CK936052

Overview
NameCK936052
Unique NameCK936052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936052 vs. ExPASy Swiss-Prot
Match: FAAA_HUMAN (Fumarylacetoacetase OS=Homo sapiens GN=FAH PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.041e-21
Identity = 45/71 (63.38%), Postives = 58/71 (81.69%), Query Frame = 2
Query:    5 LLGTVTISGPEPESLGCLLELTWKGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGDGYTVGFGTCSGKIVPS 214
            LL + TISGPEPE+ G +LEL+WKG KP+ L +G TRKFL DGDEV  TG+C+GDGY +GFG C+GK++P+
Sbjct:  345 LLASGTISGPEPENFGSMLELSWKGTKPIDLGNGQTRKFLLDGDEVIITGYCQGDGYRIGFGQCAGKVLPA 415          
BLAST of CK936052 vs. ExPASy Swiss-Prot
Match: FAAA_BOVIN (Fumarylacetoacetase OS=Bos taurus GN=FAH PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.775e-21
Identity = 45/71 (63.38%), Postives = 57/71 (80.28%), Query Frame = 2
Query:    5 LLGTVTISGPEPESLGCLLELTWKGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGDGYTVGFGTCSGKIVPS 214
            LL + TISGPEPES GC+LEL+WKG + + L +G TRKFL DGDEV  TG C+GDGY +GFG C+GK++P+
Sbjct:  345 LLASGTISGPEPESFGCMLELSWKGTRAVELGNGQTRKFLLDGDEVIMTGHCQGDGYRIGFGQCAGKVLPA 415          
BLAST of CK936052 vs. ExPASy Swiss-Prot
Match: FAAA_RAT (Fumarylacetoacetase OS=Rattus norvegicus GN=Fah PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.011e-18
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 2
Query:    5 LLGTVTISGPEPESLGCLLELTWKGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGDGYTVGFGTCSGKIVPS 214
            LL + TISG +PES G +LEL+WKG K + +  G TR FL DGDEV  TG C+GDGY VGFG C+GK++P+
Sbjct:  345 LLASGTISGSDPESFGSMLELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPA 415          
BLAST of CK936052 vs. ExPASy Swiss-Prot
Match: FAAA_MOUSE (Fumarylacetoacetase OS=Mus musculus GN=Fah PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.011e-18
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 2
Query:    5 LLGTVTISGPEPESLGCLLELTWKGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGDGYTVGFGTCSGKIVPS 214
            LL + TISG +PES G +LEL+WKG K + +  G TR FL DGDEV  TG C+GDGY VGFG C+GK++P+
Sbjct:  345 LLASGTISGSDPESFGSMLELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPA 415          
BLAST of CK936052 vs. ExPASy Swiss-Prot
Match: FAAA_DICDI (Fumarylacetoacetase OS=Dictyostelium discoideum GN=fah PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.935e-17
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 2
Query:    5 LLGTVTISGPEPESLGCLLELTWKGQKPLSLDGFT---RKFLEDGDEVTFTGFCKGDGYTVGFGTCSGKIVPS 214
            LLGT TISGP  +S G +LEL+WKG K +SL   T   RKF++DGD V  +G CKG+GY +GFG C G I+P+
Sbjct:  351 LLGTGTISGPTEDSYGSMLELSWKGSKVVSLGTETNEERKFIQDGDSVILSGLCKGNGYQIGFGNCEGTILPA 423          
The following BLAST results are available for this feature:
BLAST of CK936052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FAAA_HUMAN3.041e-2163.38Fumarylacetoacetase OS=Homo sapiens GN=FAH PE=1 SV... [more]
FAAA_BOVIN6.775e-2163.38Fumarylacetoacetase OS=Bos taurus GN=FAH PE=2 SV=1[more]
FAAA_RAT7.011e-1859.15Fumarylacetoacetase OS=Rattus norvegicus GN=Fah PE... [more]
FAAA_MOUSE7.011e-1859.15Fumarylacetoacetase OS=Mus musculus GN=Fah PE=1 SV... [more]
FAAA_DICDI5.935e-1756.16Fumarylacetoacetase OS=Dictyostelium discoideum GN... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004387_E08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936052 ID=CK936052; Name=CK936052; organism=Citrus sinensis; type=EST; length=534bp
GGGTCTGCTTGGAACAGTTACCATCAGTGGACCTGAGCCAGAATCTCTTG
GATGCTTGCTGGAGTTAACATGGAAGGGACAAAAGCCGCTTTCACTAGAT
GGGTTTACTCGTAAATTCCTGGAAGATGGAGATGAAGTGACATTTACTGG
TTTTTGCAAGGGAGACGGTTACACTGTTGGATTTGGAACGTGTTCAGGAA
AAATAGTCCCATCAACCCCTTAGTGAAGCAACCACCCTTGGTGATCAAAG
CGAGTGTCTGCCCATCTGATGAAATCAATTAGAGTGGTTGTGTTTACATT
GAATCCGCATCTGGTCAGGTCCATGTGTAATAGATCTAATTGAATTTGTA
GCTAACAAGACCGCGAAATGAAGACCTGAAGATGGGACGATTGAAAAAAG
TGCATGTGATGAGAGTATTGAACTAAATGAAGTGAAAATCTTCTTTTCTT
TTCAGTTTATAATTTTTTATTTGGATCTCAATTCTTGGACGCCATATATT
TCATTTGAATGTTTGAATCAATTGAAGATTAGTA
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