EY714340

Overview
NameEY714340
Unique NameEY714340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY714340 vs. ExPASy Swiss-Prot
Match: ENVZ_SALTY (Osmolarity sensor protein envZ OS=Salmonella typhimurium GN=envZ PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.770e-23
Identity = 86/294 (29.25%), Postives = 145/294 (49.32%), Query Frame = -1
Query:    4 PQSFFSRTLWLVLIVVLFPKALTLVYLLMNEDVLVD-RQYSHGVALTLRAYWA------------ADPENREKIAKAATLVRVAGAGVPEGEQHWP-YSEIYQRQMQAELGEDTEVRLRMHVS-PALWVRAPSLGEDWLKVPLYPHPLRGQKIWNVLGWFLAIGLLSTASAWIFVRQLNQPLKRLVFAARQLGQGRSVRLPISDT-PSEMTEVYSAFNQMAEDVEQAGRERELMLAGVSHDXXXXXXXXXXXXXLMGNHTD-LTDDMVRDIEDMDAILDQFLAFIRDGSDEVVE 834
            P+S F+RTL L+++ +LF   +T   +++N  +L   +Q++  +A  +R                  P  R +I +   +         E    W  + E    QM  +LG  TEVR+ ++ S P +W++       W++VPL    +       +  + LAI LL+   AW+F+R  N+PL  L  AA Q+G+G  +  P+ +   SE+  V  AFN MA  V+Q   +R L++AGVSHD             +MG     L + + +DIE+ +AI++QF+ ++R G +  +E
Sbjct:    8 PRSSFARTL-LLIVTLLFVSLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYTNEAAEEAGLRWAQHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTE--IHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKG-IIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMGEEDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPME 297          
BLAST of EY714340 vs. ExPASy Swiss-Prot
Match: ENVZ_SALTI (Osmolarity sensor protein envZ OS=Salmonella typhi GN=envZ PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.770e-23
Identity = 86/294 (29.25%), Postives = 145/294 (49.32%), Query Frame = -1
Query:    4 PQSFFSRTLWLVLIVVLFPKALTLVYLLMNEDVLVD-RQYSHGVALTLRAYWA------------ADPENREKIAKAATLVRVAGAGVPEGEQHWP-YSEIYQRQMQAELGEDTEVRLRMHVS-PALWVRAPSLGEDWLKVPLYPHPLRGQKIWNVLGWFLAIGLLSTASAWIFVRQLNQPLKRLVFAARQLGQGRSVRLPISDT-PSEMTEVYSAFNQMAEDVEQAGRERELMLAGVSHDXXXXXXXXXXXXXLMGNHTD-LTDDMVRDIEDMDAILDQFLAFIRDGSDEVVE 834
            P+S F+RTL L+++ +LF   +T   +++N  +L   +Q++  +A  +R                  P  R +I +   +         E    W  + E    QM  +LG  TEVR+ ++ S P +W++       W++VPL    +       +  + LAI LL+   AW+F+R  N+PL  L  AA Q+G+G  +  P+ +   SE+  V  AFN MA  V+Q   +R L++AGVSHD             +MG     L + + +DIE+ +AI++QF+ ++R G +  +E
Sbjct:    8 PRSSFARTL-LLIVTLLFVSLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYTNEAAEEAGLRWAQHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTE--IHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKG-IIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMGEEDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPME 297          
BLAST of EY714340 vs. ExPASy Swiss-Prot
Match: ENVZ_SHIFL (Osmolarity sensor protein envZ OS=Shigella flexneri GN=envZ PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.097e-22
Identity = 85/294 (28.91%), Postives = 145/294 (49.32%), Query Frame = -1
Query:    4 PQSFFSRTLWLVLIVVLFPKALTLVYLLMNEDVLVD-RQYSHGVALTLRAYWA------------ADPENREKIAKAATLVRVAGAGVPEGEQHWP-YSEIYQRQMQAELGEDTEVRLRMHVS-PALWVRAPSLGEDWLKVPLYPHPLRGQKIWNVLGWFLAIGLLSTASAWIFVRQLNQPLKRLVFAARQLGQGRSVRLPISDT-PSEMTEVYSAFNQMAEDVEQAGRERELMLAGVSHDXXXXXXXXXXXXXLMGNHTD-LTDDMVRDIEDMDAILDQFLAFIRDGSDEVVE 834
            P+S F+RTL L+++ +LF   +T   +++N  +L   +Q++  +A  +R                  P  R +I +   +   +     E    W  + E    QM  +LG  TEVR+ ++ S P +W++       W++VPL    +       +  + LAI LL+   AW+F+R  N+PL  L  AA Q+G+G  +  P+ +   SE+  V  AFN MA  V+Q   +R L++AGVSHD             +M      L + + +DIE+ +AI++QF+ ++R G +  +E
Sbjct:    8 PRSSFARTL-LLIVTLLFASLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWAQHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTE--IHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKG-IIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPME 297          
BLAST of EY714340 vs. ExPASy Swiss-Prot
Match: ENVZ_ECOLI (Osmolarity sensor protein envZ OS=Escherichia coli (strain K12) GN=envZ PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.097e-22
Identity = 85/294 (28.91%), Postives = 145/294 (49.32%), Query Frame = -1
Query:    4 PQSFFSRTLWLVLIVVLFPKALTLVYLLMNEDVLVD-RQYSHGVALTLRAYWA------------ADPENREKIAKAATLVRVAGAGVPEGEQHWP-YSEIYQRQMQAELGEDTEVRLRMHVS-PALWVRAPSLGEDWLKVPLYPHPLRGQKIWNVLGWFLAIGLLSTASAWIFVRQLNQPLKRLVFAARQLGQGRSVRLPISDT-PSEMTEVYSAFNQMAEDVEQAGRERELMLAGVSHDXXXXXXXXXXXXXLMGNHTD-LTDDMVRDIEDMDAILDQFLAFIRDGSDEVVE 834
            P+S F+RTL L+++ +LF   +T   +++N  +L   +Q++  +A  +R                  P  R +I +   +   +     E    W  + E    QM  +LG  TEVR+ ++ S P +W++       W++VPL    +       +  + LAI LL+   AW+F+R  N+PL  L  AA Q+G+G  +  P+ +   SE+  V  AFN MA  V+Q   +R L++AGVSHD             +M      L + + +DIE+ +AI++QF+ ++R G +  +E
Sbjct:    8 PRSSFARTL-LLIVTLLFASLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWAQHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTE--IHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKG-IIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPME 297          
The following BLAST results are available for this feature:
BLAST of EY714340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ENVZ_SALTY3.770e-2329.25Osmolarity sensor protein envZ OS=Salmonella typhi... [more]
ENVZ_SALTI3.770e-2329.25Osmolarity sensor protein envZ OS=Salmonella typhi... [more]
ENVZ_SHIFL1.097e-2228.91Osmolarity sensor protein envZ OS=Shigella flexner... [more]
ENVZ_ECOLI1.097e-2228.91Osmolarity sensor protein envZ OS=Escherichia coli... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-041-C10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY714340 ID=EY714340; Name=EY714340; organism=Citrus sinensis; type=EST; length=891bp
CTCTTCCACCACCTCGTCGCTACCGTCGCGGATGAACGCGAGGAACTGGT
CGAGAATCGCGTCCATGTCCTCGATGTCTCGAACCATGTCGTCGGTAAGG
TCGGTGTGGTTGCCCATCAGTTCCAGGGAAAGCCGCAAACGCGTCAATGG
CGTGCGCAGGTCATGGGACACCCCCGCCAGCATCAGCTCGCGCTCGCGCC
CCGCCTGTTCGACATCCTCGGCCATCTGGTTGAACGCGCTGTACACCTCG
GTCATTTCACTCGGCGTGTCGCTGATGGGCAGCCGCACGCTACGGCCCTG
ACCAAGCTGGCGTGCCGCAAACACCAGGCGTTTGAGCGGCTGATTGAGCT
GGCGCACGAAAATCCAGGCAGACGCGGTGGAAAGCAAACCAATCGCCAGG
AACCAGCCCAACACGTTCCAGATCTTCTGCCCCCGCAATGGATGCGGATA
CAGCGGCACCTTCAGCCAGTCCTCGCCCAGGCTTGGGGCCCGCACCCAGA
GCGCCGGTGATACATGCATGCGTAGCCGCACCTCGGTGTCTTCACCCAGT
TCGGCCTGCATCTGGCGTTGGTAGATTTCGCTGTAGGGCCAATGTTGCTC
GCCCTCGGGCACACCCGCACCCGCGACCCGGACCAGGGTAGCGGCCTTGG
CGATCTTCTCGCGGTTCTCGGGGTCTGCGGCCCAGTAGGCGCGCAAGGTC
AGGGCGACACCGTGGCTGTACTGCCGGTCCACCAGCACGTCTTCGTTCAT
CAACAGATAAACCAGTGTCAGGGCCTTTGGAAACAGTACGACGATGAGCA
CCAGCCAAAGGGTGCGTGAGAAGAAACTTTGCGGAANCNNACACGGTTTT
CATAGAAGAAGCTAGACACTTGCAGGAGCGAGCGAGCTCGC
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