CK936277

Overview
NameCK936277
Unique NameCK936277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK936277 vs. ExPASy Swiss-Prot
Match: USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 33/95 (34.74%), Postives = 55/95 (57.89%), Query Frame = 1 
Query:  262 APPDLLMSIQENQKEAALALLGRAKEICAKHGVVAETMTEMGDPKIVICEAAEKHKIQLLIVGSHSRGPIQRAFLGSVSNYCVHNAKCPVLVVRK 546
            A P+    ++++ K   L LL      C + GV  E   + GDPK VIC+  ++ +   L+VGS   G  Q+ F+G+VS +CV +A+CPV+ +++
Sbjct:   69 ASPEDFRDMRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKR 163
The following BLAST results are available for this feature:
BLAST of CK936277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
USPAL_ARATH4.856e-1134.74Universal stress protein A-like protein OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004384_F02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IIF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936277 ID=CK936277; Name=CK936277; organism=Citrus sinensis; type=EST; length=812bp
GGGGACCCCACGATCGAACCAGAAGTATTTGGCTCTGAAACCCAAAATTC
CTAAAGAAAGACCAAAGGAAGAAAAGGAAGAGAGTAAAAAGAGATGGACA
AGAAGAAAGTGATGGTGGCTATAGATGAGAGTGAGTGTCGCCACTATGCT
CTCCAATGGGCACTTGAAAATCTAGGCGATGCGATATCCAAGTCTGACCT
TATCATCTTCACTGCTCGGCCTACTGAATTTATTTATGTTCAGGCTTCCA
TGTTTGGTGCTGCTCCACCAGACTTGCTTATGTCCATACAAGAAAATCAA
AAGGAGGCTGCATTGGCTCTATTGGGAAGAGCAAAGGAGATTTGTGCTAA
GCATGGGGTTGTTGCAGAGACAATGACAGAGATGGGGGATCCTAAAATTG
TCATATGCGAAGCAGCAGAAAAGCACAAAATCCAGTTACTTATAGTAGGT
AGCCATAGCCGTGGACCTATACAGAGGGCTTTTCTGGGAAGTGTTAGCAA
TTACTGTGTTCATAATGCCAAGTGCCCTGTGCTTGTGGTGAGGAAGCCAG
TTGAATGAATGCACTCGAGCAAGATATAAGAAACTGAATCTTCAGCTGTA
ACCTAGAGGGAATAAAAAACGGAGTTAAGCGGTCATTACCAACTTGGCCT
AATGAAGGTGAAATTAATTATTTGTTCAAATGTAGTTTGATGTTGTGGAA
AAATGAGTGTTGTATAAAGATGTGGAGTTTGTAACTTTATAAATAAAGTG
GATGAAGTAAGTTAAGGTGGCTTCCGTTTAATAAAAAAAAAAAAAAAAAA
AAAAAAAANNAA
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