CK935760

Overview
NameCK935760
Unique NameCK935760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1192 contig Csv1_Contig1192:375..1300. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 6.166e-109
Identity = 199/263 (75.67%), Postives = 221/263 (84.03%), Query Frame = 3
Query:  138 MAGKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGRVIDITPGPSAMLTF 926
            MAGK LMHA+QYNSYGGGAA L+HV++PVPTP  +EV LKLEAT+LNPVDWKIQKG +RPFLPRKFPCIPATD            K FKAGDKVVA L++L   GGGLAEFAVA E  TV RP EV AAE + LPVAGLTA QALT  AG+KLDG+G++ NILVTAASGGVGHYAVQLAKL N HVTA+CGARNIEFVKSLGADEVLDYKTP+GAALKSPSG+KYDAV+HCA GIP+S FEPNL  NG+VIDITPGP+AM T+
Sbjct:    1 MAGK-LMHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHL--GGGGLAEFAVATEKLTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNLSENGKVIDITPGPNAMWTY 260          
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 6.603e-103
Identity = 186/263 (70.72%), Postives = 213/263 (80.99%), Query Frame = 3
Query:  138 MAGKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGRVIDITPGPSAMLTF 926
            MA K LMHA+QY+ YGGG   LKHVE+ VP P  DE+LLK+EA  LNP+DWKIQKG LRP LPRKFP IP TD              FK GDKVVA L++    GG LAE+AVAKE+ TVARP EVSAAEG+ LPVA LTAHQALTQ A +KLDGSG++KNIL+TAASGGVGHYAVQLAKLGNTHVTA+CGARN++FVK LGADEVLDYKTP+GA+L SPSG+KYD V+H A+GIPWSTFEPNL   G+VID+TPGP+AM+TF
Sbjct:    1 MAAK-LMHAIQYSGYGGGTDALKHVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRKFPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVLSH--ATGGALAEYAVAKENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAKLGNTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGASGIPWSTFEPNLSEAGKVIDLTPGPTAMMTF 260          
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 6.325e-21
Identity = 76/234 (32.48%), Postives = 110/234 (47.01%), Query Frame = 3
Query:  156 MHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNG----GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQ---SAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK--LGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHC 830
            M A  Y+ YGG         + VP   +D+VL+K+ A ALNPVD K ++G+ +       P +P  D            K  K GD+V A ++     G    G LAE+   +E     +P  +  A+ +GLP+A  TA + L +   SAG         K+ILV   +GGVG   +QLAK   G + V A+     +E V+SLGAD  +DY   +   L       +DA+  C
Sbjct:   78 MKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKA-TDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAG---------KSILVLNGAGGVGSLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMC 301          
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: RT4I1_DANRE (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.837e-18
Identity = 67/230 (29.13%), Postives = 102/230 (44.35%), Query Frame = 3
Query:  117 HRVLAVKMAGKPLMHAVQYNSYGGGAA--DLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRK------------FPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDY 764
            +R  +   A + +M A   + YG        K+  LP+     +EV++K+ A  LNP+D  ++ G     +  K            FP I   D            K FK GD+V A +       G LAEF V   +    +P  +   E + +P    TA  A+  + G+  D S + K +L+   SGGVG +A+Q+ K    HVT +C       V+ LGAD+V+DY
Sbjct:   16 YRSFSFSAARRTVMPAWVIDKYGKNDVLRFTKNAALPI-IHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIP--PWKQGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAK-KRVLILGGSGGVGTFAIQMVKAWGAHVTVTCSQNAERLVRDLGADDVVDY 241          
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: RT4I1_HUMAN (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.011e-18
Identity = 60/189 (31.75%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  240 DEVLLKLEATALNPVDWKIQKGQLRPFLPRK------------FPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKT 770
            +EV++K+ A ++NP+D  ++ G     L  K            FP     D            K FK GD+V A +       G L+EF V   +    +P  ++  + + LP   LTA  A+ +  G+  D +   K +L+  ASGGVG +A+Q+ K  + HVTA C     E V+ LGAD+V+DYK+
Sbjct:   72 NEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP--PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLN-DKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKS 257          
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.011e-18
Identity = 62/207 (29.95%), Postives = 101/207 (48.79%), Query Frame = 3
Query:  240 DEVLLKLEATALNPVDWKIQKGQLRPFLPRK------------FPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVI 824
            +EV++K+ A ++NP+D  ++ G     L  K            FP     D            + FK GD+V A +       G L+EF V   +    +P  ++  + + LP   LTA  A+ +  G+  D +   K +L+  ASGGVG +A+Q+ K  + HVTA C     E V+ LGAD+V+DYK+ +  A +  S + +D ++
Sbjct:   72 NEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVP--PWKQGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLN-DRNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEA-QLKSSKPFDFIL 274          
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.248e-17
Identity = 74/254 (29.13%), Postives = 114/254 (44.88%), Query Frame = 3
Query:  144 GKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKG--QLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGRVI 890
            G+ LM A++   +GG        ++ VP P   +VL+K++A  +NPVD  I+ G   ++P L    P  P  D              FK GD+V        T  GG AE+A+A + +    P ++   +G+ + +   TA++AL  SA VK       +++LV  ASGGVG  A Q+A+     V  +       + V   GA +V ++K  D      KS   +  D +I     +  S     L   GRVI
Sbjct:    4 GQKLMRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNIKPLL----PYTPGFDVAGIIEAVGESVSAFKKGDRVFT----TRTISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVK-----PGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQKIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEMLANVNLSNDLNLLSHGGRVI 244          
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: RT4I1_MOUSE (Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 59/187 (31.55%), Postives = 89/187 (47.59%), Query Frame = 3
Query:  240 DEVLLKLEATALNPVDWKIQKGQLRPFLPRK------------FPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDY 764
            +EV++K+ A ++NP+D  ++ G     L  K            FP     D            K F+ GD+V A +       G L+EF V   +    +P  ++  + + LP   LTA  A+ +  G+  D + + K  L+  ASGGVG +A+Q+ K    HVTA C     E V+ LGADEV+DY
Sbjct:   72 NEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVP--PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLS-DKNCKGKRALILGASGGVGTFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDY 255          
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: QOR_LAMGU (Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 76/259 (29.34%), Postives = 117/259 (45.17%), Query Frame = 3
Query:  144 GKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIE-FVKSLGADEVLDYKTPDGA-ALKSPSGRK-YDAVIHCATGIPWSTFEPNLGTNGRVIDI-TPGP 908
            G+ LM A++ + +GG        ++ VP P + +VL+K++A  +NPVD  I+ G        + P  P  D              FK GD+V        T  GG AE+A+A + +    P E+   +G+ + V   TA++AL  SA  K       +++LV  ASGGVG  A Q+A+     V  + G    +  V   GA EV +++       +K   G K  D +I     +  S     L   GRVI + + GP
Sbjct:    4 GQRLMRAIRVSEFGGPEVLKLQSDVAVPIPEEHQVLIKVQACGVNPVDTYIRSGTYS--RKPRLPYTPGLDVAGLIEAVGERVSAFKKGDRVFT----TSTVSGGYAEYALAADHTVYKLPGELDFQKGAAIGVPYFTAYRALLHSACAKAG-----ESVLVHGASGGVGLAACQIARACCFKVLGTAGTEEGQRVVLQNGAHEVFNHREDINIDKIKKSVGEKGIDVIIEMLANVNLSNDLNLLSQGGRVIIVGSKGP 251          
BLAST of CK935760 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 75/254 (29.53%), Postives = 116/254 (45.67%), Query Frame = 3
Query:  144 GKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKG--QLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGA-ALKSPSGRK-YDAVIHCATGIPWSTFEPNLGTNGRVI 890
            G+ LM A++   +GG        ++ VP P   +VL+K+ A  +NPV+  I+ G    +P L    P  P +D              FK GD+V  F     T  GG AEFA++ +++T   P  +   +G+ L +   TA +AL  SA  +       +++LV  ASGGVG    Q+A+     V  + G+    + V   GA EV ++K  +    +K+ +G K  D +I        S     L   GRVI
Sbjct:    4 GQKLMRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSRKPAL----PYTPGSDVAGIIESVGDGVSAFKKGDRVFCF----STVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAG-----ESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYIDKIKTSAGDKGVDVIIEMLANKNLSNDLKLLSCGGRVI 244          
The following BLAST results are available for this feature:
BLAST of CK935760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
QORH_ARATH6.166e-10975.67Putative quinone-oxidoreductase homolog, chloropla... [more]
QORH_SPIOL6.603e-10370.72Quinone-oxidoreductase homolog, chloroplastic OS=S... [more]
QORL_ARATH6.325e-2132.48Quinone oxidoreductase-like protein At1g23740, chl... [more]
RT4I1_DANRE3.837e-1829.13Reticulon-4-interacting protein 1 homolog, mitocho... [more]
RT4I1_HUMAN5.011e-1831.75Reticulon-4-interacting protein 1, mitochondrial O... [more]
RT4I1_BOVIN5.011e-1829.95Reticulon-4-interacting protein 1, mitochondrial O... [more]
QOR_BOVIN3.248e-1729.13Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2[more]
RT4I1_MOUSE5.541e-1731.55Reticulon-4-interacting protein 1, mitochondrial O... [more]
QOR_LAMGU5.541e-1729.34Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE... [more]
QOR_RAT1.234e-1629.53Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_A07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935760 ID=CK935760; Name=CK935760; organism=Citrus sinensis; type=EST; length=926bp
GGGGGGCCACCCAAAGGGAAGCGAGTACACTATCACTGCGTTACATACAT
ATTATAATCGTATGCAGAGTGGTCTCTTTGATTCTATCGATAGCACACTC
GAAATCCCAGAAACGGCATCGTGTATTAGCTGTGAAAATGGCAGGAAAGC
CTCTTATGCACGCGGTTCAGTATAATTCTTATGGTGGAGGAGCTGCTGAT
TTGAAGCATGTTGAACTGCCGGTTCCTACCCCAAGCAAAGATGAGGTTTT
GCTTAAACTTGAAGCAACTGCTCTAAATCCGGTTGACTGGAAAATCCAGA
AGGGCCAGTTACGCCCTTTTTTGCCTCGCAAGTTTCCTTGCATACCTGCA
ACTGATGTAGCAGGAGAGGTCGTAGGGGTAGGATCAGAAGTTAAAATTTT
CAAAGCTGGTGACAAAGTTGTAGCTTTTCTTAACTACCTCGTAACTAATG
GAGGTGGACTAGCTGAGTTTGCTGTGGCTAAGGAGAGCTCGACAGTTGCT
AGGCCATCAGAGGTTTCAGCAGCTGAAGGTTCTGGCTTGCCTGTTGCTGG
TCTCACTGCTCACCAGGCCCTTACTCAATCTGCAGGTGTCAAGCTTGATG
GAAGTGGGCAACAGAAAAACATTCTAGTAACTGCTGCCTCAGGGGGTGTA
GGTCACTATGCTGTTCAGTTGGCGAAGCTTGGAAACACGCACGTGACTGC
CTCTTGTGGGGCTCGCAACATTGAATTTGTCAAGAGTTTAGGGGCTGATG
AGGTTCTTGATTACAAGACACCTGACGGGGCAGCTCTAAAGAGTCCATCT
GGTCGAAAATACGATGCAGTGATCCACTGTGCAACAGGGATTCCCTGGTC
TACTTTTGAGCCTAATCTGGGCACAAATGGGAGGGTGATAGATATCACTC
CTGGCCCTAGTGCGATGCTGACTTTT
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