CK936085

Overview
NameCK936085
Unique NameCK936085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.177e-48
Identity = 92/116 (79.31%), Postives = 105/116 (90.52%), Query Frame = 2
Query:  344 MATADPLRPRYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVAL 691
            + T + LRPR+YSETCPEAESIV   + KAMI+E RS ASVMRFQFHDCFVNGCDAS+LLDDTP MLGEKLSLSNI+SLRS+EV+D++KEALEKACP TVSCADI+IMA+RDAVAL
Sbjct:   17 VVTGETLRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVAL 132          
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30
Identity = 60/107 (56.07%), Postives = 81/107 (75.70%), Query Frame = 2
Query:  374 YYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALV 694
            +Y E+CP    +V  V+ +A+ REPR GAS++R  FHDCFVNGCD S+LLDDTP+ LGEK S  + NS+R +EVID++K  +EK CPG VSCADI+ + +RD+V L+
Sbjct:   25 FYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLL 131          
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 8.630e-30
Identity = 59/105 (56.19%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  377 YSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVAL 691
            Y  +CPEAESIV   +   ++ +PR  AS++R  FHDCFVNGCDAS+LLDDT  ++GEK +  N+NSLR +EVID +K  +E  CP TVSCADI+ MA+RD+V +
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVV 159          
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 56/110 (50.91%), Postives = 78/110 (70.91%), Query Frame = 2
Query:  362 LRPRYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVAL 691
            L P++Y  +CP A++IV   +  A   +PR  AS++R  FHDCFVNGCDAS+LLD + TM  EK S +N +S R +EVIDE+K ALE  CP TVSCAD++ + +RD++ +
Sbjct:   41 LSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVI 150          
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29
Identity = 59/110 (53.64%), Postives = 82/110 (74.55%), Query Frame = 2
Query:  362 LRPRYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVAL 691
            L P++Y  +CP+A+ IV  V+ KA+ +EPR  AS++R  FHDCFV GCDAS+LLDD+ T+  EK +  N NS+R ++VIDE+K  LE+ACP TVSCADI+ +A+R +  L
Sbjct:   45 LYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTIL 154          
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29
Identity = 62/112 (55.36%), Postives = 82/112 (73.21%), Query Frame = 2
Query:  356 DPLRPRYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVAL 691
            +PL   +Y E+CP AE IV   I  A++++PR  AS++R QFHDCFV GCDAS+LLD    ML EK +  N+NSLR +EVID +K  LE+ACP TVSC+DI+ +A+RD+V L
Sbjct:   28 EPLLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFL 139          
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28
Identity = 56/110 (50.91%), Postives = 81/110 (73.64%), Query Frame = 2
Query:  362 LRPRYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVAL 691
            L P++Y ++CP+A+ IV  ++ KA   +PR  AS++R  FHDCFV GCDAS+LLD + T++ EK S  N NS R +E+I+E+K ALE+ CP TVSCADI+ +A+RD+  +
Sbjct:   33 LFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVI 142          
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28
Identity = 55/110 (50.00%), Postives = 81/110 (73.64%), Query Frame = 2
Query:  362 LRPRYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVAL 691
            L P +Y +TCP+   IV + I+ A+  +PR  AS++R  FHDCFVNGCDAS+LLD+T +   EK +  N NS R ++VID++K A+EKACP TVSCAD++ +A+++++ L
Sbjct:   24 LSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVL 133          
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28
Identity = 63/109 (57.80%), Postives = 79/109 (72.48%), Query Frame = 2
Query:  359 PLRPRYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTP-TMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDA 682
            PL   YY  TCP+AE+IV   + KA+ + P +GA+V+R  FHDCFV GCDAS+LLD TP +   EKL+  N  SLR +E+ID +K+ALE ACPG VSCADII  A+RDA
Sbjct:   34 PLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 142          
BLAST of CK936085 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.077e-28
Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 2
Query:  362 LRPRYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALV 694
            LR  +YS++CP     V  V+ + + +E R  AS++R  FHDCFVNGCDAS+LLDDT + LGEK +  N NS+R YEVID +K  +E+ CPG VSCADI+ + +RD+V L+
Sbjct:   30 LRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLM 140          
The following BLAST results are available for this feature:
BLAST of CK936085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
PER17_ARATH9.177e-4879.31Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER67_ARATH3.874e-3056.07Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER40_ARATH8.630e-3056.19Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER36_ARATH7.305e-2950.91Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER9_ARATH9.541e-2953.64Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER20_ARATH9.541e-2955.36Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER72_ARATH1.246e-2850.91Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER38_ARATH4.735e-2850.00Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER2_MAIZE6.184e-2857.80Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER68_ARATH8.077e-2852.25Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_A08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936085 ID=CK936085; Name=CK936085; organism=Citrus sinensis; type=EST; length=729bp
GGGGATCCAAAATTGGTTTCTGTCAGTTAAACATCCTTCTCAATTACTCT
CAAGCAAATTGGCCCTCTCCTTGCCTCCTCTTGTCATAACAAGAATGCCC
TGTACATTGTTGACACCAATTCACTAAACTTAAAAACAGAATCCAATCCC
TCTCTCCATTCACAATCACACACAGCCAAAGAAATTAAAACAGCCTGACA
CTCGTAAGCCAAACCGCCCCACTTCATATTTACTTATAAACTCAACAAAA
TACTCATTTTGGACCTCACCCACTTCATTTTGCTTATTTTGCAAGCCCAA
GAAGATGTCGTTTTCGATACTATTCTTCCTTCTACTAATAACCATGGCAA
CTGCAGACCCTCTCCGGCCTCGATACTACTCGGAGACCTGCCCGGAAGCA
GAATCCATCGTCGGAGATGTGATTATGAAGGCCATGATTAGAGAACCAAG
AAGCGGAGCCTCTGTCATGCGGTTCCAGTTCCATGATTGCTTCGTTAATG
GTTGTGATGCTTCTATGTTGCTTGATGACACACCAACGATGCTTGGAGAA
AAATTGTCTCTTTCGAACATTAATTCGCTGAGATCATACGAAGTCATCGA
TGAGGTCAAAGAAGCATTAGAGAAAGCCTGTCCAGGAACCGTTTCTTGTG
CTGATATCATTATCATGGCCTCAAGAGATGCCGTTGCACTGGTAACCCCT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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