CK936087

Overview
NameCK936087
Unique NameCK936087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 2.941e-63
Identity = 124/178 (69.66%), Postives = 136/178 (76.40%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            +AFG FDDSFSL S +AYLAEFISTLLFVFAGVGSAIA+ K+T+DAALD  GLVAIA+CH            NISGGHVNPAVTFGLA+GGQIT++TG+FYWIAQLLGS  A FLLK VTGGLAVPTH+                 TF LVYTVYATAADPKKGSLGTI P+AIG IV
Sbjct:    4 VAFGSFDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIV 181
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.046e-60
Identity = 122/178 (68.54%), Postives = 132/178 (74.16%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            IAFG   DSFS+GS KAY+AEFI+TLLFVFAGVGSAIA+NK+TADAALDP+GLVA+A+ H            NISGGH+NPAVT GLA+GG ITILTG FYWIAQLLGS VA  LLK VT GLAVPTH                  TF LVYTVYATAADPKKGSLGTI PIAIG IV
Sbjct:    4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIV 181
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.046e-60
Identity = 122/178 (68.54%), Postives = 132/178 (74.16%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            IAFG   DSFS+GS KAY+AEFI+TLLFVFAGVGSAIA+NK+TADAALDP+GLVA+A+ H            NISGGH+NPAVT GLA+GG ITILTG FYWIAQLLGS VA  LLK VT GLAVPTH                  TF LVYTVYATAADPKKGSLGTI PIAIG IV
Sbjct:    4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIV 181
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.670e-58
Identity = 120/178 (67.42%), Postives = 133/178 (74.72%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            IAFGRFDDSFS  S KAY+AEFISTL+FVFAGVGSAIA+ K+T  A LDP+GLVA+A+CH            NISGGHVNPAVTFGLALGGQITILTG+FYWIAQLLG+IV + L++  T G+A PTH                  TFGLVYTVYATAADPKKGSLGTI PIAIG IV
Sbjct:    5 IAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHG-LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIV 180
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.849e-58
Identity = 116/178 (65.17%), Postives = 130/178 (73.03%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            IAFG   DSFS+ S KAY+AEFI+TLLFVFAGVGSAIA+NK+T+DAALDP+GLVA+A+ H            N+SGGH+NPAVT GLA+GG ITILTG+FYWIAQ LGS VA  LLK VT GL+VPTH                  TF LVYTVYATAADPKKGSLG I PIAIG IV
Sbjct:    4 IAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIV 181
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 3.850e-55
Identity = 112/178 (62.92%), Postives = 126/178 (70.79%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            I  G   DSFS+ S KAYL+EFI+TLLFVFAGVGSA+AF K+T+DAALDP+GLVA+A+ H            NISGGH+NPAVT GLA+GG IT++TG FYWIAQ LGSIVA  LL  VT G +VPTH                  TF LVYTVYATAADPKKGSLGTI PIAIG IV
Sbjct:    4 IEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIV 181
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.028e-55
Identity = 113/178 (63.48%), Postives = 125/178 (70.22%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            I  G   DSFS+ S KAYL+EFI+TLLFVFAGVGSA+AF K+T+D ALDP+GLVAIAI H            NISGGH+NPAVT GLA+GG IT++TG FYWIAQ LGSIVA  LL  VT G +VPTH                  TF LVYTVYATAADPKKGSLGTI PIAIG IV
Sbjct:    4 IEVGSVGDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIV 181
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.028e-55
Identity = 111/178 (62.36%), Postives = 127/178 (71.35%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            +AFG   DSFS+ S KAY+AEFI+TLLFVFAGVGSAIAF ++T   ALDP+GLVAIA+ H            N SGGH+NPAVTFGLA+GG IT+LTG+FYW+AQLLG+ VA  LL+ VT G A+PTH                  TF LVYTVYATAADPKKGSLGTI PIAIG IV
Sbjct:    4 LAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIV 181
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.495e-54
Identity = 114/178 (64.04%), Postives = 127/178 (71.35%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            +AFG   DSFS  S KAY+AEFI+TLLFVFAGVGSAIA+ ++T   ALDP+GLVAIAI H            NISGGH+NPAVTFGLA+GG ITILTG+FYWIAQLLG+ +A  LLK VT G A+PTH                  TF LVYTVYATAADPKKGSLGTI PIAIG IV
Sbjct:    4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHG-VAGISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIV 180
[Close]
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 3.259e-54
Identity = 113/178 (63.48%), Postives = 128/178 (71.91%), Query Frame = 3 
Query:   48 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            +AFG F DS S  S KAY+AEFI+TLLFVFAGVGSAIA++++T   ALDP+GLVAIAI H            NISGGH+NPAVTFGLA+GG ITILTGI YW+AQLLG+ VA FLL+ VT G A+PTH                  TF LVYTVYATAADPKKGSLGTI P+AIG IV
Sbjct:    4 LAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHG-VSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIV 180
The following BLAST results are available for this feature:
BLAST of CK936087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
TIP21_ARATH2.941e-6369.66Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP2_TOBAC1.046e-6068.54Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC1.046e-6068.54Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP22_ORYSJ1.670e-5867.42Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP_ANTMA2.849e-5865.17Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP22_ARATH3.850e-5562.92Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP23_ARATH5.028e-5563.48Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP22_MAIZE5.028e-5562.36Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP21_ORYSJ2.495e-5464.04Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP23_MAIZE3.259e-5463.48Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_A10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936087 ID=CK936087; Name=CK936087; organism=Citrus sinensis; type=EST; length=581bp
TTTTTTTTTTTTCCTATTCTCTAGCTCTTTCTTGATCAACAATGGCTATT
GCCTTCGGCCGCTTCGATGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTA
TCTTGCTGAGTTTATCTCAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCT
CGGCCATTGCTTTCAACAAGGTGACAGCAGATGCAGCACTTGATCCATCA
GGGCTAGTAGCCATAGCTATTTGCCATGGATTTGCTCTATTTGTCGCTGT
TGCAGTTGGTGCTAACATCTCAGGTGGCCACGTCAACCCAGCCGTCACCT
TTGGATTGGCTCTTGGTGGCCAAATCACCATCCTCACTGGCATCTTCTAC
TGGATTGCCCAACTTCTTGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGT
TGTCACTGGAGGATTGGCAGTTCCTACCCACAATGTTGCTGCTGGAGTTG
GAGCCATTGAAGGAGTTGTGATGGAGATCATCATCACATTTGGTTTGGTC
TACACGGTCTATGCCACGGCAGCTGACCCGAAGAAGGGATCATTGGGCAC
CATTNCACCCATTGCCATTGGTNNNATTGTC
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