CK936037

Overview
NameCK936037
Unique NameCK936037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK936037 vs. ExPASy Swiss-Prot
Match: SUVR3_ARATH (Histone-lysine N-methyltransferase SUVR3 OS=Arabidopsis thaliana GN=SUVR3 PE=2 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.305e-33
Identity = 90/205 (43.90%), Postives = 112/205 (54.63%), Query Frame = 1 
Query:  103 NQFLQWARLILPWLTPGELANVSLTCRTLSQISKSITLSRSLDASRSVENFPIPFHNAADKTPYAYFIYTPSQIIXXXXXXXXXXRQFWASTNAAADAESN---SSLSRLGFDSVSLVXXXXXXXXXXXXXXXXXVGLGDGVFGCPCFSGLEDVGIVXXXXXXXXXXXXXXNRLTQRGISVRLKIVRSVNKGWGLYADQFIKQGQ 708
            ++FL+ A LILPWL P ELA V+ TC+TLS ISKS+T+ RSLDA+RS+EN  IPFHN+ D   YAYFIYTP QI           RQ+W +      +ES     S+S  G   VSLV                     +G   C  F+G+E+  I               NR+TQ+G+SV LKIVR   KGW LYADQ IKQ +
Sbjct:   26 DRFLRCANLILPWLNPRELAVVAQTCKTLSLISKSLTIHRSLDAARSLENISIPFHNSIDSQRYAYFIYTPFQI---PASSPPPPRQWWGAAANECGSESRPCFDSVSESGRFGVSLVDESGCECERCE----------EGYCKCLAFAGMEE--IANECGSGCGCGSDCSNRVTQKGVSVSLKIVRDEKKGWCLYADQLIKQAR 215
The following BLAST results are available for this feature:
BLAST of CK936037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SUVR3_ARATH1.305e-3343.90Histone-lysine N-methyltransferase SUVR3 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004387_F01 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936037 ID=CK936037; Name=CK936037; organism=Citrus sinensis; type=EST; length=862bp
GGGGGACACAGCATTGAAAACTCGATGGCATTCAGCAAAGCACCGACGGA
GCTGATAAACCGTCACAAAAGAACCATCGAAGTAGATGAAGAACAAAAGC
AGAATCAATTCCTTCAGTGGGCTCGCTTAATACTCCCATGGCTAACCCCA
GGGGAGCTCGCCAACGTATCTCTTACATGCAGAACCCTTTCCCAAATCTC
CAAATCCATCACTCTCTCCCGCTCTCTCGATGCCTCCAGGTCCGTCGAGA
ATTTCCCGATCCCATTTCACAATGCCGCCGACAAAACCCCCTACGCCTAC
TTCATTTACACCCCATCACAGATAATCCCTCCTCCTTGTCCTGCCCAATT
CCCACCACGCCAATTTTGGGCCTCCACCAATGCTGCTGCTGATGCTGAAT
CCAACTCTTCTCTGAGTCGACTCGGGTTTGACTCAGTGAGTCTTGTCTGC
GAGTCAGACGAAAGTGAATCTGGGTGCGACTGTGAAGAGTGTTTTGAGGT
GGGACTTGGTGACGGGGTATTTGGGTGTCCGTGTTTTTCGGGTCTGGAGG
ATGTGGGCATAGTGAGTGAGTGCGGACCGAGTTGCGGGTGCGGGTCTGAG
TGTGGGAATCGGTTGACTCAGAGAGGAATATCGGTGAGATTGAAGATTGT
GAGGAGTGTGAATAAAGGGTGGGGTTTATATGCCGATCAATTCATAAAGC
AAGGGCAATTCTGTGAGTACGCAGGTATCGGCAAAATGGAAATGTATGTT
GGCATTTTTGTAATATTTGTTTAGAGTTTTTGATGCTTGTGATTTTAATT
ATACATGTGCCTAGTTGCATCTGCTTGATGATTATTTGATACAGTAAGAC
TTATTATTAGAT
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