CK935900

Overview
NameCK935900
Unique NameCK935900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11219 contig Csv1_Contig11219:399..1258. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.857e-73
Identity = 143/251 (56.97%), Postives = 185/251 (73.71%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALKPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGGYV 817
            RV IVTG+SRGIGREIA+++A+ GAK+VI+Y+SN   A+ VA+ IN+ +  +    RAI  KADV++P+QV  LFD+AE AF  P+H++VN+AG+ D KYPT+A TS +++DRIF VN +GAFLC +EAA              S+SLV    P Y AYTASKAAVE M +ILA+EL+GT ITANCVAPGP+AT+MFF GKSE  V+  ++  P  RLG+ +DVAP+V FLA+D  EWVN QV+RVNGG V
Sbjct:   22 RVAIVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINNKSPSSGDGVRAIVCKADVAEPSQVAQLFDTAEHAF-GPLHIVVNNAGVTDSKYPTLAQTSDEEWDRIFQVNCKGAFLCSREAAKRVVRGGGGRIINISSSLVAMPIPRYGAYTASKAAVEMMTRILAQELRGTQITANCVAPGPVATDMFFAGKSEAAVEAGVKSNPFERLGKVEDVAPLVAFLASDEGEWVNAQVVRVNGGQV 271          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.934e-37
Identity = 96/260 (36.92%), Postives = 146/260 (56.15%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALKPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMF------FDGKSEEMVKKVIEEC-----PHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +V +VTG+ RGIG  IA+ L Q GAK+V+NY ++   A+ V  EI S+ S       AI+++ADV DP  V  L D A + F   + ++ ++AG++   +  + + + D+FDR+F VN RG F   +EA               +T+ V  + P +A Y+ SK A++T  + LA +     IT N VAPG I T+MF      +    E    + ++EC     P NR+G   DVA VV FLA+DA+EW++G++I V+GG
Sbjct:   12 KVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREAAEKVVDEIKSNGSD------AISIQADVGDPDAVTKLMDQAVEHF-GYLDIVSSNAGIV--SFGHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHLREGGRIILTSSNTASVKGV-PRHAVYSGSKGAIDTFVRCLAIDCGDKKITVNAVAPGAIKTDMFLSVSREYIPNGETFTDEQVDECAAWLSPLNRVGLPVDVARVVSFLASDAAEWISGKIIGVDGG 261          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 2.793e-36
Identity = 91/252 (36.11%), Postives = 143/252 (56.75%), Query Frame = 2
Query:   62 DRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALKPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGGYV 817
            D+  IVTG+SRGIGR IA+ LA+ GA +V+NY+ N A+A+ V  EI S         +AI VKADVS+P  V+++       F S + +LVN+AG+   +   I     D++D + ++N +G F C K                 S+ +  +  PG A Y A+KA V  + K  AKEL    IT N +APG I+T+M  D  ++++  +++++ P  R G+  DV+ VV FLA++ + ++ GQ + ++GG V
Sbjct:    4 DKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGR------KAIAVKADVSNPEDVQNMIKETLSVF-STIDILVNNAGI--TRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDM-TDKLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGGMV 245          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: VER1_ASPPA (Versicolorin reductase OS=Aspergillus parasiticus GN=ver1 PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.438e-33
Identity = 87/260 (33.46%), Postives = 140/260 (53.85%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALKPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMF------FDGKSEEMVKKVIEEC-----PHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +V +VTG+ RGIG  IA+ L + GAK+V+NY  +   A+ V  +I ++ + A      I ++ADV DP     L     + F   + ++ ++AG++   +  + + + ++FDR+F VN RG F   +EA               +T+ V  + P +A Y+ SK A++T  + +A +     IT N VAPG I T+MF      +    E    + ++EC     P NR+G   DVA VV FLA+D +EWV+G++I V+GG
Sbjct:   10 KVALVTGAGRGIGAAIAVALGERGAKVVVNYAHSREAAEKVVEQIKANGTDA------IAIQADVGDPEATAKLMAETVRHFGY-LDIVSSNAGIVS--FGHLKDVTPEEFDRVFRVNTRGQFFVAREAYRHMREGGRIILTSSNTACVKGV-PKHAVYSGSKGAIDTFVRCMAIDCGDKKITVNAVAPGAIKTDMFLAVSREYIPNGETFTDEQVDECAAWLSPLNRVGLPVDVARVVSFLASDTAEWVSGKIIGVDGG 259          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.195e-32
Identity = 87/247 (35.22%), Postives = 135/247 (54.66%), Query Frame = 2
Query:   74 IVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +VTG+SRGIGR IA+ LA+ G  + +NY  +  +A+ V  EI +    +        ++A+V+D  +VK++       F S + VLVN+AG+       +      ++D +   N +G F C ++A               S S+VGA+  PG A Y A+KA V  + K  A+EL   GIT N VAPG I ++M  D  S+E+ ++++ + P  R GQ  D+A  V FLA+D ++++ GQ I VNGG
Sbjct:    8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS------FAIQANVADADEVKAMIKEVVSQFGS-LDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLS-SVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT-DALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.195e-32
Identity = 87/247 (35.22%), Postives = 135/247 (54.66%), Query Frame = 2
Query:   74 IVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +VTG+SRGIGR IA+ LA+ G  + +NY  +  +A+ V  EI +    +        ++A+V+D  +VK++       F S + VLVN+AG+       +      ++D +   N +G F C ++A               S S+VGA+  PG A Y A+KA V  + K  A+EL   GIT N VAPG I ++M  D  S+E+ ++++ + P  R GQ  D+A  V FLA+D ++++ GQ I VNGG
Sbjct:    8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS------FAIQANVADADEVKAMIKEVVSQFGS-LDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLS-SVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT-DALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.195e-32
Identity = 87/247 (35.22%), Postives = 135/247 (54.66%), Query Frame = 2
Query:   74 IVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +VTG+SRGIGR IA+ LA+ G  + +NY  +  +A+ V  EI +    +        ++A+V+D  +VK++       F S + VLVN+AG+       +      ++D +   N +G F C ++A               S S+VGA+  PG A Y A+KA V  + K  A+EL   GIT N VAPG I ++M  D  S+E+ ++++ + P  R GQ  D+A  V FLA+D ++++ GQ I VNGG
Sbjct:    8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS------FAIQANVADADEVKAMIKEVVSQFGS-LDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLS-SVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT-DALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.195e-32
Identity = 87/247 (35.22%), Postives = 135/247 (54.66%), Query Frame = 2
Query:   74 IVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +VTG+SRGIGR IA+ LA+ G  + +NY  +  +A+ V  EI +    +        ++A+V+D  +VK++       F S + VLVN+AG+       +      ++D +   N +G F C ++A               S S+VGA+  PG A Y A+KA V  + K  A+EL   GIT N VAPG I ++M  D  S+E+ ++++ + P  R GQ  D+A  V FLA+D ++++ GQ I VNGG
Sbjct:    8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS------FAIQANVADADEVKAMIKEVVSQFGS-LDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLS-SVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT-DALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.195e-32
Identity = 87/247 (35.22%), Postives = 135/247 (54.66%), Query Frame = 2
Query:   74 IVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +VTG+SRGIGR IA+ LA+ G  + +NY  +  +A+ V  EI +    +        ++A+V+D  +VK++       F S + VLVN+AG+       +      ++D +   N +G F C ++A               S S+VGA+  PG A Y A+KA V  + K  A+EL   GIT N VAPG I ++M  D  S+E+ ++++ + P  R GQ  D+A  V FLA+D ++++ GQ I VNGG
Sbjct:    8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS------FAIQANVADADEVKAMIKEVVSQFGS-LDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLS-SVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT-DALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 3.195e-32
Identity = 87/247 (35.22%), Postives = 135/247 (54.66%), Query Frame = 2
Query:   74 IVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +VTG+SRGIGR IA+ LA+ G  + +NY  +  +A+ V  EI +    +        ++A+V+D  +VK++       F S + VLVN+AG+       +      ++D +   N +G F C ++A               S S+VGA+  PG A Y A+KA V  + K  A+EL   GIT N VAPG I ++M  D  S+E+ ++++ + P  R GQ  D+A  V FLA+D ++++ GQ I VNGG
Sbjct:    8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS------FAIQANVADADEVKAMIKEVVSQFGS-LDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLS-SVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT-DALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
The following BLAST results are available for this feature:
BLAST of CK935900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
SDR1_PICAB2.857e-7356.97Short-chain type dehydrogenase/reductase OS=Picea ... [more]
STCU_EMENI1.934e-3736.92Versicolorin reductase OS=Emericella nidulans GN=s... [more]
FABG_BACSU2.793e-3636.113-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
VER1_ASPPA6.438e-3333.46Versicolorin reductase OS=Aspergillus parasiticus ... [more]
FABG_STAAW3.195e-3235.223-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS3.195e-3235.223-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR3.195e-3235.223-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN3.195e-3235.223-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM3.195e-3235.223-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC3.195e-3235.223-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004389_D03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935900 ID=CK935900; Name=CK935900; organism=Citrus sinensis; type=EST; length=860bp
GGGGAACCCAATGGCCACCAGCACCAATACCCCATCGCTTTCACTCCCAC
TACCACTCAAAGATCGAGTTGTAATAGTGACCGGCTCATCTCGGGGAATC
GGCCGAGAAATCGCGATTCACCTTGCCCAACTCGGAGCCAAACTCGTCAT
CAACTACACCTCCAACTCGGCTCAAGCCGACGTCGTAGCCGCCGAGATTA
ACTCGTCGGCTTCCCCTGCCACATATCCGCCACGAGCCATTACTGTCAAA
GCCGACGTTTCGGATCCGGCCCAGGTCAAGTCTCTCTTTGACTCCGCTGA
GCAGGCTTTTGACTCGCCGGTTCATGTCCTGGTTAACTCCGCTGGGTTGC
TTGATCCGAAGTACCCCACTATTGCAAACACTTCCTTGGATGACTTTGAT
CGTATTTTCAGTGTCAATGCAAGGGGTGCATTCTTATGTTGCAAAGAGGC
AGCAAATAGGCTAGAACGCGGTGGCGGGGGTAGGATTATTCTGATATCAA
CATCACTGGTTGGCGCATTGAAGCCAGGGTATGCCGCGTACACAGCATCC
AAGGCAGCGGTGGAGACAATGGCGAAGATACTAGCAAAGGAGCTCAAGGG
AACCGGAATAACAGCAAATTGCGTAGCTCCAGGGCCGATTGCAACTGAGA
TGTTCTTTGATGGGAAGAGTGAGGAGATGGTGAAGAAGGTGATTGAAGAG
TGCCCGCATAATCGGCTTGGCCAGAGCAAGGATGTTGCTCCTGTTGTTGG
ATTCTTGGCCACTGATGCTAGTGAGTGGGTTAATGGGCAAGTAATTCGTG
TTAATGGTGGGTATGTCTAGGTTTTAGTAAGTATTCCTCATAGAATATTT
AAAGGAGTTG
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