CF420877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 4.908e-26 Identity = 64/101 (63.37%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*D--YYPVQALSSERSSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRD 324 MGLSFTKLFSRLFAKKEMRILMVGLDAA Y ++ + P + + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDRD Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT---IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRD 98
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.908e-26 Identity = 64/101 (63.37%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*D--YYPVQALSSERSSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRD 324 MGLSFTKLFSRLFAKKEMRILMVGLDAA Y ++ + P + + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDRD Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT---IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRD 98
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 4.908e-26 Identity = 65/100 (65.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*DYYPVQALSSER-SSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRD 324 MGLSFTKLFSRLFAKKEMRILMVGLDAA Q E ++ P + ++ + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDRD Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYQLKLGEIVTTIPTIGFNV--ETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRD 98
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.093e-25 Identity = 63/101 (62.38%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*D--YYPVQALSSERSSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRD 324 MGL+FTKLFSRLFAKKEMRILMVGLDAA Y ++ + P + + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDRD Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT---IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRD 98
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 1.865e-25 Identity = 63/101 (62.38%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*D--YYPVQALSSERSSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRD 324 MGLSF KLFSRLFAKKEMRILMVGLDAA Y ++ + P + + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDRD Sbjct: 1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT---IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRD 98
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.181e-25 Identity = 62/101 (61.39%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*D--YYPVQALSSERSSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRD 324 MGL+FTKLFSRLFAKKEMRILMVGLDAA Y ++ + P + + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDR+ Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT---IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 98
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 3.181e-25 Identity = 62/101 (61.39%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*D--YYPVQALSSERSSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRD 324 MGL+FTKLFSRLFAKKEMRILMVGLDAA Y ++ + P + + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDR+ Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT---IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 98
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.181e-25 Identity = 63/101 (62.38%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*D--YYPVQALSSERSSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRD 324 MGLSF KLFSRLFAKKEMRILMVGLDAA Y ++ + P + + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDRD Sbjct: 1 MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT---IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRD 98
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 5.426e-25 Identity = 62/106 (58.49%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*D--YYPVQALSSERSSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRDPCGRS 339 MGLSFTKL RLF+KKEMRILMVGLDAA Y ++ + P + + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDRD G + Sbjct: 1 MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT---IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEA 103
BLAST of CF420877 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.579e-24 Identity = 61/101 (60.40%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 28 MGLSFTKLFSRLFAKKEMRILMVGLDAAW*D--YYPVQALSSERSSPPFLPLDLTWRPLNIRTSAFTVWDVRGQDKIRPLWRHYFQNTQGLIFVXDSNDRD 324 MGL+ +KLFSRLFAKKEMRILMVGLDAA Y ++ + P + + + +FTVWDV GQDKIRPLWRHYFQNTQGLIFV DSNDRD Sbjct: 1 MGLTISKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT---IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRD 98 The following BLAST results are available for this feature:
BLAST of CF420877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CF420877 ID=CF420877; Name=CF420877; organism=Citrus trifoliata; type=EST; length=350bpback to top |