CK936127

Overview
NameCK936127
Unique NameCK936127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK936127 vs. ExPASy Swiss-Prot
Match: LEA14_SOYBN (Desiccation protectant protein Lea14 homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 36/137 (26.28%), Postives = 66/137 (48.18%), Query Frame = 2 
Query:  221 EETIGFGKPTADVTAVHIPKINLERADIVIDVXXXXXXXXXXXXXXXXXXVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 631
            E+     KP A VT V   +++ +  + +  V                  ++S G+++ SG IPD G++ A     + +PV + +  + +   DI     I Y++ + L++D+PV G  T+PL + GEI +P   D+
Sbjct:   14 EKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEIKYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDLGLVIDLPVIGNFTIPLSQKGEIKLPTLSDM 150
The following BLAST results are available for this feature:
BLAST of CK936127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEA14_SOYBN9.206e-1126.28Desiccation protectant protein Lea14 homolog OS=Gl... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004386_F02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IVF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936127 ID=CK936127; Name=CK936127; organism=Citrus sinensis; type=EST; length=870bp
GGGGGTAAATAGTGGCCTTGCTCTTCGTGGTTGCTGTCTTGAACTCATCA
GATCTCTTTCAAAACTTCATCAACTGTCAGGTATGGCATCATCTGATAAG
CCGGAAGTAGTTGAAAGGGATGTTAAGGAGAAAGGGCACAAGGAGGATGA
CAAAGAAGAGGGAAAAGGTGGATTTATCGAAAAAGTCAAGGATTTTATCC
ATGATATTGGTGAAAAGATTGAGGAAACAATTGGATTTGGGAAGCCAACT
GCTGATGTTACTGCAGTTCACATTCCTAAAATTAATCTTGAAAGGGCAGA
TATTGTTATTGACGTGCTCATTAAAAACCCGAATCCTATACCGATCCCTC
TAATTGACATAAACTACTTGGTTGAGAGTGATGGAAGGAAATTGGTTTCT
GGTTTGATCCCAGATTCTGGAACTATTCATGCACATGGCGAGGAGACTGT
CAAAATCCCTGTTACTCTGATTTATGATGACATTAAAAATGCATATGATG
ATATCAAGCCTGGGATGATTATTCCATATAAGATCAAGGTTGACCTGATT
GTAGATGTGCCGGTTTTTGGAAGGTTGACTCTTCCACTTGAGAAAAATGG
AGAGATCCCCATTCCTTACAAGCCCGATATTGATCTCGAGAAGATTAAGT
TTGAGAGATTCTCATTTGAAGAAACTGTTGCAATTCTTCATTTGAAGTTG
GAAAATAAGAACGACTTTGACTTGGCCCTGAATTCACTTGATTATGAAGT
TTGGCTATCAGATGCGAGCATTGGAGCTGCTGAACTCACAAAATCTGCCA
AAATTGACAAGAATGGGATTAGCTATATTGATATTCCTATCACCTTTAGG
CCCAAGGACTTTGGCTCCGC
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