CK935896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: NUD26_ARATH (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26 PE=1 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 5.207e-80 Identity = 138/194 (71.13%), Postives = 164/194 (84.54%), Query Frame = 3 Query: 99 NYPHKLPKSTNLPLVHH--QNQICSSSY----SMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 662 NYP K K ++LP +H ++++ SSS SM++PPEGYRRNVG+CL+NSSKKIF ASRLDIP +WQMPQGGIDE EDP+VA +RELKEETGV SAE+LAE P+W+TYDFPP+VREKLK +WG DWKGQAQKWFLLKFTGK+EEINLLGD +EKPEFGEW W SP+Q++E AV+FKKPVYKEV + F HLQ Sbjct: 23 NYPSKPIKFSSLPFLHRCRKSRVSSSSARCCSSMESPPEGYRRNVGVCLMNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWITYDFPPDVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDGTEKPEFGEWSWTSPDQVVENAVEFKKPVYKEVMSAFASHLQ 216
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: NUD27_ARATH (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27 PE=1 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.206e-60 Identity = 111/190 (58.42%), Postives = 141/190 (74.21%), Query Frame = 3 Query: 123 STNLPLVHHQNQICSSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ*YYVGIVRDS 692 S+ PLV + S + ++++PP GYR+NVGICL++ +KIF AS++ IPD+WQMPQGG DE ED + AA REL+EETGV+SAE +AE+P WLTYDFP EV++KL +W +KGQAQKWFL KFTGKEEEINLLGD + KPEF W WM PEQ++E AV FK+PVY+ V F P Y+V +DS Sbjct: 36 SSPKPLVVLSVALSSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWFLFKFTGKEEEINLLGDGTAKPEFKVWSWMLPEQVIEHAVYFKRPVYEHVIKQFNP----YFVDEEKDS 221
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: NUD25_ARATH (Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.062e-52 Identity = 91/158 (57.59%), Postives = 122/158 (77.22%), Query Frame = 3 Query: 180 MDAPPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEE--EINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 647 M+ P GYR NVG+CLINS +F ASRL++P +WQMPQGGI++ EDPK AA+REL+EETGV SAE+++EVP WLTYDFPP V+ K+ WGG+W GQAQKW+L++ E+ EINL ++++ EF EWKW PE+++E+AVD+K+P Y+EV F Sbjct: 1 MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEETGVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLANNEADS-EFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTF 157
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_RHORT (RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rppH PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.028e-36 Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 3 Query: 201 YRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEV 635 YR+ VGI LIN+ ++F A RLD P++WQMPQGGID EDP+ AA RE++EE G +A +L E WL YD P E+R +L WGG ++GQ QKWF +FTG++ +INL + PEF W+W+ + ++ V FK+PVY++V Sbjct: 14 YRQGVGIMLINARGQVFVARRLDSPEAWQMPQGGIDAGEDPETAAWREMEEEIGTRNALLLGETAGWLGYDLPEELRGRL---WGGRFQGQRQKWFAFRFTGQDADINL---ATAHPEFDAWRWVDVDTLVALIVPFKRPVYEQV 152
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_RHOSK (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=rppH PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.343e-35 Identity = 77/156 (49.36%), Postives = 101/156 (64.74%), Query Frame = 3 Query: 201 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQGGIDENEDPKVAALRELKEETGVSS--AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 659 YR VGI LIN IFA R+D P +WQMPQGGIDE E P+ AALREL EETG+ + E +A+ P W+TYD PPE+ L WGG ++GQ QKWFL ++ G +EE+ G ++ EF W+W+ E+++ V FK+ VY+EV F PHL Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAERVEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEV---GIGTDHAEFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_RHOS4 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rppH PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.343e-35 Identity = 77/156 (49.36%), Postives = 101/156 (64.74%), Query Frame = 3 Query: 201 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQGGIDENEDPKVAALRELKEETGVSS--AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 659 YR VGI LIN IFA R+D P +WQMPQGGIDE E P+ AALREL EETG+ + E +A+ P W+TYD PPE+ L WGG ++GQ QKWFL ++ G +EE+ G ++ EF W+W+ E+++ V FK+ VY+EV F PHL Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAERVEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEV---GIGTDHAEFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_DINSH (RNA pyrophosphohydrolase OS=Dinoroseobacter shibae (strain DFL 12) GN=rppH PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.290e-35 Identity = 72/156 (46.15%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 201 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQGGIDENEDPKVAALRELKEETGVS--SAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 659 YR+ VG+ L + + ++F R D +WQMPQGGI++ ED + AALREL EETGV+ EVLAE P W+ YD PPE+ ++ W G +KGQAQ+W L+KF G + +IN+ +++ PEF EW+W+ P +L+ V FK+ VY++VF F+ L Sbjct: 11 YRKCVGVVLWDGAGRVFTGQRYDSELPAWQMPQGGIEDGEDARTAALRELVEETGVAVEKVEVLAETPDWIKYDLPPEIVPRI---WKGRYKGQAQRWVLMKFLGSDADINI---ETKHPEFSEWRWLEPASVLDSIVPFKRDVYEQVFDAFSDWL 160
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_RHOS1 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rppH PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.991e-35 Identity = 76/156 (48.72%), Postives = 101/156 (64.74%), Query Frame = 3 Query: 201 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQGGIDENEDPKVAALRELKEETGVSS--AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 659 YR VGI LIN IFA R+D P +WQMPQGGIDE E P+ AALREL EETG+ + E +A+ P W+TYD PPE+ L WGG ++GQ QKWFL ++ G ++E+ G ++ EF W+W+ E+++ V FK+ VY+EV F PHL Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAERVEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDDEV---GIGTDHAEFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_RHOS5 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rppH PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.103e-35 Identity = 75/156 (48.08%), Postives = 101/156 (64.74%), Query Frame = 3 Query: 201 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQGGIDENEDPKVAALRELKEETGVSS--AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 659 YR VGI LIN IFA R+D P +WQMPQGGID +E P+ AALREL+EETG+ E +A+ P W+TYD PP++ L WGG ++GQ QKWFL ++ G +E+I G +E EF W+W+ E+++ V FK+PVY+ V +F HL Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDADEKPRQAALRELQEETGIPEDLVEFVAKAPEWVTYDLPPDL---LGRVWGGKYRGQRQKWFLFRYLGTDEQI---GIATEHAEFSCWRWIGAEEMVASIVPFKRPVYERVVAMFREHL 161
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_SILPO (RNA pyrophosphohydrolase OS=Silicibacter pomeroyi GN=rppH PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.623e-34 Identity = 70/156 (44.87%), Postives = 102/156 (65.38%), Query Frame = 3 Query: 201 YRRNVGICLINSSKKIFAASRLDI-PDSWQMPQGGIDENEDPKVAALRELKEETGVSS--AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 659 YR VG+ L+N +F R+D D+WQMPQGG+DE+EDP AALREL EETGV++ E++AE WL YD P ++ ++ W G ++GQ QKW+L +F G++++I+L ++ PEF WKW P++++ V FK+ VY+ V F PHL Sbjct: 11 YRPCVGVVLMNGDGFVFVGQRMDQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTADLVEMVAETDGWLPYDLPHDLVPRI---WKGRYRGQEQKWYLFRFLGRDDQIDL---ETGHPEFSRWKWQDPDRLVAEIVPFKRDVYERVVAAFAPHL 160 The following BLAST results are available for this feature:
BLAST of CK935896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 325
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935896 ID=CK935896; Name=CK935896; organism=Citrus sinensis; type=EST; length=841bpback to top |