CK935374

Overview
NameCK935374
Unique NameCK935374
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935374 vs. ExPASy Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.383e-36
Identity = 75/143 (52.45%), Postives = 97/143 (67.83%), Query Frame = 2
Query:  140 DCSTLVLNMADCLSFVQAGSTVTKPQGSCCSALKTVLKADAECLCEAFRSSASLGVTLNVTKAQTLPSLCKVSAPSATNCALSLSPAGAPTIGSGLXXXXXXXXXXXXXXNEQAPAPAPGISGSSMTFNSLGSLFIGLVLAIF 568
            DCSTL+LNMADCLSFV +G TV KP+G+CCS LKTVLKAD++CLCEAF+SSASLGVTLN+TKA TLP+ CK+ APS   C LS++P+ AP +  G+                 AP P+ G  GSS+   S  ++   ++  +F
Sbjct:   42 DCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPETAGFL------APNPSSGNDGSSLIPTSFTTVLSAVLFVLF 178          
BLAST of CK935374 vs. ExPASy Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.798e-29
Identity = 70/153 (45.75%), Postives = 98/153 (64.05%), Query Frame = 2
Query:  140 DCSTLVLNMADCLSFVQAGSTVTKPQGSCCSALKTVLKADAECLCEAFRSSASLGVTLNVTKAQTLPSLCKVSAPSATNCALSLS-------PAGAPTIGSGLXXXXXXXXXXXXXXNEQAPAPAPGISGSSMTFNSLGSLFIGLVLAIFSGF 577
            DCS+L+LNMADCLSFV +GSTV KP+G+CCS LKTV++   ECLCEAF++S SLG+TL+++KA +LPS+CKV+AP +  C LS+S       P  +PT G+G               N   P  +P  S +S+   S+   F+ + +A+ S F
Sbjct:   26 DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTAGAG-------APALSSGANAATPVSSPRSSDASLL--SVSFAFV-IFMALISSF 168          
BLAST of CK935374 vs. ExPASy Swiss-Prot
Match: XYP11_ARATH (Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 2
Query:  140 DCSTLVLNMADCLSFVQAGSTVTKPQGSCCSALKTVLKADAECLCEAFRSSAS--LGVTLNVTKAQTLPSLCKVSAPSATNCAL----SLSPAGAPTIGSG 424
            +C   +LN++DC S+VQ GS   KP+ +CC  L  ++++  EC+C  +   AS   GV L+  +A+ L ++C V APS + C++    ++SPAG+    SG
Sbjct:   39 NCLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFPTISPAGSEDSSSG 139          
The following BLAST results are available for this feature:
BLAST of CK935374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
NLTL5_ARATH3.383e-3652.45Non-specific lipid-transfer protein-like protein A... [more]
NLTL2_ARATH1.798e-2945.75Non-specific lipid-transfer protein-like protein A... [more]
XYP11_ARATH3.081e-1336.63Xylogen-like protein 11 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004562_E03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935374 ID=CK935374; Name=CK935374; organism=Citrus sinensis; type=EST; length=819bp
GGGGATCTCAATTCTTGCTTCAAATCAAATGGCATCAAAAGCAAACCTCG
TTTTTCTGTTGGTTCTCTCAATCTACGCCACCAATCATGGCGACTGTGCT
CACCACCACGCGGCTGTCCCATCACCGGCGGCGTCCGTTGACTGTTCGAC
TTTGGTGTTGAACATGGCTGACTGTCTCTCGTTTGTGCAAGCCGGAAGCA
CAGTGACAAAGCCACAAGGATCTTGCTGTTCCGCACTCAAGACAGTGTTG
AAGGCTGACGCTGAGTGTCTATGCGAGGCTTTTAGGAGCAGTGCTTCTCT
TGGTGTCACTTTGAATGTCACAAAAGCCCAAACGCTCCCTTCGCTTTGCA
AAGTCTCTGCGCCTTCTGCTACCAACTGTGCTTTGTCTCTTTCTCCTGCT
GGTGCCCCAACTATTGGTAGTGGCTTGTCTCCGACTGCTGCCGCTGCACC
GACTGATAGTGTTGCAGCAAATGAGCAGGCTCCGGCACCGGCTCCAGGGA
TATCGGGTTCTTCAATGACCTTCAATTCACTTGGATCTTTGTTTATTGGC
CTCGTCCTTGCTATCTTCTCTGGTTTTTAATGCGAGTCTAATTCAGTTTC
TACTGTTTTATTTTGGTTTCTTAATAGTAGATCAAGTTTCTTTTGTTAGT
CACTTGTTTTGATTTCGTATTGTATTTAATGACTGTTGGATACTTGGATT
ATTTCAATTTTTAGTTTAGATGGATTCTCGCTGTGACATTCACACAACTT
GTTATGAAAAGATTAAAGCAAGCACTTCTATCGCGATAATAGAGAGAGTT
TTAAGGGGTAAAAAAAAAC
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