CF421216

Overview
NameCF421216
Unique NameCF421216
TypeEST
OrganismCitrus trifoliata ()
Sequence length246
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF421216 vs. ExPASy Swiss-Prot
Match: AKRP_ARATH (Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.157e-18
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = -1 
Query:   76 AASGEFXFVDALLXHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 246
            AA GEF  VD+LL HN+DINA D  GLT LH+AIIGKKQA+TNYLLRESANPFV+D+
Sbjct:  268 AACGEFYLVDSLLKHNLDINATDVGGLTVLHRAIIGKKQAITNYLLRESANPFVLDD 324
The following BLAST results are available for this feature:
BLAST of CF421216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AKRP_ARATH2.157e-1875.44Ankyrin repeat domain-containing protein, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-221 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-4T3_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF421216 ID=CF421216; Name=CF421216; organism=Citrus trifoliata; type=EST; length=246bp
GAAATTAAATGCAAGTCCAGGATTACATCTGCTACATATATATAATGATC
TAAGGCTAAACTACTTCCACATCACCTCATCAACAACAAAAGGATTTGCA
GATTCTCTCAGAAGATAGTTGGTAACAGCCTGCTTCTTTCCAATTATTGC
TTTGTGAAGTGCAGTAAGACCATCCTTGTCCACAGCATTGATGTCCACAT
TATGTTNCAACAATGCATCAACAAAGNAGAACTCNCCTGATGCAGC
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