CK935687

Overview
NameCK935687
Unique NameCK935687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935687 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.117e-60
Identity = 126/250 (50.40%), Postives = 164/250 (65.60%), Query Frame = 2
Query:  122 TRKNNSSNTNDEXXXXXXXXXXXPVIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETK----WPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNY 859
            +RKN+  N N+             +++SSCS+T YP+LCF            KV S KDVI +SLN+T TAV+HNYF I+KL+  +++ LTKREK +LHDCLE +DETLDEL+K   +L+ YP   N KS+++ AD+LK L+SAAMTNQ TCLDGFSH+ A+K +R+ L +GQ+HV  MCSNALAMIKNMTD D+   ++   S  R+L +ET     WP WLS GDRRLLQ             GSGN+
Sbjct:   53 SRKNSGDNGNEPHHA---------ILKSSCSSTRYPDLCFSAIAAVPEASK-KVTSQKDVIEMSLNITTTAVEHNYFGIQKLL--KRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYP---NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDM---MIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNF 284          
BLAST of CK935687 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.060e-59
Identity = 124/246 (50.41%), Postives = 164/246 (66.67%), Query Frame = 2
Query:  128 KNNSSNTNDEXXXXXXXXXXXPVIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDI-VDHYSKARRL-DDETKWPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNY 859
            K++S N++D             +++S+CS TL+PELC+            KV S KDVI LSLN+T+ AV+ NY+A+K+LI TRK  LT REK +LHDCLE +DETLDEL+    +L+ YP   N KS+ E  ++LK L+S+A+TNQETCLDGFSH+ ADKK+R+ L++GQ HV  MCSNALAMI NMTD DI  ++ +   +  R+L +D  +WPEWLSAGDRRLLQ             GSG+Y
Sbjct:   43 KSHSKNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSK-KVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKG-LTPREKVALHDCLETMDETLDELHTAVEDLELYP---NKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMTDTDIANEMKLSAPANNRKLVEDNGEWPEWLSAGDRRLLQSSTVTPDVVVAADGSGDY 283          
BLAST of CK935687 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.060e-59
Identity = 126/250 (50.40%), Postives = 164/250 (65.60%), Query Frame = 2
Query:  122 TRKNNSSNTNDEXXXXXXXXXXXPVIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETK----WPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNY 859
            +RKN+  N N+             +++SSCS+T YP+LCF            KV S KDVI +SLN+T TAV+HNYF I+KL+  +++ LTKREK +LHDCLE +DETLDEL+K   +L+ YP   N KS+++ AD+LK L+SAAMTNQ TCLDGFSH+ A+K +R+ L +GQ+HV  MCSNALAMIKNMTD D+   ++   S  R+L +ET     WP WLS GDRRLLQ             GSGN+
Sbjct:   53 SRKNSGDNGNEPHHA---------ILKSSCSSTRYPDLCFSAIAAVPEASK-KVTSQKDVIEMSLNITTTAVEHNYFGIQKLL--KRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYP---NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDM---MIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAADGSGNF 284          
BLAST of CK935687 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.887e-57
Identity = 124/242 (51.24%), Postives = 153/242 (63.22%), Query Frame = 2
Query:  194 VIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGK-----DIVDHYSKARRLDDETK---------------WPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNY 859
            V+RSSCS+T YPELC             ++ S KDVI  S+NLTITAV+HNYF +KKLI  RK  LT REKT+LHDCLE +DETLDEL++T  +L  YP     K++ E A +LK L+S+A+TNQETCLDGFSH+ ADK++R+ L++GQ+HV HMCSNALAMIKNMTD DI        I  +  K +  + ET                WP WLSAGDRRLLQ             GSG +
Sbjct:   58 VLRSSCSSTRYPELCISAVVTAGGV---ELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKG-LTPREKTALHDCLETIDETLDELHETVEDLHLYPT---KKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSGVKADATVAADGSGTF 292          
BLAST of CK935687 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 5.096e-54
Identity = 117/234 (50.00%), Postives = 150/234 (64.10%), Query Frame = 2
Query:  194 VIRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIG------KDIVDHYSKARRLD------DETKWPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNY 859
            +++S CS+TLYPELCF            ++ S K+VI  SLNLT  AV+HNYFA+KKLI  RK  LT RE T+LHDCLE +DETLDEL+    +L  YP     KS+ + AD+LK L+S+A+TNQ TCLDGFS++ AD+K+R+ L++GQ+HV HMCSNALAMIKNMT+ DI       K      +  R+L       D   WP+WLS GDRRLLQ             GSG++
Sbjct:   61 ILKSVCSSTLYPELCFSAVAATGGK---ELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKG-LTPREVTALHDCLETIDETLDELHVAVEDLHQYP---KQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGSTIKADATVADDGSGDF 287          
BLAST of CK935687 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15
Identity = 48/164 (29.27%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  197 IRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKN 688
            I++SC+ T YP +C               N+P+++   +L +++T  Q     +K+L   +   L  R+  ++HDCLE V+++LD + ++  E++    A  N     +   ++  VSAA+T++ TC+DGF+ +  D KI+E +    + V  + SNALA++ N
Sbjct:   29 IKTSCTLTTYPAVCEQSLSAYAKTIQ---NNPQELASTALQVSLTRTQQAQTFMKRL--NKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGN-DFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNN 186          
BLAST of CK935687 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.166e-12
Identity = 51/180 (28.33%), Postives = 88/180 (48.89%), Query Frame = 2
Query:  296 DVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKK----------IREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQ 805
            +++  +LN TI+ V  +      L+    S L+ R+  +  DCLE++D+T+ +L     +L+ +    +N         +K+L+SAAMTN  TCLDGF+    D+           + E L E   ++    S++LAM++N+     GK           + ++  +P W+S  DR LLQ
Sbjct:   39 ELVVTALNQTISNVNLSSSNFSDLLQRLGSNLSHRDLCAFDDCLELLDDTVFDLTTAISKLRSHSPELHN---------VKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENIPGHIPGK-----------VKEDVGFPMWVSGSDRNLLQ 198          
BLAST of CK935687 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.968e-11
Identity = 50/207 (24.15%), Postives = 97/207 (46.86%), Query Frame = 2
Query:  197 IRSSCSATLYPELCFXXXXXXXXXXXXKVNSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRL----DDETKWPEWLSAGDRRLLQ 805
            I  +C  T +PELC               +S KD+I +++N+T+    H  ++   L       +  R +++   C+E++D+++D L +         A ++  S + +  ++   +SAA+TN +TC +GF     D  +++ +     ++  + SN LA+     DGD   D      + RRL    + E K+P W+   +R +L+
Sbjct:   87 ISKACELTRFPELCVDSLMDFPGSLA--ASSSKDLIHVTVNMTLHHFSHALYSSASLSFV---DMPPRARSAYDSCVELLDDSVDALSR---------ALSSVVSSSAKPQDVTTWLSAALTNHDTCTEGFDGV-DDGGVKDHMTAALQNLSELVSNCLAIFSASHDGD---DFAGVPIQNRRLLGVEEREEKFPRWMRPKEREILE 275          
The following BLAST results are available for this feature:
BLAST of CK935687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PME1_CITSI8.117e-6050.40Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC1.060e-5950.41Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME3_CITSI1.060e-5950.40Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME3_ARATH2.887e-5751.24Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME2_ARATH5.096e-5450.00Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
21KD_DAUCA7.954e-1529.2721 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME40_ARATH2.166e-1228.33Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME34_ARATH6.968e-1124.15Probable pectinesterase/pectinesterase inhibitor 3... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004552_G03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935687 ID=CK935687; Name=CK935687; organism=Citrus sinensis; type=EST; length=862bp
GCGGGGACGAAANNNAGCCTTATCAACAAAAANNNTTACCACAATGGCAC
AACCCAGAAAGCTTTTCTTGGCTCTCTTTGCATTAGTCCTCGTAGTCACT
GCCGTTGTCACTATAATAGCCACCAGAAAGAACAACTCTAGCAACACAAA
TGATGAGCACATTGCGGCTCATGCTCATGCTTACGCTCACCCAGTTATCA
GATCTTCCTGCAGTGCCACATTGTACCCAGAGCTATGCTTCTCAGCACTC
TCCGCAGCTCCAGCTGCTGCAGTGTCAAAAGTGAACAGCCCAAAAGATGT
GATACGACTGTCGCTCAACCTCACCATCACTGCAGTTCAACACAACTACT
TCGCCATCAAGAAACTCATCACCACTCGCAAGAGCACGCTCACGAAGCGT
GAGAAGACTTCACTACACGACTGTCTCGAAATGGTCGATGAAACTCTCGA
CGAGCTTTACAAAACTGAACATGAGCTTCAGGGTTATCCTGCAGCAGCTA
ATAACAAGTCGATAGCTGAACAAGCTGATGAGTTAAAGATCCTTGTGAGT
GCTGCAATGACTAATCAAGAAACTTGCCTTGATGGGTTCTCCCACGAGCG
CGCTGATAAAAAGATCCGTGAAGAATTAATGGAGGGTCAAATGCACGTGT
TTCACATGTGCAGCAATGCCTTGGCAATGATCAAGAACATGACTGATGGT
GATATAGGCAAAGACATTGTTGATCATTACTCTAAAGCCCGGCGTCTTGA
TGATGAAACGAAATGGCCTGAGTGGTTATCAGCTGGGGACAGGAGGCTGC
TGCAGGCGACAACGGTGGTACCTGATGTTACCGTGGCGGCTGATGGAAGC
GGTAACTACCTG
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