CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13444 contig Csv1_Contig13444:266..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG2_XENLA (CTP synthase 2 OS=Xenopus laevis GN=ctps2 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 9.342e-59
Identity = 104/167 (62.28%), Postives = 130/167 (77.84%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            E +IP+LGICLGMQ+AV+EFAR++L + DANSTEFDPNTKNP VI MPE     MGGTMRLGSR+T F+  +    KLY N+ F++ERHRHRYEVNP+++ + E  GL F G+D   QRMEI+EL  HPYF+GVQFHPE+ SRP KPSP +LG + AA G+L+T +Q
Sbjct:  390 ERKIPFLGICLGMQLAVVEFARNILKMTDANSTEFDPNTKNPAVIDMPEHHPGDMGGTMRLGSRKTVFKTSESVVKKLYDNQDFVEERHRHRYEVNPELVQQFEEKGLKFVGQDNEGQRMEIIELEGHPYFVGVQFHPEFCSRPMKPSPPYLGFMLAASGKLNTYVQ 556          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG2_BOVIN (CTP synthase 2 OS=Bos taurus GN=CTPS2 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.667e-56
Identity = 104/167 (62.28%), Postives = 133/167 (79.64%), Query Frame = 2
Query:   11 RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDT-LIQG 508
            +IP+LG+CLGMQ+AVIEFAR+ LNL+DA+STEF+PN + P VI MPE +  ++GGTMRLG RRT F+ ++    KLYG+  FI+ERHRHRYEVNP +I++LE   LSF G+D   +RMEI+EL NHPYF+GVQFHPE+ SRP KPSP +LGL+ AA G L+  L+QG
Sbjct:  392 KIPFLGVCLGMQLAVIEFARNCLNLKDADSTEFEPNARVPVVIDMPEHNPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHRHRYEVNPSLISQLEQKDLSFVGQDVDGERMEIIELANHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAYLLQG 558          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG2_RAT (CTP synthase 2 OS=Rattus norvegicus GN=Ctps2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.154e-55
Identity = 105/165 (63.64%), Postives = 128/165 (77.58%), Query Frame = 2
Query:   11 RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            +IP+LGICLGMQ+AVIEFAR+ LNL+DANSTEFDPNT  P VI MPE +   +GGTMRLG RRT F  ++    KLYG+  +I+ERHRHRYEVNP++I + EN  L F G+D   +RMEI+EL  HPYFIGVQFHPE+ SRP KPSP +LGL+ AA G L+T +Q
Sbjct:  392 KIPFLGICLGMQLAVIEFARNCLNLKDANSTEFDPNTPVPLVIDMPEHNPGDLGGTMRLGLRRTVFTTENSILKKLYGDVPYIEERHRHRYEVNPNLINQFENKDLCFVGEDVDGKRMEIIELTGHPYFIGVQFHPEFSSRPMKPSPPYLGLLLAATGTLNTHLQ 556          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG2_CHICK (CTP synthase 2 OS=Gallus gallus GN=CTPS2 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.184e-55
Identity = 105/192 (54.69%), Postives = 134/192 (69.79%), Query Frame = 2
Query:   17 PYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSG--SQGNLSAKLGNGIAMEKVYQKGTT 586
            P+LG+CLGMQ+AV+EFAR+ LN +DANSTEFDP+TK+P VI MPE +   MGGTMRLG RRT F+ ++    KLYG+  F++ERHRHRYEVNP++    E  GL F G D    RME++EL NHPYF+GVQFHPE+ SRP KPSP +LGL+ AA G L+  +Q     S     + L +  + EK + K  T
Sbjct:  394 PFLGVCLGMQLAVVEFARNCLNWKDANSTEFDPDTKSPVVIDMPEHNPGDMGGTMRLGKRRTVFKTQNSILRKLYGDEMFVEERHRHRYEVNPELTHCFEEKGLKFVGHDTEGNRMEMIELENHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATGTLNAYLQRGCKLSPSESYSDLSDDSSPEKEFPKSET 585          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG2_MOUSE (CTP synthase 2 OS=Mus musculus GN=Ctps2 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.069e-54
Identity = 104/165 (63.03%), Postives = 128/165 (77.58%), Query Frame = 2
Query:   11 RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            +IP+LGICLGMQ+AVIEFAR+ LNL+DANSTEF+PNT  P VI MPE +   +GGTMRLG RRT F  ++    KLYG+  +I+ERHRHRYEVNP++I + EN  L F G+D   +RMEIVEL +HPYFIGVQFHPE+ SRP KPSP +LGL+ AA G L+  +Q
Sbjct:  392 KIPFLGICLGMQLAVIEFARNCLNLKDANSTEFEPNTPVPLVIDMPEHNPGDLGGTMRLGLRRTVFTTENSILKKLYGDVPYIEERHRHRYEVNPNLINQFENKDLCFVGEDVDGKRMEIVELTSHPYFIGVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAHLQ 556          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG2_HUMAN (CTP synthase 2 OS=Homo sapiens GN=CTPS2 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.182e-53
Identity = 100/165 (60.61%), Postives = 127/165 (76.97%), Query Frame = 2
Query:   11 RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            +IP+LG+CLGMQ+AVIEFAR+ LNL+DA+STEF PN   P VI MPE +  ++GGTMRLG RRT F+ ++    KLYG+  FI+ERHRHR+EVNP++I + E   LSF G+D    RMEI+EL NHPYF+GVQFHPE+ SRP KPSP +LGL+ AA G L+  +Q
Sbjct:  392 KIPFLGVCLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAYLQ 556          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYG1B_XENLA (CTP synthase 1-B OS=Xenopus laevis GN=ctps-B PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.965e-52
Identity = 95/163 (58.28%), Postives = 122/163 (74.85%), Query Frame = 2
Query:   17 PYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            P+LG+CLGMQ+AV+EFAR VL+ +DANSTEF+P T +P VI MPE +   MGGTMRLG RRT F  ++    KLYG   +++ERHRHRYEVNP++   LE  GL F G+D   +RMEIVEL +HPYF+GVQ+HPE+ SRP KPSP + GL+ A+ G+L   I+
Sbjct:  394 PFLGVCLGMQLAVVEFARDVLDWKDANSTEFNPKTSHPVVIDMPEHNPGQMGGTMRLGKRRTIFHSQNSVMKKLYGGHEYVEERHRHRYEVNPELRRELEARGLKFVGQDTEGERMEIVELEDHPYFVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLSQYIE 556          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG1_MOUSE (CTP synthase 1 OS=Mus musculus GN=Ctps PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.887e-51
Identity = 95/163 (58.28%), Postives = 123/163 (75.46%), Query Frame = 2
Query:   17 PYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            P+LG+CLGMQ+AV+EF+R+VL  +DANSTEFDP T +P VI MPE +   MGGTMRLG RRT FQ K+    KLYG+  +++ERHRHR+EVNP +   LE  GL F G+D   +RMEIVEL +HP+F+GVQ+HPE+ SRP KPSP + GL+ A+ G+L   +Q
Sbjct:  394 PFLGVCLGMQLAVVEFSRNVLGWQDANSTEFDPKTSHPVVIDMPEHNPGQMGGTMRLGKRRTLFQTKNSVMRKLYGDTDYLEERHRHRFEVNPVLKKCLEEQGLKFVGQDVEGERMEIVELEDHPFFVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLPHYLQ 556          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG1_DANRE (CTP synthase 1 OS=Danio rerio GN=ctps PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.887e-51
Identity = 93/163 (57.06%), Postives = 123/163 (75.46%), Query Frame = 2
Query:   17 PYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            P+LG+CLGMQ+AV EFAR++L+  DANSTEFDP TK+P VI MPE +   MGGTMRLG RRT F+ K     KLYG+  +++ERHRHR+EVNP++    E  G  F G+D   +RME++E+ +HPYF+GVQ+HPE+ SRP KPSP +LGL+ AA G+L + +Q
Sbjct:  394 PFLGVCLGMQLAVCEFARNMLDWTDANSTEFDPETKHPVVIDMPEHNPGQMGGTMRLGKRRTIFKNKSSILRKLYGDVDYVEERHRHRFEVNPELKHHFEEKGFRFVGQDVEGERMEVIEMDDHPYFVGVQYHPEFTSRPIKPSPPYLGLLLAAAGRLQSYLQ 556          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYG1A_XENLA (CTP synthase 1-A OS=Xenopus laevis GN=ctps-A PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.464e-51
Identity = 95/163 (58.28%), Postives = 120/163 (73.62%), Query Frame = 2
Query:   17 PYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            P+LG+CLGMQ+AV+EFAR VL   DANSTEF+P T +P VI MPE +   MGGTMRLG RRT F  ++    KLYG   +++ERHRHRYEVNP++   LE  GL F G+D   +RMEIVEL +HPYF+GVQ+HPE+ SRP KPSP + GL+ A+ G+L   I+
Sbjct:  394 PFLGVCLGMQLAVVEFARDVLGWTDANSTEFNPKTSHPVVIDMPEHNPGQMGGTMRLGKRRTIFHSQNSIMKKLYGGHEYVEERHRHRYEVNPELRRELEVRGLKFVGQDTEGERMEIVELEDHPYFVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLSQYIE 556          
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG2_XENLA9.342e-5962.28CTP synthase 2 OS=Xenopus laevis GN=ctps2 PE=2 SV=... [more]
PYRG2_BOVIN9.667e-5662.28CTP synthase 2 OS=Bos taurus GN=CTPS2 PE=2 SV=1[more]
PYRG2_RAT2.154e-5563.64CTP synthase 2 OS=Rattus norvegicus GN=Ctps2 PE=2 ... [more]
PYRG2_CHICK8.184e-5554.69CTP synthase 2 OS=Gallus gallus GN=CTPS2 PE=2 SV=1[more]
PYRG2_MOUSE1.069e-5463.03CTP synthase 2 OS=Mus musculus GN=Ctps2 PE=1 SV=1[more]
PYRG2_HUMAN1.182e-5360.61CTP synthase 2 OS=Homo sapiens GN=CTPS2 PE=1 SV=1[more]
PYG1B_XENLA4.965e-5258.28CTP synthase 1-B OS=Xenopus laevis GN=ctps-B PE=2 ... [more]
PYRG1_MOUSE1.887e-5158.28CTP synthase 1 OS=Mus musculus GN=Ctps PE=1 SV=2[more]
PYRG1_DANRE1.887e-5157.06CTP synthase 1 OS=Danio rerio GN=ctps PE=1 SV=1[more]
PYG1A_XENLA2.464e-5158.28CTP synthase 1-A OS=Xenopus laevis GN=ctps-A PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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