjct: 152 DETGKFLLSAKRSRRTTHTDYIISMDSKNISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTLCSQERTSRRFSSRKVSPKVPTGCYPIVQVNYELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMATSFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAPQPSSGAASE 391
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.362e-55 Identity = 112/225 (49.78%), Postives = 152/225 (67.56%), Query Frame = 2 Query: 23 NDDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGHPPNAEARVTKCR-STRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQTE------FHHSGLDSFPSIPF-FRSKSI----------------RAENFQNDQKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAS 625 +++GKFLLAA++ RR T T+YIIS++ ++S+ S+ Y+G++RSNFLGTKF +YD PP + C+ +R+++ ++VSPKL G+Y +AH+ YELNVLG+RGPRRMQC M +IPAS+++P GV P Q E F S + S F F +S+ + E+ + KE LVLRNK PRWHEQLQCWCLNF GRVTVASVKNFQL+A+ Sbjct: 155 SENGKFLLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRISSRRVSPKLPTGSYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTNTSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAA 379
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.084e-55 Identity = 110/226 (48.67%), Postives = 151/226 (66.81%), Query Frame = 2 Query: 26 DDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGHPP---NAEARVTKCRSTRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQTE-----------------------FHHSGLDSFPSIPFFRSKSIRAENFQNDQKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAS 625 ++GKFLL+A++ RR T T+YIIS++ D++S+ S++Y+G+LRSNFLGTKF +YD PP ++ A +T S + + ++VSPK+ +G+Y++A I+YELNVLG+RGPRRM C+M++IP SS+EPGG P Q E F H LD S F I ++ + + L+L+NK PRWHEQLQCWCLNF GRVTVASVKNFQLVA+ Sbjct: 156 ENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRSLDF--SSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAA 379
BLAST of CK935320 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.410e-54 Identity = 115/228 (50.44%), Postives = 151/228 (66.23%), Query Frame = 2 Query: 26 DDGKFLLAARKCRRPTCTDYIISLNCDDVSKGSSTYIGRLRSNFLGTKFTIYDGHPPNAEARVTKC-RSTRQVNMKQVSPKLLAGNYHVAHISYELNVLGSRGPRRMQCVMDAIPASSIEPGGVAPTQTE--FHHSGLDSFPSIPFFRS----KSIRAENFQ-------------------NDQKEGLLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASLE 631 + GKFLL+A++ R TCT+Y I ++ D+ S+ S+ YIG+LRSN LGTKF IYD PP A V++ +++R+ ++VSPK + Y +A +SYELNVLG+RGPRRM CVM +IPASS+E GG P Q + S +SF SI F +S +SIR + + ++ KE L+LRNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVA+ + Sbjct: 156 ESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKNPSSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDESFGSISFSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAATQ 383 The following BLAST results are available for this feature:
BLAST of CK935320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935320 ID=CK935320; Name=CK935320; organism=Citrus sinensis; type=EST; length=680bpback to top |