CK936034

Overview
NameCK936034
Unique NameCK936034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7157 contig Csv1_Contig7157:181..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 9.948e-92
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
            IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct:   46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

HSP 2 Score: 81.2629 bits (199), Expect = 9.948e-92
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGL+FTKLFSRLFAKKEMRILMVGLDA GKTTILYKLKLGEIV
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 275.404 bits (703), Expect = 1.693e-91
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
            IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL+WLSNNIA+KA
Sbjct:   46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLEWLSNNIASKA 181

HSP 2 Score: 82.4185 bits (202), Expect = 1.693e-91
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGLSFTKLFSRLFAKKEMRILMVGLDA GKTTILYKLKLGEIV
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 276.559 bits (706), Expect = 2.881e-91
Identity = 133/136 (97.79%), Postives = 133/136 (97.79%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
            IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct:   46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

HSP 2 Score: 80.4925 bits (197), Expect = 2.881e-91
Identity = 41/43 (95.35%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGLSF KLFSRLFAKKEMRILMVGLDA GKTTILYKLKLGEIV
Sbjct:    1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 3.759e-91
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
            IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct:   46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

HSP 2 Score: 79.7221 bits (195), Expect = 3.759e-91
Identity = 41/43 (95.35%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGLSF KLFSRLFAKKEMRILMVGLDA GKTTILYKLKLGEIV
Sbjct:    1 MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 275.404 bits (703), Expect = 3.759e-91
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
            IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct:   46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

HSP 2 Score: 81.2629 bits (199), Expect = 3.759e-91
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGL+FTKLFSRLFAKKEMRILMVGLDA GKTTILYKLKLGEIV
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 6.396e-91
Identity = 131/136 (96.32%), Postives = 133/136 (97.79%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
            IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEI DKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+K+
Sbjct:   46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIIDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKS 181

HSP 2 Score: 82.4185 bits (202), Expect = 6.396e-91
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGLSFTKLFSRLFAKKEMRILMVGLDA GKTTILYKLKLGEIV
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 6.998e-90
Identity = 131/136 (96.32%), Postives = 132/136 (97.06%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
            IPTIGFNVETVEY+ ISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEITDK GLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct:   46 IPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

HSP 2 Score: 80.8777 bits (198), Expect = 6.998e-90
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGLSFTKLFSRLFAKKEMRILMVGLDA GKTTILY+LKLGEIV
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYQLKLGEIV 43
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 2.027e-89
Identity = 129/136 (94.85%), Postives = 133/136 (97.79%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
            IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEITDKLGL+SLRQRHWYIQSTCAT+GEGLYEGLDWLS+NIA K+
Sbjct:   46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLNSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIATKS 181

HSP 2 Score: 81.2629 bits (199), Expect = 2.027e-89
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGL+FTKLFSRLFAKKEMRILMVGLDA GKTTILYKLKLGEIV
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 2.644e-89
Identity = 131/136 (96.32%), Postives = 133/136 (97.79%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
            IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDRDRV EARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI++KA
Sbjct:   46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNISSKA 181

HSP 2 Score: 77.411 bits (189), Expect = 2.644e-89
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGLSFTKL  RLF+KKEMRILMVGLDA GKTTILYKLKLGEIV
Sbjct:    1 MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 4.499e-89
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANK DLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+ANK
Sbjct:   46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNLANK 180

HSP 2 Score: 74.7146 bits (182), Expect = 4.499e-89
Identity = 38/43 (88.37%), Postives = 38/43 (88.37%), Query Frame = 1 
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGL FTK  SRLF KKEMRILMVGLDA GKTTILYKLKLGEIV
Sbjct:    1 MGLRFTKALSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
The following BLAST results are available for this feature:
BLAST of CK936034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
ARF2_ORYSJ9.948e-9297.79ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF_VIGUN1.693e-9197.06ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF2_ARATH2.881e-9197.79ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF1_ARATH3.759e-9197.79ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF1_ORYSJ3.759e-9197.06ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF1_DAUCA6.396e-9196.32ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF1_CATRO6.998e-9096.32ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]
ARF_MAIZE2.027e-8994.85ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF1_SALBA2.644e-8996.32ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]
ARF1_CHLRE4.499e-8997.04ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_G04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936034 ID=CK936034; Name=CK936034; organism=Citrus sinensis; type=EST; length=672bp
AAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCAGGCTTTTTGCTAAGAA
AGAGATGAGAATTCTCATGGTAGGTCTCGATGCACCTGGTAAGACTACTA
TCCTGTACAAGCTTAAGCTCGGAGAGATCGTCNNACACCATTCCTACCAT
TGGATTTAATGTAGAGACCGTTGAGTATAAGAACATCAGCTTTACTGTCT
GGGATGTTGGGGGTCAAGACAAGATCCGACCTTTGTGGAGACATTATTTC
CAAAACGCCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGCGACCG
TGTGGTAGAAGCTAGGGATGAGTTGCACAGAATGTTGAATGAGGATGAAT
TGAGAGATGCTGTGCTGCTTGTATTTGCTAACAAGCACGATCTTCCAAAT
GCAATGAATGCTGCTGAGATAACTGACAAGCTTGGCCTTCACTCTCTTCG
CCAGCGCCACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGGC
TGTATGAGGGACTTGACTGGCTCTCAAACAACATTGCAAACAAGGCATAG
ACAACTAAATTTTGAGTTTTGGGTTGCCGCAACTGCTGAAATACAGAGTT
AACAACACATCTCAAGTGTTCTTGCTTTCCTTCCTGTAATAGCTTCGTTG
CCCGTTTTACTGTGTTTGTTGT
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