CF420816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 3.898e-52 Identity = 97/122 (79.51%), Postives = 103/122 (84.43%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 +KPVRELV DDAWLNGEFITTVQQRGAAIIKARK CDHI DWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC+NGEWTIVQGL ID+ SRKK+D TA EL +EK LAY Sbjct: 207 DKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAELVEEKTLAY 328
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 5.091e-52 Identity = 98/122 (80.33%), Postives = 106/122 (86.89%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 EKPVR+LV DDAWLNGEFI+TVQQRGAAIIKARK CDHIRDWVLGTP+GT+VSMGVYSDGSYNVP+GLIYSFPVTC NGEW IVQGLSIDEFSRKKLDLTA EL++EK LA+ Sbjct: 207 EKPVRQLVSDDAWLNGEFISTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEKNLAH 328
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 6.649e-52 Identity = 98/122 (80.33%), Postives = 105/122 (86.07%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 EKPVRELVK+D WLNGEFI+TVQQRGAAIIKARK CDHIRDWV+GTPEGT+VSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGL ID+ SRKK+DLTA EL +EK LAY Sbjct: 207 EKPVRELVKNDEWLNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAY 328
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 1.481e-51 Identity = 97/122 (79.51%), Postives = 106/122 (86.89%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 EKPVRELVKDDAWL+GEFI+TVQQRGAAIIKARK CDHIRDWVLGTPEGT+VSMGVYSDGSY+VP+GLIYSFPVTCRNG+W+IVQGL IDE SRKK+DLTA EL +EK LAY Sbjct: 207 EKPVRELVKDDAWLDGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEKDLAY 328
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 5.629e-51 Identity = 96/122 (78.69%), Postives = 102/122 (83.61%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 EK VRELV DDAWLNGEFITTVQQRGAAIIKARK CDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC++GEW IVQGL IDE SR+K+D T EL +EKALAY Sbjct: 207 EKAVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAELVEEKALAY 328
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 1.254e-50 Identity = 96/122 (78.69%), Postives = 101/122 (82.79%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 EKPVRELV DD WLNGEFITTVQQRGAAIIKARK CDHIRDWVLGTPEGT+VSMGVYSDGSY VP+GLIYSFPVTC GEW IVQGL IDEFSRKK+D TA EL++EK LAY Sbjct: 207 EKPVRELVSDDEWLNGEFITTVQQRGAAIIKARKFSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQELTEEKTLAY 328
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 197.593 bits (501), Expect = 1.638e-50 Identity = 97/122 (79.51%), Postives = 101/122 (82.79%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 EKPVRELV DD WLN EFI+TVQQRGAAIIKARK CDHIRDWVLGTPEGT+VSMGVYSDGSY VPAGLIYSFPVTC GEWTIVQGL IDEFSRKK+D TA ELS+EK LAY Sbjct: 207 EKPVRELVADDEWLNTEFISTVQQRGAAIIKARKQSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQELSEEKTLAY 328
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 146.747 bits (369), Expect = 3.315e-35 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 E V E VKDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG SY VP L+YSFPVT ++ W IV+GL I++FSR+K+DLTA EL++EK A+ Sbjct: 206 EVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEKETAF 328
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 7.386e-35 Identity = 71/123 (57.72%), Postives = 91/123 (73.98%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 E V + +KDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG+ Y VP L+YSFPVT +N W +V+GL+I++FSR+K+DLTA EL++EK A+ Sbjct: 206 EVGVYDALKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNPYGVPDDLLYSFPVTIKNKTWKVVEGLTINDFSREKMDLTAKELAEEKETAF 328
BLAST of CF420816 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 1.260e-34 Identity = 71/123 (57.72%), Postives = 90/123 (73.17%), Query Frame = 2 Query: 2 EKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAXELSQEKALAY 367 E V E +KDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG SY +P L+YSFPVT ++ W +V+GL I++FSR+K+DLTA EL++EK A+ Sbjct: 206 EVGVYEALKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGIPDDLLYSFPVTIKDKTWKVVEGLPINDFSREKMDLTAKELAEEKETAF 328 The following BLAST results are available for this feature:
BLAST of CF420816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
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Sequences
The
following sequences are available for this feature:
EST sequence >CF420816 ID=CF420816; Name=CF420816; organism=Citrus trifoliata; type=EST; length=367bpback to top |