CK935477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935477 vs. ExPASy Swiss-Prot
Match: S35A3_RAT (UDP-N-acetylglucosamine transporter OS=Rattus norvegicus GN=Slc35a3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12 Identity = 62/243 (25.51%), Postives = 108/243 (44.44%), Query Frame = 3 Query: 180 SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFALIFMAKEG-----TLKKLSSQWTLVGSLTASGL--PATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIILRQRQSMQQXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDQILFYGIVPVLVASVLSGLASALCQWASQVKKHSSYLMTIEMSIVGSLCLLASISKSPDGEAIRQHGFFYGWTPLTLIPXIFNS 878 SL+LT++Y R ++ E + +T+V+ E K++ + + K+ TL ++ L + L P+ IY LQN+LL ++ NLD+ T+ + Q KI+ TALF+ +L ++ M Q F G++ VL+A SG A + + K S ++ I++ GS+ L + DGE + ++GFF G+ LT I + + Sbjct: 19 SLVLTMRYS-------RTLKEEGPRYLSSTAVVVAEFLKIMACIFLVYKDSKCSVRTLNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLGKKLGMYQWLSLVILMAGVAFVQWPSDSQELNSKDLSTGSQFVGLMAVLIACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYVY-DGELVSKNGFFQGYNQLTWIVVVLQA 253
BLAST of CK935477 vs. ExPASy Swiss-Prot
Match: S35A3_CANFA (UDP-N-acetylglucosamine transporter OS=Canis familiaris GN=SLC35A3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12 Identity = 60/243 (24.69%), Postives = 106/243 (43.62%), Query Frame = 3 Query: 180 SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTAS-------GLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIILRQRQSMQQXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDQILFYGIVPVLVASVLSGLASALCQWASQVKKHSSYLMTIEMSIVGSLCLLASISKSPDGEAIRQHGFFYGWTPLTLIPXIFNS 878 SL+LT++Y R ++ E + +T+V+ EL K++ ++ + K+ + L + +P+ IY LQN+LL ++ NLD+ T+ + Q KI+ TALF+ +L ++ + Q F G++ VL A SG A + + K S ++ I++ GS+ L + DGE + ++GFF G+ LT I I + Sbjct: 19 SLVLTMRYS-------RTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRILHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQELDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGV-YIYDGELVSKNGFFQGYNRLTWIVVILQA 253
BLAST of CK935477 vs. ExPASy Swiss-Prot
Match: S35A3_BOVIN (UDP-N-acetylglucosamine transporter OS=Bos taurus GN=SLC35A3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12 Identity = 59/243 (24.28%), Postives = 106/243 (43.62%), Query Frame = 3 Query: 180 SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTAS-------GLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIILRQRQSMQQXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDQILFYGIVPVLVASVLSGLASALCQWASQVKKHSSYLMTIEMSIVGSLCLLASISKSPDGEAIRQHGFFYGWTPLTLIPXIFNS 878 SL+LT++Y R ++ E + +T+V+ EL K++ ++ + K+ + L + +P+ IY LQN+LL ++ NLD+ T+ + Q KI+ TALF+ +L ++ + Q F G++ VL A SG A + + K S ++ I++ GS+ L + DGE + ++GFF G+ LT I + + Sbjct: 19 SLVLTMRYS-------RTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRILHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQELNSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYVY-DGELVSKNGFFQGYNRLTWIVVVLQA 253
BLAST of CK935477 vs. ExPASy Swiss-Prot
Match: S35A3_HUMAN (UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35A3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11 Identity = 59/243 (24.28%), Postives = 106/243 (43.62%), Query Frame = 3 Query: 180 SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTAS-------GLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIILRQRQSMQQXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDQILFYGIVPVLVASVLSGLASALCQWASQVKKHSSYLMTIEMSIVGSLCLLASISKSPDGEAIRQHGFFYGWTPLTLIPXIFNS 878 SL+LT++Y R ++ E + +T+V+ EL K++ ++ + K+ + L + +P+ IY LQN+LL ++ NLD+ T+ + Q KI+ TALF+ +L ++ + Q F G++ VL A SG A + + K S ++ I++ GS+ L + DGE + ++GFF G+ LT I + + Sbjct: 19 SLVLTMRYS-------RTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQLDSKELSAGS-QFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGV-YIYDGELVSKNGFFQGYNRLTWIVVVLQA 252
BLAST of CK935477 vs. ExPASy Swiss-Prot
Match: S35A3_MOUSE (UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35a3 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11 Identity = 58/237 (24.47%), Postives = 102/237 (43.04%), Query Frame = 3 Query: 180 SLLLTLQYGVQPLISKRCIRRE---VIVTTSVLTCELAKVIFALIFMAKEGTLKKLSSQWTLVGSLTAS-------GLPATIYALQNSLLQISYRNLDSLTFSMLNQTKIIFTALFTYIILRQRQSMQQXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDQILFYGIVPVLVASVLSGLASALCQWASQVKKHSSYLMTIEMSIVGSLCLLASISKSPDGEAIRQHGFFYGWTPLTLI 860 SL+LT++Y R ++ E + +T+V+ E K++ + + K+ + L + +P+ IY LQN+LL ++ NLD+ T+ + Q KI+ TALF+ +L ++ + Q F G++ VL A SG A + + K S ++ I++ GS+ L + DGE + ++GFF G+ LT I Sbjct: 19 SLVLTMRYS-------RTLKEEGPRYLSSTAVVVAEFLKIMACIFLVYKDSKCSVRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLGKKLGVYQWLSLVILMAGVAFVQWPSDSQELNSKDLSTGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYVY-DGELVSKNGFFQGYNQLTWI 247 The following BLAST results are available for this feature:
BLAST of CK935477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935477 ID=CK935477; Name=CK935477; organism=Citrus sinensis; type=EST; length=880bpback to top |