CK935370

Overview
NameCK935370
Unique NameCK935370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK935370 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.765e-12
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 1 
Query:  202 CNGKSSWSELVGVNGEIAAATIQKENPNVHAIIILEGTPVTQDFRCXXXXXXXXXXXXXXXXPRIG 399
            C GKSSW  LVGV G +A A I+++NPNV A+I+ EGTPVT+DFRC                PRIG
Sbjct:    3 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 68
[Close]
BLAST of CK935370 vs. ExPASy Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.685e-11
Identity = 27/46 (58.70%), Postives = 39/46 (84.78%), Query Frame = 1 
Query:  202 CNGKSSWSELVGVNGEIAAATIQKENPNVHAIIILEGTPVTQDFRC 339
            C GK++W ELVG +G +AAAT+++EN NVHAI++ EG+ +T+DFRC
Sbjct:    4 CPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRC 49
The following BLAST results are available for this feature:
BLAST of CK935370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ITH5_CUCMA1.765e-1251.52Inhibitor of trypsin and hageman factor OS=Cucurbi... [more]
ICI_LINUS9.685e-1158.70Proteinase inhibitor OS=Linum usitatissimum PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004562_D10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935370 ID=CK935370; Name=CK935370; organism=Citrus sinensis; type=EST; length=575bp
GGGGGTCTAACAGCCTTCAAAATAATTGAAAATTAATCAACAATGAAGAA
CACAGTACTAGCACTAGCTTTCTTCGTCTTTCTCTTTGCCTTTGCTGCAA
AACCATCTTTGGCTGCTCGTCATGAGCCGTTAGTGCTTCATTCGGATGGC
CAGGAGCTCCTCATGGCTACCAGCAATTGCGATATCGTAACTCAATTTGA
GTGTAATGGCAAGAGCTCATGGTCAGAACTGGTTGGTGTAAACGGGGAGA
TTGCTGCTGCTACGATACAGAAAGAGAATCCTAATGTTCATGCAATCATA
ATACTTGAGGGAACTCCAGTTACACAAGATTTTCGTTGTGATCGGGTTCG
AGTTGTGGTTGACAAATATGAGAAGGTGGTTCAAGTTCCTCGGATTGGCT
GAACTTCGACGATTATCTGCAATCATCATGGCTGGATGGATGGTCAGGAT
TAACTGCTTGTTATAATCACTTAACTATGTATTAGTAAAATAAATGAACA
AGTAGTGTTGTTTAATAAAGCATGCATGGATGTGCGTGATATCCGGAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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