CK936044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 4.496e-75 Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 2 Query: 134 KIGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAV 670 KIG+IRAAIPKHCWVK+P RS+SYV RD +F++WF WPLYWVAQGT+FWAIFVLGHDCGHGSFS+ PLLNS VGHILHS ILVPY+GWRISHRTHHQNHG+VE+DESWVP+PEK+Y L STR+LR++ WYRSPGK+GSHFNPYSSLF+P ERK + Sbjct: 32 KIGDIRAAIPKHCWVKSPLRSMSYVTRDIFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKLYKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKEGSHFNPYSSLFAPSERKLI 210
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 4.971e-74 Identity = 127/180 (70.56%), Postives = 138/180 (76.67%), Query Frame = 2 Query: 134 KIGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAVV 673 KI +IRAAIPKHCW K+ RSLSYVLRD FN+WFFWPLYW AQGTMFWA+FVLGHDCGHGSFS S LNSFVGHILHS ILVPYNGWRISHRTHHQNHG+VE DESWVP+ EK+Y LD TR+LR+S W RSPGK+GSHFNPYS+LFSPGERK VV Sbjct: 31 KIADIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAISFNSWFFWPLYWPAQGTMFWALFVLGHDCGHGSFSNSSKLNSFVGHILHSLILVPYNGWRISHRTHHQNHGHVEKDESWVPLTEKVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKEGSHFNPYSNLFSPGERKGVV 210
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 7.178e-73 Identity = 121/179 (67.60%), Postives = 142/179 (79.33%), Query Frame = 2 Query: 134 KIGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAV 670 KIG+IRAAIPKHCWVK+P RS+SYV+RD + ++WF WPLYW AQGT+FWAIFVLGHDCGHGSFS+ PLLNS VGHILHS ILVPY+GWRISHRTHHQNHG+VE+DESWVP+PE++Y KL STR+LR++ YRSPGK+GSHFNPYSSLF+P ERK + Sbjct: 35 KIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLFAPSERKLI 213
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 6.077e-72 Identity = 128/212 (60.38%), Postives = 147/212 (69.34%), Query Frame = 2 Query: 41 MEKERKLKNEESANGVVEKGXXXXXXXXXXX--KIGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAV 670 M K+ K + NG +KG KI EIRA+IPKHCWVKNPWRSLSYVLRD HF+ W W +Y QGTMFWA+FVLGHDCGHGSFS+SPLLNS VGHILHSSILVPY+GWRISHRTHHQNHG++E DESWVP+ EKIY LDS TR++RF+ + RSPGK+GSHFNPYS+LF P ERK + Sbjct: 1 MVKDTKPLAYAANNGYQQKGSSFDFDPSAPPPFKIAEIRASIPKHCWVKNPWRSLSYVLRDVLVIAALVAAAIHFDNWLLWLIYCPIQGTMFWALFVLGHDCGHGSFSDSPLLNSLVGHILHSSILVPYHGWRISHRTHHQNHGHIEKDESWVPLTEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSERKGI 212
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.553e-70 Identity = 126/223 (56.50%), Postives = 149/223 (66.82%), Query Frame = 2 Query: 17 SVSLLAAAMEKERKLKNEESANGVVE----KGXXXXXXXXXXXKIGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAVV 673 +VS ++ ++ER E NG+V KG + +IRAAIPKHCWVKNPWRS+SYVLRD +FN W WPLYW QGTMFWA+FVLGHDCGHGSFS +P LNS VGH+LHSSILVPY+GWRISHRTHHQNHG+VE+DESW P+ EKI+ LD+ T+ LRFS W RSPGK GSHF+P S LF P ERK ++ Sbjct: 73 NVSTVSGEDDRER-----EEFNGIVNVDEGKGEFFDAGAPPPFTLADIRAAIPKHCWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFKSLDNVTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDII 290
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.288e-69 Identity = 121/218 (55.50%), Postives = 145/218 (66.51%), Query Frame = 2 Query: 20 VSLLAAAMEKERKLKNEESANGVVEKGXXXXXXXXXXXKIGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAVV 673 VS ++ E + +N+E V+ G K+ +IR AIPKHCWVK+PWRS+ YV+RD +FN W WPLYW AQ TMFWA+FVLGHDCGHGSFS P LNS VGHILHSSILVPY+GWRISHRTHHQNHG+VE+DESW P+ EKIY LD++T+ LRF+ W RSPGK GSHF+P S LF P E+K V+ Sbjct: 64 VSAPLRVLQVEEEEENKEGER-VINGGEEFDPGAPPPFKLSDIREAIPKHCWVKDPWRSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNDPKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYKNLDTATKKLRFTLPFPLLAYPIYLWSRSPGKQGSHFHPDSDLFVPNEKKDVI 280
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 8.213e-69 Identity = 116/179 (64.80%), Postives = 132/179 (73.74%), Query Frame = 2 Query: 137 IGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAVV 673 + +IRAAIPKHCWVKNPW+SLSYV+RD + N W WPLYW+AQGTMFWA+FVLGHDCGHGSFS P LNS VGH+LHSSILVPY+GWRISHRTHHQNHG+VE+DESW PM EKIY+ LD TR RF+ W RSPGK GSH++P S LF P ERK V+ Sbjct: 98 LADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVL 276
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.121e-68 Identity = 117/180 (65.00%), Postives = 134/180 (74.44%), Query Frame = 2 Query: 134 KIGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAVV 673 ++ EIR IPKHCWVK+P RSLSYV+RD H ++W F+PLYW QGTMFWAIFVLGHDCGHGSFS+S LLN+ VGHILHS+ILVPY+GWRISH+THHQNHGNVE DESWVPMPEK+Y+K+ ST+ LR+ RSPGK GSHFNPYS LF P ERK VV Sbjct: 31 RLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAIHLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPLLAYPMYLMKRSPGKSGSHFNPYSDLFQPHERKYVV 210
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 9.080e-68 Identity = 113/179 (63.13%), Postives = 130/179 (72.63%), Query Frame = 2 Query: 137 IGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAVV 673 + +IRAAIPKHCWVKNPW+S+SYV+R+ + N W WPLYW+AQGTMFWA+FVLGHDCGHGSFS P LNS VGH+LHSSILVPY+GWRISHRTHHQNHG+VE+DESW PM EKIY LD TR RF+ W RSPGK GSH++P S LF P ER V+ Sbjct: 56 LADIRAAIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYKSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVL 234
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.549e-67 Identity = 111/179 (62.01%), Postives = 131/179 (73.18%), Query Frame = 2 Query: 137 IGEIRAAIPKHCWVKNPWRSLSYVLRDXXXXXXXXXXXTHFNTWFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSSTRILRFSXXXXXXXXXXXXWYRSPGKDGSHFNPYSSLFSPGERKAVV 673 + +IRAAIPKHCWVKNPW S+SYV+RD +FN W WPLYW AQGTMFWA+FVLGHDCGHGSFS P LNS GH+LHSSILVPY+GWRISHRTHHQNHG+VE+DESW P+PE IY L+ +T++ RF+ W RSPGK GSH++P S LF P E+K V+ Sbjct: 91 LADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVL 269 The following BLAST results are available for this feature:
BLAST of CK936044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936044 ID=CK936044; Name=CK936044; organism=Citrus sinensis; type=EST; length=673bpback to top |