CF421336

Overview
NameCF421336
Unique NameCF421336
TypeEST
OrganismCitrus trifoliata ()
Sequence length462
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF421336 vs. ExPASy Swiss-Prot
Match: MDARP_ARATH (Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 5.075e-63
Identity = 89/112 (79.46%), Postives = 99/112 (88.39%), Query Frame = 2
Query:  125 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRIARVEHVDHARRSAQHCAKALLSAQTHTYDYLPYFYSRVFEYE 460
            AVKL DGSTI+ADT+VIGIGAKP + PFE + +N S+GGIQVDG FRT  PGIFAIGDVAAFPLK+YDR+ RVEHVDHARRSAQHC K+LL+A T TYDYLPYFYSRVFEYE
Sbjct:  294 AVKLADGSTIEADTVVIGIGAKPAIGPFETLAMNKSIGGIQVDGLFRTSTPGIFAIGDVAAFPLKIYDRMTRVEHVDHARRSAQHCVKSLLTAHTDTYDYLPYFYSRVFEYE 405          

HSP 2 Score: 71.2478 bits (173), Expect = 5.075e-63
Identity = 33/38 (86.84%), Postives = 37/38 (97.37%), Query Frame = 1
Query:   10 FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 123
            FTPSLAQ+YE+LY+QNGVKFVKGASI NLEAGSDGRV+
Sbjct:  256 FTPSLAQKYEELYRQNGVKFVKGASINNLEAGSDGRVS 293          
BLAST of CF421336 vs. ExPASy Swiss-Prot
Match: MDAR_PEA (Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.744e-30
Identity = 55/113 (48.67%), Postives = 80/113 (70.80%), Query Frame = 2
Query:  128 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRIARVEHVDHARRSAQHCAKALLSA----QTHTYDYLPYFYSRVFE 454
            VKL+DG  ++AD +++G+G +P +S F+   +    GGI+ D  F+T +P ++A+GDVA FPLK+Y+ + RVEHVDHAR+SA+  AKA+ +A        YDYLPYFYSR F+
Sbjct:  241 VKLKDGRVLEADIVIVGVGGRPQISLFKGQ-VEEQHGGIKTDSFFKTSVPDVYAVGDVATFPLKLYNDVRRVEHVDHARKSAEQAAKAIFAADVGKSVEEYDYLPYFYSRSFD 352          

HSP 2 Score: 30.8018 bits (68), Expect = 8.744e-30
Identity = 14/37 (37.84%), Postives = 17/37 (45.95%), Query Frame = 1
Query:   10 FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 120
            FT  +A  YE  Y   G+  +KG       A SDG V
Sbjct:  202 FTSEIAAFYEGYYANKGINIIKGTVAVGFTANSDGEV 238          
BLAST of CF421336 vs. ExPASy Swiss-Prot
Match: MDAR3_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 3 OS=Arabidopsis thaliana GN=At3g52880 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.545e-29
Identity = 55/113 (48.67%), Postives = 80/113 (70.80%), Query Frame = 2
Query:  128 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRIARVEHVDHARRSAQHCAKALLSAQ----THTYDYLPYFYSRVFE 454
            V+L+DG T++AD +++G+GAKP  S F+   +    GGI+ D  F+T +P ++A+GDVA FPLKMY  + RVEHVDH+R+SA+   KA+ +A+       YDYLP+FYSR F+
Sbjct:  242 VQLKDGRTLEADIVIVGVGAKPLTSLFKGQ-VEEDKGGIKTDAFFKTSVPDVYAVGDVATFPLKMYGDVRRVEHVDHSRKSAEQAVKAIKAAEGGAAVEEYDYLPFFYSRSFD 353          

HSP 2 Score: 29.6462 bits (65), Expect = 5.545e-29
Identity = 14/37 (37.84%), Postives = 17/37 (45.95%), Query Frame = 1
Query:   10 FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 120
            FT  +A  YE  Y   GVK +KG       A  +G V
Sbjct:  203 FTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGEV 239          
BLAST of CF421336 vs. ExPASy Swiss-Prot
Match: MDAR1_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=At3g09940 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.074e-28
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 2
Query:  128 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRIARVEHVDHARRSAQHCAKALLSAQ----THTYDYLPYFYSRVFE 454
            VKLEDG T++A+ +V G+GA+P  S F+   L    GGI+ DG F+T +P ++A+GDVA FP+KMY    RVEH D+AR+SA    KA+ + +       YDYLPYFYSR F+
Sbjct:  244 VKLEDGRTLEANIVVAGVGARPATSLFKGQ-LEEEKGGIKTDGFFKTSVPDVYALGDVATFPMKMYGGTRRVEHADNARKSAAQAVKAIKAGEEGKTIPDYDYLPYFYSRFFK 355          

HSP 2 Score: 33.113 bits (74), Expect = 2.074e-28
Identity = 14/37 (37.84%), Postives = 17/37 (45.95%), Query Frame = 1
Query:   10 FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 120
            FT  +A  YE  Y   G+K +KG         SDG V
Sbjct:  205 FTAEIASFYESYYANKGIKIIKGTVATGFSTNSDGEV 241          
BLAST of CF421336 vs. ExPASy Swiss-Prot
Match: MDARS_CUCSA (Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.074e-28
Identity = 54/113 (47.79%), Postives = 80/113 (70.80%), Query Frame = 2
Query:  128 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRIARVEHVDHARRSAQHCAKALLSAQ----THTYDYLPYFYSRVFE 454
            VKL+DG  ++AD +V+G+GA+P  S F+   +    GGI+ D  F+T +P ++A+GDVA FPLK+Y+ + RVEHVDH+R+SA+   KA+ +++       YDYLPYFYSR F+
Sbjct:  242 VKLKDGRVLEADIVVVGVGARPLTSLFKGQIVEEK-GGIKTDEFFKTSVPDVYAVGDVATFPLKLYNELRRVEHVDHSRKSAEQAVKAIKASEEGKAIEEYDYLPYFYSRSFD 353          

HSP 2 Score: 30.4166 bits (67), Expect = 2.074e-28
Identity = 13/37 (35.14%), Postives = 18/37 (48.65%), Query Frame = 1
Query:   10 FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 120
            FTP +A  YE  Y Q G+  +KG         ++G V
Sbjct:  203 FTPEIAAFYEGYYAQKGITIIKGTVAVGFTVDTNGEV 239          
BLAST of CF421336 vs. ExPASy Swiss-Prot
Match: MDAR2_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.008e-27
Identity = 52/112 (46.43%), Postives = 77/112 (68.75%), Query Frame = 2
Query:  125 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRIARVEHVDHARRSAQHCAKALLS-AQTHTYDYLPYFYSRVFEY 457
            AV L+DGS + AD +V+GIG +P  S FE   L    GGI+V+ + ++    ++AIGDVA FP+K++  + R+EHVD AR+SA+H   A++   +T  +DYLP+FYSRVF +
Sbjct:  240 AVNLKDGSHLPADLVVVGIGIRPNTSLFEGQ-LTIEKGGIKVNSRMQSSDSSVYAIGDVATFPVKLFGEMRRLEHVDSARKSARHAVSAIMDPIKTGDFDYLPFFYSRVFAF 350          

HSP 2 Score: 37.7354 bits (86), Expect = 1.008e-27
Identity = 16/37 (43.24%), Postives = 23/37 (62.16%), Query Frame = 1
Query:   10 FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 120
            FTP +A  YE  Y+  GVKF+KG  + + E  S+ +V
Sbjct:  202 FTPKIASLYEDYYRAKGVKFIKGTVLTSFEFDSNKKV 238          
BLAST of CF421336 vs. ExPASy Swiss-Prot
Match: MDAR4_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 4 OS=Arabidopsis thaliana GN=At5g03630 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.483e-27
Identity = 55/113 (48.67%), Postives = 82/113 (72.57%), Query Frame = 2
Query:  128 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRIARVEHVDHARRSAQHCAKALLSAQTHT----YDYLPYFYSRVFE 454
            VKL+DG T++AD +++G+G +P +S F+   +    GG++ DG F+T +P ++AIGDVA FP+K+Y+ + RVEHVDHAR+SA+   KA+ +A+       YDYLPYFYSR F+
Sbjct:  243 VKLKDGRTLEADIVIVGVGGRPIISLFKDQ-VEEEKGGLKTDGFFKTSLPDVYAIGDVATFPMKLYNEMRRVEHVDHARKSAEQAVKAIKAAEEGNSIPEYDYLPYFYSRAFD 354          
BLAST of CF421336 vs. ExPASy Swiss-Prot
Match: MDAR_SOLLC (Monodehydroascorbate reductase OS=Solanum lycopersicum GN=AFRR PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27
Identity = 55/113 (48.67%), Postives = 80/113 (70.80%), Query Frame = 2
Query:  128 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRIARVEHVDHARRSAQHCAKALLSAQ----THTYDYLPYFYSRVFE 454
            VKL+DG  ++AD +V+G+GA+P  + F+   +    GGI+ D  F+T +P ++A+GDVA FPLKMY+ I RVEHVDH+R+SA+   KA+ +++       YDYLPYFYSR F+
Sbjct:  242 VKLKDGRVLEADIVVVGVGARPLTTLFKGQ-VEEEKGGIKTDAFFKTSVPDVYAVGDVATFPLKMYNEIRRVEHVDHSRKSAEQAVKAIFASEQGKSVDEYDYLPYFYSRAFD 353          
BLAST of CF421336 vs. ExPASy Swiss-Prot
Match: MDARF_CUCSA (Monodehydroascorbate reductase, fruit isozyme (Fragments) OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.714e-20
Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 2
Query:  125 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRIARVEHVDHARRSAQHCAKALLSAQTHTYDYLPYFYSRVF 451
            A+KL+DG T+DAD +V+G+G +P VS                   F+T +P ++A+GDVA +PLK+Y+ + RVEHVDHAR S +             YDYLPYFYSR F
Sbjct:   30 AIKLKDGRTLDADIVVVGVGGRPLVS------------------LFKTSIPDVYAVGDVATYPLKLYNELRRVEHVDHARLSIEE------------YDYLPYFYSRTF 108          
The following BLAST results are available for this feature:
BLAST of CF421336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MDARP_ARATH5.075e-6379.46Monodehydroascorbate reductase, chloroplastic OS=A... [more]
MDAR_PEA8.744e-3048.67Monodehydroascorbate reductase OS=Pisum sativum PE... [more]
MDAR3_ARATH5.545e-2948.67Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR1_ARATH2.074e-2849.56Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARS_CUCSA2.074e-2847.79Monodehydroascorbate reductase, seedling isozyme O... [more]
MDAR2_ARATH1.008e-2746.43Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR4_ARATH1.483e-2748.67Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR_SOLLC9.612e-2748.67Monodehydroascorbate reductase OS=Solanum lycopers... [more]
MDARF_CUCSA8.714e-2044.04Monodehydroascorbate reductase, fruit isozyme (Fra... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_118000-345 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-20_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF421336 ID=CF421336; Name=CF421336; organism=Citrus trifoliata; type=EST; length=462bp
GANAGCNTGTTTACTCCTTCACTTGCTCAGAGATATGAACAATTATACCA
ACAGAATGGTGTCAAATTTGTAAAGGGTGCCTCCATAAAAAACTTAGAAG
CTGGTTCTGACGGACGTGTAGCCTGCTGTTAAACTTGAAGATGGATCAAC
CATAGATGCAGACACAATTGTTATTGGTATTGGAGCAAAACCTACTGTTA
GTCCTTTTGAAAGGGTGGGGTTAAACAGTTCTGTGGGTGGAATACAGGTT
GATGGTCAGTTCCGAACAAGAATGCCTGGAATTTTTGCAATTGGAGATGT
TGCAGCATTTCCATTGAAGATGTATGACCGTATAGCACGAGTGGAACATG
TTGATCATGCTCGTCGATCCGCACAGCATTGCGCTAAAGCATTACTTAGT
GCACAAACTCACACATATGATTATCTTCCATATTTTTACTCNAGGGTTTT
TGAGTATGAAGG
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