CK935645

Overview
NameCK935645
Unique NameCK935645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:56..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 4.317e-62
Identity = 87/110 (79.09%), Postives = 96/110 (87.27%), Query Frame = 2 
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            MEQTFIMIKPDGVQRGL+GE+I RFEKKGF+LKGLKL++V+R FAEKHYEDLSSK FF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPA S PGTIRGD AI  G
Sbjct:    1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIG 110

HSP 2 Score: 81.2629 bits (199), Expect = 4.317e-62
Identity = 32/37 (86.49%), Postives = 37/37 (100.00%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSDSVESA+KEIALWFPDGP+NWQSS+HPW+YE
Sbjct:  112 NVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.136e-61
Identity = 90/110 (81.82%), Postives = 97/110 (88.18%), Query Frame = 2 
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            ME TFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  G
Sbjct:    1 MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIG 110

HSP 2 Score: 73.1738 bits (178), Expect = 6.136e-61
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSD+VESA+KEIALWFP+G  NW SSLHPWIYE
Sbjct:  112 NVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.360e-60
Identity = 91/110 (82.73%), Postives = 98/110 (89.09%), Query Frame = 2 
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L++YI SGPVVAM+WEG+GVV TGR IIGATNP +SAPGTIRGD AI  G
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIG 110

HSP 2 Score: 69.707 bits (169), Expect = 1.360e-60
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:  112 NVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.773e-60
Identity = 92/110 (83.64%), Postives = 97/110 (88.18%), Query Frame = 2 
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            MEQTFIMIKPDGVQ GLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLSSKPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  G
Sbjct:    1 MEQTFIMIKPDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIG 110

HSP 2 Score: 68.9366 bits (167), Expect = 1.773e-60
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSD+VESA+K I LWFP+G  NW SSLHPWIYE
Sbjct:  112 NVIHGSDAVESARKVIGLWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.312e-60
Identity = 89/110 (80.91%), Postives = 94/110 (85.45%), Query Frame = 2 
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP  S PGTIRGD AI  G
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIG 110

HSP 2 Score: 72.7886 bits (177), Expect = 2.312e-60
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSD+VESA KEIALWFP+G +NWQSSLH WIYE
Sbjct:  112 NVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.931e-60
Identity = 89/110 (80.91%), Postives = 97/110 (88.18%), Query Frame = 2 
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            MEQTFIMIKPDGVQRGLVGEII RFEKKGF+LKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+S PGTIRGD AI  G
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIG 110

HSP 2 Score: 71.633 bits (174), Expect = 3.931e-60
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSD+VESA+KEI LWFP+G  NW SSLHPWIYE
Sbjct:  112 NVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.126e-60
Identity = 90/110 (81.82%), Postives = 98/110 (89.09%), Query Frame = 2 
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVV+M+WEG+GV+ TGR IIGATNP +SAPGTIRGD AI  G
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIG 110

HSP 2 Score: 68.9366 bits (167), Expect = 5.126e-60
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:  112 NVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 8.714e-60
Identity = 88/110 (80.00%), Postives = 94/110 (85.45%), Query Frame = 2 
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR +IGATNP  S PGTIRGD AI  G
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIG 110

HSP 2 Score: 71.2478 bits (173), Expect = 8.714e-60
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSD+V+SA KEIALWFPDG ++WQSSLH WIYE
Sbjct:  112 NVIHGSDAVDSATKEIALWFPDGVVHWQSSLHSWIYE 148
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.481e-59
Identity = 90/109 (82.57%), Postives = 96/109 (88.07%), Query Frame = 2 
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            EQTFIMIKPDGVQRGL+GEII RFEKKGF LKGLKL+TVDRPFAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI  G
Sbjct:    3 EQTFIMIKPDGVQRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIG 111

HSP 2 Score: 67.781 bits (164), Expect = 1.481e-59
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSD+VESA KEIALWFP+GP N QSS H WIYE
Sbjct:  113 NVIHGSDAVESANKEIALWFPEGPANCQSSQHSWIYE 149
[Close]
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.573e-58
Identity = 87/109 (79.82%), Postives = 93/109 (85.32%), Query Frame = 2 
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            EQTFIMIKPDGVQRGLVGEII RFEKKGF LKGLK + V+R FAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI  G
Sbjct:    3 EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFVNVERAFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIG 111

HSP 2 Score: 70.8626 bits (172), Expect = 3.573e-58
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:  406 NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 516
            N+IHGSD+VESA KEIALWFP+G  NW+SSLH WIYE
Sbjct:  113 NVIHGSDAVESANKEIALWFPEGAANWESSLHSWIYE 149
The following BLAST results are available for this feature:
BLAST of CK935645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_ARATH4.317e-6279.09Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDKB_FLABI6.136e-6181.82Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK1_TOBAC1.360e-6082.73Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDKA_FLABI1.773e-6083.64Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK1_MESCR2.312e-6080.91Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK_HELAN3.931e-6080.91Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK_CAPAN5.126e-6081.82Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SPIOL8.714e-6080.00Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK1_SOYBN1.481e-5982.57Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDK1_PEA3.573e-5879.82Nucleoside diphosphate kinase 1 OS=Pisum sativum G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004553_C05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935645 ID=CK935645; Name=CK935645; organism=Citrus sinensis; type=EST; length=677bp
GGGGATTCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAACA
AGTTGGTTTCTCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATC
AAGCCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATT
TGAGAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACC
GCCCTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTT
GGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTG
GGAGGGTGAAGGCGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCA
ACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGTG
ACGGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCCAGAAAGAA
ATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTCA
CCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTTC
CTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGTT
ACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCGAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top