CK935432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935432 vs. ExPASy Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37 Identity = 86/143 (60.14%), Postives = 107/143 (74.83%), Query Frame = 3 Query: 12 VPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKS-QGSEQLTKEKLIAAFSCESSSIQP 437 VPNISKMDKASLLGDAI+YI ELQ K+K+ME ER G + LS N + +P+VDIQA ++EVVVRV PLDSHPASR+IQA +++ ++++E+KLS D +FHTFVIKS GS+ LTKEKLIAAF E+SS QP Sbjct: 418 VPNISKMDKASLLGDAISYIKELQEKVKIMEDERV---GTDKSLS----ESNTITVEESPEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNNGSDPLTKEKLIAAFYPETSSTQP 553
BLAST of CK935432 vs. ExPASy Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.624e-34 Identity = 78/148 (52.70%), Postives = 106/148 (71.62%), Query Frame = 3 Query: 12 VPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAAFSCE-SSSIQPLSSVG 452 VPNISKMDKASLLGDA++YINEL AKLKVMEAERE L + SNP + + D+++Q + ++V VR++CPL+SHPASR+ AF+++++ V+ S L D V HTFV+K SE+LTKEKLI+A S E ++S+Q +S G Sbjct: 456 VPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL--------GYSSNPPISLDS---DINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVK---SEELTKEKLISALSREQTNSVQSRTSSG 589
BLAST of CK935432 vs. ExPASy Swiss-Prot
Match: BH003_ARATH (Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.156e-22 Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 3 Query: 6 AGVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQG---SEQLTKEKLIAAFS 413 A VPNISKMDKASLL DAI YI ++Q K++V E E++ + ESN Q +VD Q HD+ VVR+SCPL++HP S+VIQ ++ ++ +S ++ + V HTF ++ QG +EQL K+KL+A+ S Sbjct: 341 AVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMKRR-------ESN-----QITPAEVDYQQRHDDAVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGGCTAEQL-KDKLLASLS 466
BLAST of CK935432 vs. ExPASy Swiss-Prot
Match: ATR2_ARATH (Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.450e-16 Identity = 52/149 (34.90%), Postives = 83/149 (55.70%), Query Frame = 3 Query: 6 AGVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL---------SGN------SRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAA 407 A VPN+SKMDKASLLGDAI+YINEL++KL+ E+++E + GN SR SN + + + ++D++ +V++RV C HP +R ++A K+ + V + LS ND++ +K GS+ ++L A Sbjct: 436 AVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVK-MGSQFFNHDQLKVA 583
BLAST of CK935432 vs. ExPASy Swiss-Prot
Match: BH004_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.767e-15 Identity = 49/147 (33.33%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 6 AGVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL----------SGNSRDLSAFESNPNVESQNRAP-DVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAAFS 413 A VPN+SKMDKASLLGDAI+YI+EL++KL+ E+++E L +GN++ N ES +VD++ + ++R+ C +HP ++ ++A K+ + V + LS ND++ +K G++ T+++L A + Sbjct: 437 AVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVK-MGNQFFTQDQLKVALT 582
BLAST of CK935432 vs. ExPASy Swiss-Prot
Match: RAP1_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.605e-13 Identity = 48/146 (32.88%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 6 AGVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGN---------SRDLSAFESNPNVESQNRAP---DVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAA 407 A VPN+SKMDKASLLGDAIAYINEL++K+ E+E+ + R SA + + + P +++++ + ++RV +HPA+R++ A D ++ V + +S ND++ +K G T+E+L A+ Sbjct: 473 AVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVK-MGFRIYTQEQLRAS 617
BLAST of CK935432 vs. ExPASy Swiss-Prot
Match: BH028_ARATH (Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11 Identity = 40/128 (31.25%), Postives = 66/128 (51.56%), Query Frame = 3 Query: 6 AGVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNSRDLSAFESNPNV--------ESQNRAPDVDIQAAH-DEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIK 362 A VPN+SKMDK SLL DA+ YINEL++K + +E E+ + +L N E + ++++ D+ +VRV D HP +R++ A D ++ V + +S ND++ +K Sbjct: 364 AVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVK 491 The following BLAST results are available for this feature:
BLAST of CK935432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935432 ID=CK935432; Name=CK935432; organism=Citrus sinensis; type=EST; length=756bpback to top |