CK935345

Overview
NameCK935345
Unique NameCK935345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK935345 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.673e-13
Identity = 35/66 (53.03%), Postives = 41/66 (62.12%), Query Frame = 1 
Query:  202 CNGKSSWPELVGVNGEIAAATIQEENPNVHAIIILEGTPVTQDFRCXXXXXXXXXXXXXXXXPRIG 399
            C GKSSWP LVGV G +A A I+ +NPNV A+I+ EGTPVT+DFRC                PRIG
Sbjct:    3 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 68
[Close]
BLAST of CK935345 vs. ExPASy Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 28/46 (60.87%), Postives = 39/46 (84.78%), Query Frame = 1 
Query:  202 CNGKSSWPELVGVNGEIAAATIQEENPNVHAIIILEGTPVTQDFRC 339
            C GK++WPELVG +G +AAAT++ EN NVHAI++ EG+ +T+DFRC
Sbjct:    4 CPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRC 49
The following BLAST results are available for this feature:
BLAST of CK935345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ITH5_CUCMA4.673e-1353.03Inhibitor of trypsin and hageman factor OS=Cucurbi... [more]
ICI_LINUS2.564e-1160.87Proteinase inhibitor OS=Linum usitatissimum PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004562_G07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935345 ID=CK935345; Name=CK935345; organism=Citrus sinensis; type=EST; length=657bp
GGGGGTCTAACAGCCTTCAAAATAATTGAAAATTAATCAACAATGAAGAA
CACAGTACTAGCACTAGCTTTCTTCGTCTTTCTCTTTGCCTTTGCTGCAA
AACCATCTTTGGCTGCTCGTCATGAGCCGTTAGTGCTTCATTCGGATGGC
CAGGAGCTCCTCATGGCTACCAGCAATTGCGATATCGTAACTCAATTTGA
GTGTAATGGCAAGAGCTCATGGCCAGAACTGGTTGGTGTAAACGGGGAGA
TTGCTGCTGCTACGATACAGGAAGAGAATCCTAATGTTCATGCAATCATA
ATACTTGAGGGAACTCCAGTTACACAAGATTTTCGTTGTGATCGGGTTCG
AGTTGTGGTTGACAAATATGAGAAGGTGGTTCAAGTTCCTCGGATTGGCT
GAACTTCGACGATTATCTGCAATCATCATGGCTGGATGGATGGTCAGGAT
TAACTGCTTGTTTATAATCACTTAACTATGTATTAGTAAAATAAATGAAC
AAGTAGTGTTGTTTAATAAAGCATGCATGGATGTGCGTGATATCCAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAATTATCGAGCGCGAAAAAAAAAAAAAAAAAA
AAAAAAA
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