CK936228

Overview
NameCK936228
Unique NameCK936228
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 326.25 bits (835), Expect = 1.317e-88
Identity = 141/195 (72.31%), Postives = 160/195 (82.05%), Query Frame = 2
Query:  131 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKV 715
            F+I NNCP TVWAAAVPGGG++LD+GQ W I    GTK AR+W RT C FD +G+GKC+TGDCNGLL+CQ +G  PNTLAEYAL QFN +DF D+S +DGFNV MEFS  S  C R IKCTA+I G+CPNEL+ PGGCN PC VFKTD+YCCNSGNCG T FSKFFKDRCPD YSYPKDD TSTFTCP+GT+YKV
Sbjct:   27 FNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKV 221          
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 5.017e-80
Identity = 129/197 (65.48%), Postives = 154/197 (78.17%), Query Frame = 2
Query:  128 KFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKV 715
            +F+ITN C  TVWAA+VP GGG QL+ GQ+W++    GTK AR+WART C FD SG+G C+TGDC G+L+C+ YGA PNTLAEY L  FN +DF D+S +DGFNVPM+FS  S  C R I CTA+I G+CP+ELK  GGCN PC VFKTD+YCCNSG+CGPT +S+FFK RCPD YSYPKDD  STFTC  GTDY+V
Sbjct:    2 RFEITNRCTYTVWAASVPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRV 198          
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.511e-76
Identity = 129/197 (65.48%), Postives = 152/197 (77.16%), Query Frame = 2
Query:  131 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKV 715
            FDI N C  TVWAAA PGGGR+LD GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG APNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+EYCC +  G+CGPT  S+FFK+RCPD YSYP+DD TS FTCPSGT+Y+V
Sbjct:   28 FDIVNKCTYTVWAAASPGGGRRLDSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRV 222          
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 5.740e-76
Identity = 126/198 (63.64%), Postives = 152/198 (76.77%), Query Frame = 2
Query:  134 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKV 715
            ++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK AR+W RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+G+DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP EL+VPGGCN PC  F   +YCC  G CGPT FSKFFK RCPD YSYP+DD TSTFTCP G T+Y+V
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRV 222          
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.849e-75
Identity = 125/199 (62.81%), Postives = 149/199 (74.87%), Query Frame = 2
Query:  131 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKV 715
            F++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK ARIW RT C FD  G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+ +DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCPSG T+Y+V
Sbjct:   16 FEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRV 214          
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.083e-74
Identity = 126/198 (63.64%), Postives = 149/198 (75.25%), Query Frame = 2
Query:  134 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKV 715
            ++ NNCP TVWAA+ P GGGR+L+KGQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+ +DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCPSG T+Y+V
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLNKGQTWVINAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRV 222          
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.083e-74
Identity = 124/198 (62.63%), Postives = 149/198 (75.25%), Query Frame = 2
Query:  134 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKV 715
            ++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK ARIW RT C FD +G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+ +DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCPSG T+Y+V
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRV 222          
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 278.87 bits (712), Expect = 2.412e-74
Identity = 122/197 (61.93%), Postives = 155/197 (78.68%), Query Frame = 2
Query:  131 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKV 715
            F+I N C  TVWAAA PGGGR+LD GQ+W +  A GTK ARIW RT C FD+SG+G+C+TGDC+G L+C G+G  PNTLAEYAL QFN +DF D+S +DGFN+PMEFS  S +C+R++ CTA+I G+CPN L+ PGGCN PC VF+T++YCC +  G+C  T +S+FFK RCPD YSYP+DD TSTFTC + T+Y+V
Sbjct:   25 FEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTC-TNTNYRV 219          
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 7.017e-74
Identity = 127/200 (63.50%), Postives = 152/200 (76.00%), Query Frame = 2
Query:  131 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKV 715
            F + N CP TVWAA+VP GGGRQL++G++W ITA  GT AARIWART C+FDASG+G C TGDC G+L+C GYG APNTLAEYALKQFN +DF D+S IDGFNVPM F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + +C PT +S++FK +CPD YSYPKDDATSTFTCP+GT+YKV
Sbjct:   24 FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKV 223          
BLAST of CK936228 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.197e-73
Identity = 125/197 (63.45%), Postives = 148/197 (75.13%), Query Frame = 2
Query:  131 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNGMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKV 715
            FDI N C  TVWAAA PGGGRQL+ GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+E+CC +  G+CGPT  S+FFK RCPD YSYP+DD  S FTCP GT+Y+V
Sbjct:   28 FDIVNQCTYTVWAAASPGGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRV 222          
The following BLAST results are available for this feature:
BLAST of CK936228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_ACTDE1.317e-8872.31Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN5.017e-8065.48Protein P21 OS=Glycine max PE=1 SV=1[more]
PRR1_TOBAC1.511e-7665.48Pathogenesis-related protein R major form OS=Nicot... [more]
OSMO_TOBAC5.740e-7663.64Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
TPM1_SOLLC2.849e-7562.81Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OS81_SOLCO1.083e-7463.64Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
OS13_SOLCO1.083e-7462.63Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
OSL3_ARATH2.412e-7461.93Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
ZEAM_MAIZE7.017e-7463.50Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
PRR2_TOBAC1.197e-7363.45Pathogenesis-related protein R minor form OS=Nicot... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004385_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IIIF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936228 ID=CK936228; Name=CK936228; organism=Citrus sinensis; type=EST; length=822bp
GGGAAAACATAAACCAAACTTATCTATTTTCATATTCATTATCCGCTCCA
AAATGAGATTCATTAAAGCTCTTCCCATTTCCTCTGCTCTTCTTATTATC
ATTTCCATCACCCTGACTCATGCTGCCAAATTCGATATCACAAACAATTG
CCCCGACACCGTCTGGGCCGCCGCTGTGCCCGGAGGCGGCAGGCAACTCG
ACAAGGGTCAAACATGGACCATCACCGCCGCGCCAGGCACAAAAGCAGCC
CGCATTTGGGCTCGAACCAAATGCCAGTTTGATGCTTCCGGCAAAGGCAA
ATGCGAGACCGGTGACTGTAACGGACTCCTCGAGTGCCAAGGCTACGGTG
CAGCACCTAACACCTTGGCCGAGTACGCGTTGAAGCAATTCAATGGCATG
GATTTCATTGACATGTCCAACATTGACGGATTCAATGTTCCCATGGAATT
TAGCTCTGTCTCTCCCTCATGCAACCGCGTGATCAAGTGCACTGCTAACA
TTCTTGGCGAGTGCCCTAATGAATTGAAGGTTCCTGGAGGATGTAACGGG
CCGTGCCCCGTGTTCAAGACCGACGAGTACTGTTGCAATTCAGGCAACTG
CGGACCTACAGGTTTCTCCAAGTTTTTCAAGGATAGGTGCCCGGATGTTT
ACAGTTACCCTAAGGATGACGCTACCAGCACATTTACTTGCCCGAGTGGG
ACCGACTACAAGGTAGAAATGGAAATAGAAAACTATACGACGCAGTCTTC
TGTATTTGTTATAATATTGGAATAAGGACCGTGCGGTCTTCACTGCCATA
GAGCTGGAGCAGGCACATGTAG
back to top