CK935389

Overview
NameCK935389
Unique NameCK935389
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935389_ssr357 microsatellite CK935389_ssr357:357..368. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10554 contig Csv1_Contig10554:1..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935389 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.253e-30
Identity = 65/175 (37.14%), Postives = 103/175 (58.86%), Query Frame = 2
Query:  113 ELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSTLFRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDC 637
            E+F+    + + ++  + +MSLK AV + I +IIH+HG+PI+LS LVS L++  +K   + R MR L H G F        KEEE+Y LT  S LL++    CL+P+V  +LDP      H + KW    D++++    G  +WD++++NP  +  FN AM SDS++    ++DC
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIIT----KEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDC 182          
BLAST of CK935389 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.637e-30
Identity = 65/175 (37.14%), Postives = 103/175 (58.86%), Query Frame = 2
Query:  113 ELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSTLFRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDC 637
            E+F+    + + ++  + +MSLK AVE+ I +II +HG+PI+LS LVS L++  +K   + R MR L H G F        KEEE+Y LT  S LL++    CL+P+V  +LDP      H + KW    D++++    G  +WD++++NP  +  FN AM SDS++    ++DC
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIIT----KEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDC 182          
BLAST of CK935389 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.637e-30
Identity = 65/175 (37.14%), Postives = 103/175 (58.86%), Query Frame = 2
Query:  113 ELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSTLFRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDC 637
            E+F+    + + ++  + +MSLK AVE+ I +II +HG+PI+LS LVS L++  +K   + R MR L H G F        KEEE+Y LT  S LL++    CL+P+V  +LDP      H + KW    D++++    G  +WD++++NP  +  FN AM SDS++    ++DC
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIIT----KEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDC 182          
BLAST of CK935389 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 59/177 (33.33%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  101 ISVRELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSTLFRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISKWFK-GNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIV 628
            +S  +L +    V   ++   ++MSLK A++LGI DI+H H  P+TLS+L+ A+ I   K+ +  R MR LV+   F   +     +E  Y LT  S LL+K     ++PLV  +LDP    P H++S+WFK  N  + +E  +G  +W+ +   P + + F++AM  DS +   ++
Sbjct:   10 LSTEQLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSFQRLMRALVNSNFF--IEENSNNQEVCYWLTPASRLLLKGAPLTVAPLVQVVLDPTFTNPWHYMSEWFKHENHATQFEAANGCTFWEKLANKPSMGRFFDEAMSCDSRLVAHVL 184          
BLAST of CK935389 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23
Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 2
Query:  149 VFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSTLFRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAI-FIVKDC 637
            ++    ++ LK AV+L +A+IIH+ G  +TLSEL S L  QP     L+R MR LVHM LF+K  + GE     YGL   +  L+K    C+   +  I D + + P H++     G   + +E   G N W YM ++P  +Q FN+AM +DS + +  +VK+C
Sbjct:   18 IYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYRVMRYLVHMKLFTKASIDGELR---YGLAPPAKYLVKGWDKCMVGSILAITDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKEC 178          
BLAST of CK935389 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23
Identity = 60/186 (32.26%), Postives = 98/186 (52.69%), Query Frame = 2
Query:  101 ISVRELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSTLFRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISKWF-KGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRKIFE 655
            +S  +L +    V   ++   ++MSLK A++LGI DI+H HGRP+TLS+L+ ++ I   KT    R MR LV+   F +       +E  Y LT  S LL+K+    ++PLV  +LDP    P H +S+WF      + +E  +G  +W+ +   P   + F++AM  DS +   +     + + E
Sbjct:   10 LSTEQLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCFQRLMRALVNSNFFIEEN-NSNNQEVCYWLTPASCLLLKEAPLTVTPLVQVVLDPTFTNPWHHMSEWFTHEKHATQFEAANGCTFWEKLANEPSKGRFFDEAMSCDSRLIAHVFTKDYKHVIE 194          
BLAST of CK935389 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19
Identity = 54/189 (28.57%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  110 RELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSTLFRFMRLLVHMGLFSKTKVGG---EKEEEAYGLTAISALLIKDKSYCL--SPLVSGILDPENIFPLHFISKWFKGN--DISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRKIFE 655
            + L +   ++    F  + +M+LK A+ L IAD IH HG   +LS+++S + + P++ S+L R MR+L    +F    +GG   +  E  Y LT +S LLI  +S  L  +PL + +LDP  + P   +  WF+    D  +++  HG+  W+    +       N  + SDS++ + +      ++F+
Sbjct:   11 QSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRVSSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQSSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQ 199          
BLAST of CK935389 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 45/178 (25.28%), Postives = 88/178 (49.44%), Query Frame = 2
Query:  122 EGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSTLFRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRKIFE 655
            +    V ++++    ++ L+ AVELGI DII ++ +P+ L++L S L +       L+R +R LV M +    K   +  ++ Y L  I+ LL ++    + P++ G+   + + P H +      N  + +E   G   W+Y+  +P  SQ FN+ M  ++ +    +    R +F+
Sbjct:   13 KAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYRILRYLVKMEILRVEK--SDDGQKKYALEPIATLLSRNAKRSMVPMILGMTQKDFMTPWHSMKDGLSDNG-TAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQ 187          
BLAST of CK935389 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13
Identity = 59/188 (31.38%), Postives = 91/188 (48.40%), Query Frame = 2
Query:   65 IEVMDTIENEGGISVRELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSTLFRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPEN-------IFPLHFISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDS 607
            ++  +T +N+  I  +       QV + +F     + L+  V LGI DIIH++G P+TLS+LV+ L ++ T       FMR LVHM LF+ +     KE++ Y LT  S LL+      L+P V     PE        I  L     +++ ND S++E   G         +P +++  N AM S S
Sbjct:    1 MDTPNTFQNDDEIKAQ------AQVWKHMFGFAETIMLRSTVSLGIPDIIHNNG-PVTLSQLVTHLPLKSTSIDRFHHFMRYLVHMQLFTISTDQITKEDK-YELTPASKLLVHGHQKSLAPYVMLQTHPEEFSVWSHVINVLDGKKPYWESNDTSMYEKTEG---------DPEINEILNDAMTSHS 171          
The following BLAST results are available for this feature:
BLAST of CK935389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
7OMT9_MEDSA1.253e-3037.14Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA1.637e-3037.14Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
7OMT6_MEDSA1.637e-3037.14Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
CVMT1_OCIBA2.990e-2433.33Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
6OMT_COPJA1.938e-2336.59(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
EOMT1_OCIBA2.531e-2332.26Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
ZRP4_MAIZE4.940e-1928.57O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
4OMT_COPJA5.652e-1525.283'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
COOMT_COPJA9.024e-1331.38Columbamine O-methyltransferase OS=Coptis japonica... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004562_C05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935389 ID=CK935389; Name=CK935389; organism=Citrus sinensis; type=EST; length=700bp
GGGGAATCCACCAACCATTAGTCTCAGGCATTGAAAACTAAAGGNNNANG
TAAAGGAGAGATCAATTGAAGTCATGGATACCATTGAAAATGAAGGAGGG
ATAAGTGTAAGAGAGCTGTTTGAAGGTCACGGTCAAGTCATTAGGCTTGT
ATTTAATCATTTAAGTGCGATGTCACTCAAGGGCGCGGTTGAGCTAGGCA
TAGCGGACATAATTCACAGCCACGGAAGGCCCATCACTCTCTCTGAGCTA
GTCTCAGCACTTAAAATTCAGCCTACAAAAACTAGTACTCTATTCCGTTT
CATGCGTCTGTTAGTTCACATGGGCTTGTTTTCCAAAACCAAAGTTGGAG
GAGAAAAAGAAGAAGAAGCTTATGGCCTCACAGCTATTTCTGCACTGCTC
ATCAAAGACAAGTCCTACTGTTTGTCACCACTTGTTTCAGGAATTCTTGA
CCCAGAAAATATCTTTCCACTCCATTTTATAAGTAAATGGTTCAAAGGGA
ATGATATCTCAGTATGGGAAACTGTCCACGGAAAGAACTATTGGGATTAT
ATGAATCAAAACCCTGGATTAAGTCAGCGGTTTAATCAAGCAATGATAAG
TGATTCCGAAATGGCAATCTTTATTGTCAAAGACTGCTGCAGGAAAATCT
TTGAAGGGTTGGGCTCCATTGTTGACGTCGGAGGTGGAAATGGTGGATTT
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