CK935627

Overview
NameCK935627
Unique NameCK935627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12143 contig Csv1_Contig12143:180..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 2.811e-57
Identity = 108/144 (75.00%), Postives = 125/144 (86.81%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 429
            DALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA  ++ EFTWF DK A S L
Sbjct:  178 DALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 2.811e-57
Identity = 108/144 (75.00%), Postives = 125/144 (86.81%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 429
            DALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA  ++ EFTWF DK A S L
Sbjct:  178 DALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.760e-51
Identity = 96/142 (67.61%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 429
            +ALSAE AA+DYETCLKHL  +NIL  S +TGFPKFDLMLLGMGPDGH+ASLFPGH L  E++KWV  I DSPKPP ERITFTFPVINSSA++A+VVCG+GK+ AV+ AL   +  ++ P    SAE+E  WFLDK A+SKL
Sbjct:  186 EALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAAL--KKTGNVPPAGSVSAEDELVWFLDKPASSKL 325          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.760e-51
Identity = 97/144 (67.36%), Postives = 115/144 (79.86%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 429
            D LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  + Q +SDLLPV+M S +E   TWF DK A S L
Sbjct:  181 DTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 8.760e-51
Identity = 97/144 (67.36%), Postives = 115/144 (79.86%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 429
            D LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  + Q +SDLLPV+M S +E   TWF DK A S L
Sbjct:  181 DTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.736e-36
Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = 1
Query:   10 LSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 429
            L+A+G AE     YE CLK+L K  I+  S  TG+P+FDL LLGMGPDGH+ASLFP HP + E +KWVT+I DSPKPPP+RITFT PVINS+ Y  M +C    + +V   + +N  S  LP    SA+ E  W+LD+ A S+L
Sbjct:  111 LAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSVAEIMKHNNLS--LPSAHLSAQVENVWYLDQAAASEL 252          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.950e-35
Identity = 74/139 (53.24%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   13 SAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 429
            +AE AAE YE CLK     NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  + E  KWVT I DSPKPP +RIT T PVIN ++Y  M VC   ++ +V  AL + ++   LP    +A+ E  WFLD+ A SKL
Sbjct:  116 NAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVCDKEQADSVAAALNHTKD---LPAGRLTADVEVVWFLDQAAASKL 251          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.561e-34
Identity = 73/138 (52.90%), Postives = 92/138 (66.67%), Query Frame = 1
Query:   16 AEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 429
            A+ AA  YE CLK L   NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  +KE    VT+I DSPKPPP+RITFT PVIN ++Y  M VC   ++ AV     +N +   LP    +A+ E  WFLD+ A SK+
Sbjct:  123 AKSAALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTYITDSPKPPPKRITFTLPVINCASYNLMAVCDEAQADAVAKVFNHNFD---LPAAWLTADVEAIWFLDQAAASKI 257          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.405e-32
Identity = 71/147 (48.30%), Postives = 92/147 (62.59%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNS----DLLPVQMAS-AEEEFTWFLDKDATSKL 429
            D  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ +N +       LP +M    + +  WFLDK A S L
Sbjct:  120 DNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.405e-32
Identity = 71/147 (48.30%), Postives = 92/147 (62.59%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNS----DLLPVQMAS-AEEEFTWFLDKDATSKL 429
            D  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ +N +       LP +M    + +  WFLDK A S L
Sbjct:  120 DNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266          
The following BLAST results are available for this feature:
BLAST of CK935627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
6PGL4_ORYSJ2.811e-5775.00Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI2.811e-5775.00Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH8.760e-5167.61Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ8.760e-5167.36Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI8.760e-5167.36Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ARATH2.736e-3652.78Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL2_ARATH3.950e-3553.24Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL4_ARATH2.561e-3452.90Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL2_ORYSJ1.405e-3248.30Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL2_ORYSI1.405e-3248.30Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935627 ID=CK935627; Name=CK935627; organism=Citrus sinensis; type=EST; length=625bp
GGGGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTATGAGACTTGTCT
CAAGCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTACTGGTT
TTCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGACATATA
GCTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAAAAATGGGT
TACTTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAGAATCACTTTCA
CCTTCCCTGTAATCAACTCATCTGCATATATTGCAATGGTGGTGTGTGGT
GCTGGAAAATCAAGTGCAGTTCAAACTGCATTGGGTAATAATCAAAACTC
TGATTTGCTGCCAGTTCAAATGGCATCGGCTGAAGAAGAATTTACTTGGT
TTCTTGACAAAGACGCGACTTCAAAGCTGTAAGAGTCGGAACAATTAGCT
GTATGCGTGAATCCCTGTTATCTGCTATGATAATTGGTTTGATCTGTGTG
GTTTGACTACTAGTACTGCTGGATTTTGTTAATGAGAAAAGAGTGAACTT
GTTAATGCAAGTGAAAAAGATTTGAATAAATATAGTTTGATATTTTAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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